PI0000435 (gene) Melon (PI 482460) v1

Overview
NamePI0000435
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 5118563 .. 5119444 (-)
RNA-Seq ExpressionPI0000435
SyntenyPI0000435
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGATTCTTTCCTCGATTCGATGGAAACACCCAAGGGCGCCTTGGTTTTCCCATCCACCATTGAAGCTCTCTGTCTTCAGCCGGTGCCATCTTTGGCAGCCTTACCACAGACCCCAATCCTTGGAGGTTTCTGTAACCAGGTGAGGCTCAATCGCATTATCACTCTTCACCAAAACAAGGAAGAGGGAAGACGCCTGAAAACTCTAGGCAAGGAGGAAGAAACTCACTAGGGCCACGAGGAGAAAGAAACGATAGGCCACAACAATGCCAAAGAGATCCCACCACCCCAAACCATCAAGAGGAAGGTGAAACCGTAGGGGGGTCCATTAAGCTCGCATCCAAAACGACCAAGATTTGATGATACCACCCAGCCTAAGCCCCTCGCCATCAGTCCGCCACCGCCTTCTGAAAATTTCAAATCCCTCAGTCCTCCCAAAATGCCTTCTCCCCAATCCTCCCCACATCCTCACTAGTCAACTTCCACACTCTCCAATCCATCAGGGCGGTGATTACATGTGTTGTCCATCATCATCTCCCCACTCTCCAAGTCTTCAACCTCACCTCGTCGATCATCCCTTCTACGACTTGGCCTCAAGAAGCCCACACTTGACCTGAAGGGCTTTGTTGACGAAGAAGATGTCCTCATTCTGCAGAACCCTAAGCCACGCCATCCTCCCTTTAACACTGCTATTCATATTTTTGAGGAAGCAGATGTGGACATCGCGACCGCAAACACTACTCAGTCACTGCTTGAGTTTGAATCCAGAGCCAATGTTCATGGCCTACTCACCAAGGTCAAGTTTGTAGCCATTAGTGCAGCTGGCGAGACCAGGTCCTCTACACAGCACAATGAGAACCATCCTAAGGCCACTGCGTAG

mRNA sequence

ATGAGCGATTCTTTCCTCGATTCGATGGAAACACCCAAGGGCGCCTTGGTTTTCCCATCCACCATTGAAGCTCTCTGTCTTCAGCCGGTGCCATCTTTGGCAGCCTTACCACAGACCCCAATCCTTGGAGGTTTCTGTAACCAGTCTTCAACCTCACCTCGTCGATCATCCCTTCTACGACTTGGCCTCAAGAAGCCCACACTTGACCTGAAGGGCTTTGTTGACGAAGAAGATGTCCTCATTCTGCAGAACCCTAAGCCACGCCATCCTCCCTTTAACACTGCTATTCATATTTTTGAGGAAGCAGATGTGGACATCGCGACCGCAAACACTACTCAGTCACTGCTTGAGTTTGAATCCAGAGCCAATGTTCATGGCCTACTCACCAAGGTCAAGTTTGTAGCCATTAGTGCAGCTGGCGAGACCAGGTCCTCTACACAGCACAATGAGAACCATCCTAAGGCCACTGCGTAG

Coding sequence (CDS)

ATGAGCGATTCTTTCCTCGATTCGATGGAAACACCCAAGGGCGCCTTGGTTTTCCCATCCACCATTGAAGCTCTCTGTCTTCAGCCGGTGCCATCTTTGGCAGCCTTACCACAGACCCCAATCCTTGGAGGTTTCTGTAACCAGTCTTCAACCTCACCTCGTCGATCATCCCTTCTACGACTTGGCCTCAAGAAGCCCACACTTGACCTGAAGGGCTTTGTTGACGAAGAAGATGTCCTCATTCTGCAGAACCCTAAGCCACGCCATCCTCCCTTTAACACTGCTATTCATATTTTTGAGGAAGCAGATGTGGACATCGCGACCGCAAACACTACTCAGTCACTGCTTGAGTTTGAATCCAGAGCCAATGTTCATGGCCTACTCACCAAGGTCAAGTTTGTAGCCATTAGTGCAGCTGGCGAGACCAGGTCCTCTACACAGCACAATGAGAACCATCCTAAGGCCACTGCGTAG

Protein sequence

MSDSFLDSMETPKGALVFPSTIEALCLQPVPSLAALPQTPILGGFCNQSSTSPRRSSLLRLGLKKPTLDLKGFVDEEDVLILQNPKPRHPPFNTAIHIFEEADVDIATANTTQSLLEFESRANVHGLLTKVKFVAISAAGETRSSTQHNENHPKATA
Homology
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BLAST of PI0000435 vs. ExPASy TrEMBL
Match: A0A5D3DF10 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00320 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.0e-04
Identity = 24/41 (58.54%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 9   METPKGALVFPSTIEALCLQPVPSLAALPQTPILGGFCNQS 50
           ME PKG + FPST+E LCL+ +PSLA  PQ  IL G CN++
Sbjct: 79  MEIPKGVMPFPSTVEKLCLRIIPSLATCPQEVILDGVCNEA 119

The following BLAST results are available for this feature:
BLAST of PI0000435 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000435 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DF107.0e-0458.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0000435 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0000435 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000435.1PI0000435.1mRNA