Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGTTCTCGTCCAATCGAGATTGATTTCGAATTCCTTCAAACCAAAACGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCCAAACCGCAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAGGCGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACACTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTGTGTGGCTTGAAGCTTATTCTGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTACTGAAGCTTACAAGAAATGTACGAACAGCCGGTCAATGAGCCGCCGGGGGATTAGCGGTGGTTCCGCCACAAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTACTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTATTGTTTCAGTGTATATATTATTTTTCTTTTTTGA
mRNA sequence
ATGGCGAGTTCTCGTCCAATCGAGATTGATTTCGAATTCCTTCAAACCAAAACGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCCAAACCGCAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAGGCGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACACTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTGTGTGGCTTGAAGCTTATTCTGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTACTGAAGCTTACAAGAAATGTACGAACAGCCGGTCAATGAGCCGCCGGGGGATTAGCGGTGGTTCCGCCACAAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTACTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTATTGTTTCAGTGTATATATTATTTTTCTTTTTTGA
Coding sequence (CDS)
ATGGCGAGTTCTCGTCCAATCGAGATTGATTTCGAATTCCTTCAAACCAAAACGAACGTACCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCCAAACCGCAATCGCAACCAAGCCCTAGCGCAAGCTTGTTCGAGGCGTCGATGTTGAAATTGCCTTCGCCACCGTGCCGATCGGAGAGTGCTAGGCTTTCCGGCGACTACACTGGGCTGATCACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCCAAGGATTTTGTGTGGCTTGAAGCTTATTCTGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTACTGAAGCTTACAAGAAATGTACGAACAGCCGGTCAATGAGCCGCCGGGGGATTAGCGGTGGTTCCGCCACAAATGGTGTTAAACGTCCTAATATTATAAGAAGAGTACTTTTTTCGCTATCACGTAAGTGCTGCGCTTCATCTCTATTTTATTGTTTCAGTGTATATATTATTTTTCTTTTTTGA
Protein sequence
MASSRPIEIDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGLITYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRSMSRRGISGGSATNGVKRPNIIRRVLFSLSRKCCASSLFYCFSVYIIFLF
Homology
BLAST of PI0000603 vs. ExPASy TrEMBL
Match:
A0A0A0KZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 4.9e-78
Identity = 153/171 (89.47%), Postives = 158/171 (92.40%), Query Frame = 0
Query: 1 MASSRPIEIDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPSASLF--EASMLKLPSPPCRS 60
MASSRPIEIDFEFL TKTNVPFSWEAKPGVPKPQSQPSP+ASLF EA+MLKLPSPPCRS
Sbjct: 1 MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60
Query: 61 ESARLSGDYTGLITYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
ESARLSGDY+GLITYSPPRCRAESARMAKDF+WLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61 ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
Query: 121 FTEAYKKCTNSRSMSRRGISGGSATNGVKRPNIIRRVLFSLSRKCCASSLF 170
F EAYKKC NSRS I+G SATNG KRPNIIRRVLFSLSRKC ASSLF
Sbjct: 121 FVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRKCFASSLF 166
BLAST of PI0000603 vs. ExPASy TrEMBL
Match:
A0A5D3D9E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002440 PE=4 SV=1)
HSP 1 Score: 297.0 bits (759), Expect = 5.4e-77
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
Query: 19 NVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGLITYSPPRC 78
NVPFSWEAKPGVPKPQSQPSPSASLFE SMLKLPSPPCRSESARLSGDY+GLITYSPPRC
Sbjct: 2 NVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPRC 61
Query: 79 RAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRSMSRRGIS 138
RAESARMAKDF+WLEAYSDGSASSFGFGCCKSDDSKKTDPF EAYKKCTNSRSMS RGI+
Sbjct: 62 RAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGIT 121
Query: 139 GGSATNGVKRPNIIRRVLFSLSRKCCASSLFY 171
GGSATNGVKRPNIIRRVLFSLSRKCCASSLF+
Sbjct: 122 GGSATNGVKRPNIIRRVLFSLSRKCCASSLFF 153
BLAST of PI0000603 vs. ExPASy TrEMBL
Match:
A0A067LAQ4 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1)
HSP 1 Score: 60.8 bits (146), Expect = 6.5e-06
Identity = 50/155 (32.26%), Postives = 69/155 (44.52%), Query Frame = 0
Query: 16 TKTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGL----I 75
+K NVPFSWE KPGV K + + + + ++KLP PPC ES R+S +
Sbjct: 9 SKGNVPFSWEKKPGVSKVNAMINNNQEQ-DQIVVKLPPPPCPIESPRVSAHEISIPLPPC 68
Query: 76 TYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRS 135
T+ PP +S K DPF AYK+CT S +
Sbjct: 69 TFQPP-------------------------------SRSSSRKWDDPFLAAYKECTKSST 128
Query: 136 MSRRGISGGSATNGVKRPNIIRRVLFSLSRKCCAS 167
S+ ++GGSA G R +R+ +F LS K S
Sbjct: 129 RSKAKVAGGSA--GFSRSG-LRKGMFKLSCKSSCS 128
BLAST of PI0000603 vs. ExPASy TrEMBL
Match:
A0A1R3HKK6 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28461 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 5.5e-05
Identity = 51/151 (33.77%), Postives = 70/151 (46.36%), Query Frame = 0
Query: 14 LQTKTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGLITY 73
+ ++ NVPFSWE KPGV K SQ F + KLP PPC E+AR+S +
Sbjct: 6 VHSQGNVPFSWENKPGVCKMTSQDCLKEDFF---LQKLPPPPCPPETARVSISNSIQDNK 65
Query: 74 SPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRSMS 133
PP A+ S SS G KSD DPF AYK+CT S +
Sbjct: 66 IPPP--------------PGAFQPPSRSSSRRGLKKSD-----DPFLAAYKECTKSTNKG 125
Query: 134 R--RGISGGSATNGVKRPNIIRRVLFSLSRK 163
+ + ++GG + N +++ +FS S K
Sbjct: 126 KLAKNVNGGGSGN-------LKKGVFSFSCK 127
BLAST of PI0000603 vs. ExPASy TrEMBL
Match:
A0A2C9VZY0 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G183500 PE=4 SV=1)
HSP 1 Score: 57.8 bits (138), Expect = 5.5e-05
Identity = 55/146 (37.67%), Postives = 66/146 (45.21%), Query Frame = 0
Query: 17 KTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGLITYSPP 76
K NVPFSWE KPGV K SQ S EA +KLP PPC E+ + T I P
Sbjct: 9 KGNVPFSWEKKPGVSKAISQMFHS----EADFVKLPPPPCLIENQSPARVSTHDIQIPLP 68
Query: 77 RCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRSMSRRG 136
C + S SS G K K+ DPF AYK+CT S S S +
Sbjct: 69 PC---------------TFQPPSRSSSRKGGLK----KQEDPFLAAYKECTKSTSDSNKK 126
Query: 137 ISGGSATNGVKRPNIIRRVLFSLSRK 163
+GG V +R+ +FSLS K
Sbjct: 129 -TGGKLCRNVG----LRKGMFSLSCK 126
BLAST of PI0000603 vs. NCBI nr
Match:
KAA0064469.1 (hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK20119.1 hypothetical protein E5676_scaffold134G002440 [Cucumis melo var. makuwa])
HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
Query: 19 NVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGLITYSPPRC 78
NVPFSWEAKPGVPKPQSQPSPSASLFE SMLKLPSPPCRSESARLSGDY+GLITYSPPRC
Sbjct: 2 NVPFSWEAKPGVPKPQSQPSPSASLFETSMLKLPSPPCRSESARLSGDYSGLITYSPPRC 61
Query: 79 RAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRSMSRRGIS 138
RAESARMAKDF+WLEAYSDGSASSFGFGCCKSDDSKKTDPF EAYKKCTNSRSMS RGI+
Sbjct: 62 RAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRGIT 121
Query: 139 GGSATNGVKRPNIIRRVLFSLSRKCCASSLFY 171
GGSATNGVKRPNIIRRVLFSLSRKCCASSLF+
Sbjct: 122 GGSATNGVKRPNIIRRVLFSLSRKCCASSLFF 153
BLAST of PI0000603 vs. NCBI nr
Match:
XP_004141298.1 (uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetical protein Csa_012140 [Cucumis sativus])
HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 147/166 (88.55%), Postives = 152/166 (91.57%), Query Frame = 0
Query: 1 MASSRPIEIDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPSASLF--EASMLKLPSPPCRS 60
MASSRPIEIDFEFL TKTNVPFSWEAKPGVPKPQSQPSP+ASLF EA+MLKLPSPPCRS
Sbjct: 1 MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60
Query: 61 ESARLSGDYTGLITYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
ESARLSGDY+GLITYSPPRCRAESARMAKDF+WLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61 ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
Query: 121 FTEAYKKCTNSRSMSRRGISGGSATNGVKRPNIIRRVLFSLSRKCC 165
F EAYKKC NSRS I+G SATNG KRPNIIRRVLFSLSR C
Sbjct: 121 FVEAYKKCRNSRS-----INGASATNGAKRPNIIRRVLFSLSRFWC 161
BLAST of PI0000603 vs. NCBI nr
Match:
KAG6608406.1 (hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 229.2 bits (583), Expect = 2.9e-56
Identity = 118/166 (71.08%), Postives = 130/166 (78.31%), Query Frame = 0
Query: 2 ASSRPIEIDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESA 61
+SS P++ DFE LQT+TNVPFSWEAKPGVPK QS SP+ S FE S LKLPSPP RSESA
Sbjct: 6 SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESA 65
Query: 62 RLSGDYTGLITYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTE 121
RL DY I S P RA+SARMAK+ +WL+AYSD SSFGFGCCK D K+TDPF E
Sbjct: 66 RLPDDYGEAIPCSSP--RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVE 125
Query: 122 AYKKCTNSRSMSRRGISGGSATNGVKRPNIIRRVLFSLSRKCCASS 168
AYKKCTN S +RR I GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 126 AYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 169
BLAST of PI0000603 vs. NCBI nr
Match:
KAG7037747.1 (hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 229.2 bits (583), Expect = 2.9e-56
Identity = 118/166 (71.08%), Postives = 130/166 (78.31%), Query Frame = 0
Query: 2 ASSRPIEIDFEFLQTKTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESA 61
+SS P++ DFE LQT+TNVPFSWEAKPGVPK QS SP+ S FE S LKLPSPP RSESA
Sbjct: 6 SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISALKLPSPPYRSESA 65
Query: 62 RLSGDYTGLITYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTE 121
RL DY I S P RA+SARMAK+ +WL+AYSD SSFGFGCCK D K+TDPF E
Sbjct: 66 RLPDDYGEAIPCSSP--RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPFVE 125
Query: 122 AYKKCTNSRSMSRRGISGGSATNGVKRPNIIRRVLFSLSRKCCASS 168
AYKKCTN S +RR I GGSATNGVKRP I RR+LFSLSRKCCASS
Sbjct: 126 AYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCCASS 169
BLAST of PI0000603 vs. NCBI nr
Match:
KDP41585.1 (hypothetical protein JCGZ_15992 [Jatropha curcas])
HSP 1 Score: 60.8 bits (146), Expect = 1.3e-05
Identity = 50/155 (32.26%), Postives = 69/155 (44.52%), Query Frame = 0
Query: 16 TKTNVPFSWEAKPGVPKPQSQPSPSASLFEASMLKLPSPPCRSESARLSGDYTGL----I 75
+K NVPFSWE KPGV K + + + + ++KLP PPC ES R+S +
Sbjct: 9 SKGNVPFSWEKKPGVSKVNAMINNNQEQ-DQIVVKLPPPPCPIESPRVSAHEISIPLPPC 68
Query: 76 TYSPPRCRAESARMAKDFVWLEAYSDGSASSFGFGCCKSDDSKKTDPFTEAYKKCTNSRS 135
T+ PP +S K DPF AYK+CT S +
Sbjct: 69 TFQPP-------------------------------SRSSSRKWDDPFLAAYKECTKSST 128
Query: 136 MSRRGISGGSATNGVKRPNIIRRVLFSLSRKCCAS 167
S+ ++GGSA G R +R+ +F LS K S
Sbjct: 129 RSKAKVAGGSA--GFSRSG-LRKGMFKLSCKSSCS 128
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KZZ9 | 4.9e-78 | 89.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1 | [more] |
A0A5D3D9E3 | 5.4e-77 | 95.39 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A067LAQ4 | 6.5e-06 | 32.26 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15992 PE=4 SV=1 | [more] |
A0A1R3HKK6 | 5.5e-05 | 33.77 | Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_28461 PE=4 SV=1 | [more] |
A0A2C9VZY0 | 5.5e-05 | 37.67 | Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G183500 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |
KAA0064469.1 | 1.1e-76 | 95.39 | hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK201... | [more] |
XP_004141298.1 | 2.3e-74 | 88.55 | uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetica... | [more] |
KAG6608406.1 | 2.9e-56 | 71.08 | hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7037747.1 | 2.9e-56 | 71.08 | hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KDP41585.1 | 1.3e-05 | 32.26 | hypothetical protein JCGZ_15992 [Jatropha curcas] | [more] |
Match Name | E-value | Identity | Description | |