PI0000467 (gene) Melon (PI 482460) v1

Overview


Name	PI0000467
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr06: 24124693 .. 24125661 (+)
RNA-Seq Expression	PI0000467
Synteny	PI0000467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGCACCCTGAAGGTATCAACAGGTGCTACCAAAGAAGCTATGGTCGTTACTACGGCCCATTTAAAGTTTGTTCCTAAAGAGAAGAATATGGAAAAACGCCAAGATGAAGGTGAAAAAAGACGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCCAGACTCTGACTTACCTGATATGTTAGAGCAATTATTGGAAAAACAACCCATTCAACTTCCTGAATGTAAACAACCAGCAGAAATTGGGAAGGTAAATGATCCTAATTACTGCAAATATCATCGAGTTATCAGCCACCTTGTAGAGAAATGCTTCATGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAGAAAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATACTGCAGTAATGAGTCATGCAGAGGATCGATCACTTGCTACAGGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGGCATCCGAACTGTTCACCCAAAAGAAGAAGAAAAGCACGTGGGGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGAAAGAATGCAAGGAAGTTTCAACCAATCAGCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAATCGTTTCGTGCCATGTTGTCAGTACAACTGAGGATGACGCTTCTCCCTCAAATTCTACAGAAGTCAGTACAATTGGGGATGACATTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCATGA

mRNA sequence

ATGAAGAGCACCCTGAAGGTATCAACAGGTGCTACCAAAGAAGCTATGGTCGTTACTACGGCCCATTTAAAGTTTGTTCCTAAAGAGAAGAATATGGAAAAACGCCAAGATGAAGGTGAAAAAAGACGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCCAGACTCTGACTTACCTGATATGTTAGAGCAATTATTGGAAAAACAACCCATTCAACTTCCTGAATGTAAACAACCAGCAGAAATTGGGAAGGTAAATGATCCTAATTACTGCAAATATCATCGAGTTATCAGCCACCTTGTAGAGAAATGCTTCATGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAGAAAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATACTGCAGTAATGAGTCATGCAGAGGATCGATCACTTGCTACAGGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGGCATCCGAACTGTTCACCCAAAAGAAGAAGAAAAGCACGTGGGGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGAAAGAATGCAAGGAAGTTTCAACCAATCAGCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAATCGTTTCGTGCCATGTTGTCAGTACAACTGAGGATGACGCTTCTCCCTCAAATTCTACAGAAGTCAGTACAATTGGGGATGACATTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCATGA

Coding sequence (CDS)

ATGAAGAGCACCCTGAAGGTATCAACAGGTGCTACCAAAGAAGCTATGGTCGTTACTACGGCCCATTTAAAGTTTGTTCCTAAAGAGAAGAATATGGAAAAACGCCAAGATGAAGGTGAAAAAAGACGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCCAGACTCTGACTTACCTGATATGTTAGAGCAATTATTGGAAAAACAACCCATTCAACTTCCTGAATGTAAACAACCAGCAGAAATTGGGAAGGTAAATGATCCTAATTACTGCAAATATCATCGAGTTATCAGCCACCTTGTAGAGAAATGCTTCATGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAGAAAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATACTGCAGTAATGAGTCATGCAGAGGATCGATCACTTGCTACAGGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGGCATCCGAACTGTTCACCCAAAAGAAGAAGAAAAGCACGTGGGGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGAAAGAATGCAAGGAAGTTTCAACCAATCAGCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTTCCATTGGAAATCGTTTCGTGCCATGTTGTCAGTACAACTGAGGATGACGCTTCTCCCTCAAATTCTACAGAAGTCAGTACAATTGGGGATGACATTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCATGA

Protein sequence

MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSDLPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALDKKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHPKEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPISKEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKSAEATTKLEELPSMDINDLLSLP

Homology

[Close]

BLAST of PI0000467 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 9.9e-114
Identity = 230/321 (71.65%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST K   G TKEAMVV+T  LK V KEK MEKRQDEGEKRRPTLKERQEKVYPFPDSD
Sbjct: 383 VKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSD 442

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 443 LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 502

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R  A GSLIQFGSLEPVVIYSSPE LQ N  R   P
Sbjct: 503 KKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQNNDFRADGP 562

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVTRRKK KQ+FS+KES  YR Y+ KGKSQRR TRKN RKF PI 
Sbjct: 563 KEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPII 622

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+DA PSN               +
Sbjct: 623 EESEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------A 682

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 683 MEETPKPEDLLPLGINDLLTL 688

[Close]

BLAST of PI0000467 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 9.9e-114
Identity = 230/321 (71.65%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST K   G TKEAMVV+T  LK V KEK MEKRQDEGEKRRPTLKERQEKVYPFPDSD
Sbjct: 361 VKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSD 420

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 421 LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 480

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R  A GSLIQFGSLEPVVIYSSPE LQ N  R   P
Sbjct: 481 KKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQNNDFRADGP 540

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVTRRKK KQ+FS+KES  YR Y+ KGKSQRR TRKN RKF PI 
Sbjct: 541 KEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPII 600

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+DA PSN               +
Sbjct: 601 EESEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------A 660

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 661 MEETPKPEDLLPLGINDLLTL 666

[Close]

BLAST of PI0000467 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.9e-112
Identity = 228/321 (71.03%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST KV  GATKEAMVV+T  LK V KEK MEKRQDEG+KRRPTLKERQEK+YPFPDSD
Sbjct: 247 VKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRPTLKERQEKIYPFPDSD 306

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+GKVNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 307 LPDMLDQLLEKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 366

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R    GSLIQFGSLE +VIYSSPE LQ N  RT  P
Sbjct: 367 KKIELELDDVAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIYSSPEDLQNNDFRTDSP 426

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVTRRKK KQ+FS+KES  YR Y+ KGKSQRR TRKN RKF PI 
Sbjct: 427 KEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKSQRRNTRKNLRKFLPII 486

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EI SCH  STTE+DA PSN               +
Sbjct: 487 EESEGLSRPRRPIILKDFFPKNFPMEIFSCHTTSTTEEDAFPSN---------------A 546

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 547 MEETPKPEDLLPLGINDLLTL 552

[Close]

BLAST of PI0000467 vs. ExPASy TrEMBL
Match: A0A5A7VE63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00390 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.6e-111
Identity = 227/321 (70.72%), Postives = 252/321 (78.50%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST KV  GATKEAMVV+T  LK V KEK MEK QDEGEKRRPTLKERQEKVYPFPDSD
Sbjct: 236 VKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKHQDEGEKRRPTLKERQEKVYPFPDSD 295

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 296 LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 355

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL++DDVAQ NH AV+  ++ R    GSLIQFGSLEPVVIYSS E LQ N  RT  P
Sbjct: 356 KKIELEIDDVAQANHAAVIIQSDSRLSVIGSLIQFGSLEPVVIYSSLEDLQNNDFRTDSP 415

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR T+KN RKF PI 
Sbjct: 416 KEEEKQVDNVEEGWTLVTHRKKRKQSFSQKESGSYRTYRSKGKSQRRNTKKNLRKFLPII 475

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+DA PSN               S
Sbjct: 476 EESEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPSN---------------S 535

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 536 MEETPKPEDLLPLGINDLLTL 541

[Close]

BLAST of PI0000467 vs. ExPASy TrEMBL
Match: A0A5D3CUG5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G001100 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.6e-110
Identity = 225/321 (70.09%), Postives = 252/321 (78.50%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST KV  GATKEAMVV+T  LK V KEK +EKRQDEGEKRRPTLKERQEK+YPFPDSD
Sbjct: 331 VKSTQKVLKGATKEAMVVSTTPLKLVSKEKKIEKRQDEGEKRRPTLKERQEKIYPFPDSD 390

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           +PDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYH VISH VEKCF+LKELILKLALD
Sbjct: 391 VPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHWVISHPVEKCFVLKELILKLALD 450

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R  A GSLIQFGSLEPVVIYSS E LQ N  R   P
Sbjct: 451 KKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSLEDLQNNDFRADGP 510

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLV RRKK KQ+FS+KES  YR YK KGKS+RR TRKN RKF PI 
Sbjct: 511 KEEEKQVDNVEEGWTLVARRKKRKQSFSQKESGSYRTYKSKGKSERRNTRKNLRKFLPII 570

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           KE E L RPR+ I LK+FFP+NFP+EIVSCH  STTE+DA PSN               +
Sbjct: 571 KESEGLSRPRRSIILKNFFPKNFPMEIVSCHTTSTTEEDAFPSN---------------A 630

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 631 MEETPKPEDLLPLSINDLLTL 636

[Close]

BLAST of PI0000467 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 419.9 bits (1078), Expect = 2.0e-113
Identity = 230/321 (71.65%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST K   G TKEAMVV+T  LK V KEK MEKRQDEGEKRRPTLKERQEKVYPFPDSD
Sbjct: 361 VKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSD 420

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 421 LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 480

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R  A GSLIQFGSLEPVVIYSSPE LQ N  R   P
Sbjct: 481 KKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQNNDFRADGP 540

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVTRRKK KQ+FS+KES  YR Y+ KGKSQRR TRKN RKF PI 
Sbjct: 541 KEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPII 600

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+DA PSN               +
Sbjct: 601 EESEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------A 660

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 661 MEETPKPEDLLPLGINDLLTL 666

[Close]

BLAST of PI0000467 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 419.9 bits (1078), Expect = 2.0e-113
Identity = 230/321 (71.65%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST K   G TKEAMVV+T  LK V KEK MEKRQDEGEKRRPTLKERQEKVYPFPDSD
Sbjct: 383 VKSTQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSD 442

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 443 LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 502

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R  A GSLIQFGSLEPVVIYSSPE LQ N  R   P
Sbjct: 503 KKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSPEDLQNNDFRADGP 562

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVTRRKK KQ+FS+KES  YR Y+ KGKSQRR TRKN RKF PI 
Sbjct: 563 KEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPII 622

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+DA PSN               +
Sbjct: 623 EESEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------A 682

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 683 MEETPKPEDLLPLGINDLLTL 688

[Close]

BLAST of PI0000467 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 415.6 bits (1067), Expect = 3.9e-112
Identity = 228/321 (71.03%), Postives = 254/321 (79.13%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST KV  GATKEAMVV+T  LK V KEK MEKRQDEG+KRRPTLKERQEK+YPFPDSD
Sbjct: 247 VKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRPTLKERQEKIYPFPDSD 306

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+GKVNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 307 LPDMLDQLLEKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 366

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R    GSLIQFGSLE +VIYSSPE LQ N  RT  P
Sbjct: 367 KKIELELDDVAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIYSSPEDLQNNDFRTDSP 426

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVTRRKK KQ+FS+KES  YR Y+ KGKSQRR TRKN RKF PI 
Sbjct: 427 KEEEKQVDNVEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKSQRRNTRKNLRKFLPII 486

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EI SCH  STTE+DA PSN               +
Sbjct: 487 EESEGLSRPRRPIILKDFFPKNFPMEIFSCHTTSTTEEDAFPSN---------------A 546

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 547 MEETPKPEDLLPLGINDLLTL 552

[Close]

BLAST of PI0000467 vs. NCBI nr
Match: KAA0065377.1 (uncharacterized protein E6C27_scaffold17G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 412.5 bits (1059), Expect = 3.3e-111
Identity = 227/321 (70.72%), Postives = 252/321 (78.50%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST KV  GATKEAMVV+T  LK V KEK MEK QDEGEKRRPTLKERQEKVYPFPDSD
Sbjct: 236 VKSTQKVLKGATKEAMVVSTTPLKLVSKEKKMEKHQDEGEKRRPTLKERQEKVYPFPDSD 295

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           LPDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYHRVISH VEKCF+LKELILKLALD
Sbjct: 296 LPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALD 355

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL++DDVAQ NH AV+  ++ R    GSLIQFGSLEPVVIYSS E LQ N  RT  P
Sbjct: 356 KKIELEIDDVAQANHAAVIIQSDSRLSVIGSLIQFGSLEPVVIYSSLEDLQNNDFRTDSP 415

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLVT RKK KQ+FS+KES  YR Y+ KGKSQRR T+KN RKF PI 
Sbjct: 416 KEEEKQVDNVEEGWTLVTHRKKRKQSFSQKESGSYRTYRSKGKSQRRNTKKNLRKFLPII 475

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           +E E L RPR+PI LKDFFP+NFP+EIVSCH  STTE+DA PSN               S
Sbjct: 476 EESEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPSN---------------S 535

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 536 MEETPKPEDLLPLGINDLLTL 541

[Close]

BLAST of PI0000467 vs. NCBI nr
Match: KAA0054202.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15060.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 407.1 bits (1045), Expect = 1.4e-109
Identity = 225/321 (70.09%), Postives = 252/321 (78.50%), Query Frame = 0


Query: 1   MKSTLKVSTGATKEAMVVTTAHLKFVPKEKNMEKRQDEGEKRRPTLKERQEKVYPFPDSD 60
           +KST KV  GATKEAMVV+T  LK V KEK +EKRQDEGEKRRPTLKERQEK+YPFPDSD
Sbjct: 331 VKSTQKVLKGATKEAMVVSTTPLKLVSKEKKIEKRQDEGEKRRPTLKERQEKIYPFPDSD 390

Query: 61  LPDMLEQLLEKQPIQLPECKQPAEIGKVNDPNYCKYHRVISHLVEKCFMLKELILKLALD 120
           +PDML+QLLEKQ IQLPECK+PAE+G+VNDPNYCKYH VISH VEKCF+LKELILKLALD
Sbjct: 391 VPDMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHWVISHPVEKCFVLKELILKLALD 450

Query: 121 KKIELDLDDVAQTNHTAVMSHAEDRSLATGSLIQFGSLEPVVIYSSPEVLQKNGIRTVHP 180
           KKIEL+LDDVAQTNH AV+  ++ R  A GSLIQFGSLEPVVIYSS E LQ N  R   P
Sbjct: 451 KKIELELDDVAQTNHAAVIIQSDSRLSAIGSLIQFGSLEPVVIYSSLEDLQNNDFRADGP 510

Query: 181 KEEEKHVGNADEGWTLVTRRKKHKQNFSKKESHLYREYKRKGKSQRRKTRKNARKFQPIS 240
           KEEEK V N +EGWTLV RRKK KQ+FS+KES  YR YK KGKS+RR TRKN RKF PI 
Sbjct: 511 KEEEKQVDNVEEGWTLVARRKKRKQSFSQKESGSYRTYKSKGKSERRNTRKNLRKFLPII 570

Query: 241 KEGEELPRPRQPITLKDFFPENFPLEIVSCHVVSTTEDDASPSNSTEVSTIGDDISPSKS 300
           KE E L RPR+ I LK+FFP+NFP+EIVSCH  STTE+DA PSN               +
Sbjct: 571 KESEGLSRPRRSIILKNFFPKNFPMEIVSCHTTSTTEEDAFPSN---------------A 630

Query: 301 AEATTKLEELPSMDINDLLSL 322
            E T K E+L  + INDLL+L
Sbjct: 631 MEETPKPEDLLPLSINDLLTL 636

The following BLAST results are available for this feature:

BLAST of PI0000467 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZU9	9.9e-114	71.65	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	9.9e-114	71.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UJR2	1.9e-112	71.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7VE63	1.6e-111	70.72	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CUG5	6.6e-110	70.09	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of PI0000467 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98225.1	2.0e-113	71.65	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	2.0e-113	71.65	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]
KAA0053731.1	3.9e-112	71.03	uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]	[more]
KAA0065377.1	3.3e-111	70.72	uncharacterized protein E6C27_scaffold17G00390 [Cucumis melo var. makuwa]	[more]
KAA0054202.1	1.4e-109	70.09	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK15060.1 ty3-gyp...	[more]

BLAST of PI0000467 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000467.1	PI0000467.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity