PI0000374 (gene) Melon (PI 482460) v1

Overview


Name	PI0000374
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Kinetochore protein NDC80-like protein
Location	chr06: 8761786 .. 8762910 (-)
RNA-Seq Expression	PI0000374
Synteny	PI0000374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGAACTGGCCGCCGCCGTCCAAAGGCGTCTTTCAATCCTCCCCCACCCCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGCAGCCGCCCTTCTTCCATCGGAATGTCTCGTCCCCCCGCCGCCTCCATCGACATGTACAAAGAACGAGCCGTTCAAATTTCCACTGTCAACACCATCAATTCCTCTCTCAAGGACCTCTTTTCTCACTCCTTTAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTCACTGAAACTATTAATTTGCTTCTTCAATGTCTCGATTATCCTCCCACTAAACTTGAGGATGATCTCCCCATCCTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAATAAGAACATCCTCAAGAACCCCCCTGCTCCTCATCAGCGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTTCAGGTTGCTGTTTATAACTATAACCTAGCAAATGATTCGAATCCCATTTTCACGGGTCACGATGTGAATATACATGTGCTGAATAGCTATTTGCATTATATGCGTGGGGATGATGAGTCGGTGGAGGTTTTAGAATTTACAATTAAGGTACTGTATCCAACATTTACTTAATCTGATCTTTTTTGAATTATAGTTATTGCTTTGCAAGAATGTAGTTTATTTTTGTAGTTTCTTGATTTGATTGTTAGTAATCCATTTCTTCTCCTCTTATTTTATTTTTGTAGTTTCTTGAATAGCTATTTGCATTATATGCGTGGGGATGATGATTCGGTGGAGGTTTTAGAATTTACAATTAAGGTACTGTATCCAACATTTACTTAATCTGATCTTTTTTGAATTATAGTTATTGCTTTGCAAGAATGTAGTTTATTTTTGTAGTTTCTTGATTTGATTGTTAGTAATCCATTTCTTCTCCTCTTATTTTATTTTTGTGAATTTCACACCTTATGGTACTTATCCATCTCAAATGACACCTATGAGTATAAAGGGTTATTCAATAACAAAATTCAATAGCCCCTTGTACTAATGGGAACCTTTTTCTTACCAACTCAGCATAATTACTTTGTTAATACAACTTCATTTGGTTGTTATTAGATTAAAGCTCGATAA

mRNA sequence

ATGAAGGGAACTGGCCGCCGCCGTCCAAAGGCGTCTTTCAATCCTCCCCCACCCCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGCAGCCGCCCTTCTTCCATCGGAATGTCTCGTCCCCCCGCCGCCTCCATCGACATGTACAAAGAACGAGCCGTTCAAATTTCCACTGTCAACACCATCAATTCCTCTCTCAAGGACCTCTTTTCTCACTCCTTTAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTCACTGAAACTATTAATTTGCTTCTTCAATGTCTCGATTATCCTCCCACTAAACTTGAGGATGATCTCCCCATCCTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAATAAGAACATCCTCAAGAACCCCCCTGCTCCTCATCAGCGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTTCAGAATTTACAATTAAGTTTCTTGAATAGCTATTTGCATTATATGCGTGGGGATGATGATTCGGTGGAGGTTTTAGAATTTACAATTAAGATTAAAGCTCGATAA

Coding sequence (CDS)

ATGAAGGGAACTGGCCGCCGCCGTCCAAAGGCGTCTTTCAATCCTCCCCCACCCCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGCAGCCGCCCTTCTTCCATCGGAATGTCTCGTCCCCCCGCCGCCTCCATCGACATGTACAAAGAACGAGCCGTTCAAATTTCCACTGTCAACACCATCAATTCCTCTCTCAAGGACCTCTTTTCTCACTCCTTTAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTCACTGAAACTATTAATTTGCTTCTTCAATGTCTCGATTATCCTCCCACTAAACTTGAGGATGATCTCCCCATCCTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAATAAGAACATCCTCAAGAACCCCCCTGCTCCTCATCAGCGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTTCAGAATTTACAATTAAGTTTCTTGAATAGCTATTTGCATTATATGCGTGGGGATGATGATTCGGTGGAGGTTTTAGAATTTACAATTAAGATTAAAGCTCGATAA

Protein sequence

MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQISTVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKSLGYPFKINKNILKNPPAPHQRYQILALLHWLVQNLQLSFLNSYLHYMRGDDDSVEVLEFTIKIKAR

Homology

[Close]

BLAST of PI0000374 vs. ExPASy Swiss-Prot
Match: Q9M1G5 (Kinetochore protein NDC80 homolog OS=Arabidopsis thaliana OX=3702 GN=NDC80 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.2e-21
Identity = 72/204 (35.29%), Postives = 105/204 (51.47%), Query Frame = 0


Query: 5   GRRRPKASFN---PPPPPTPQFR------RDSDVSFASSRPSSIGMSRPPAASIDMYKER 64
           G+RR    F    PPPPP+ + +      RDSD SFASSRPSSIG+    A+      +R
Sbjct: 7   GKRRTTVGFGGAPPPPPPSIEQQRHLFNSRDSDASFASSRPSSIGLGGRGASD-----DR 66

Query: 65  AVQISTVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYP--PTKLEDD 124
           +  I  +N        L +H+F ++ +    PS+KD++ET+  LL  LDYP    K ++D
Sbjct: 67  SSMIRFINAF------LSTHNFPISIRGNPVPSVKDISETLKFLLSALDYPCDSIKWDED 126

Query: 125 LPILLKSLGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------N 179
           L   LKS   PFKI K+ LK P  PH    +LA++HWL +                   +
Sbjct: 127 LVFFLKSQKCPFKITKSSLKAPNTPHNWPTVLAVVHWLAELARFHQHLVSNSTSVPEDNS 186

[Close]

BLAST of PI0000374 vs. ExPASy Swiss-Prot
Match: Q76I89 (Kinetochore protein NDC80 homolog OS=Gallus gallus OX=9031 GN=NDC80 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.9e-07
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 75  HSFNVTFKPFSPPSLKD----LTETINLLLQCLDYPPTKLEDDLPILLKSLGYPFKINKN 134
           ++ NVT K    PS+KD     T     L    + P +K E+++P + K LGYPF ++K+
Sbjct: 111 YAHNVTIKSLQSPSVKDFIKIFTFIYGFLCPSYELPDSKFEEEIPRVFKELGYPFPLSKS 170

Query: 135 ILKNPPAPHQRYQILALLHWLVQNLQL 158
            +    APH   QI+A L WL    +L
Sbjct: 171 SMYTVGAPHTWPQIVAALIWLTDCFKL 197

[Close]

BLAST of PI0000374 vs. ExPASy Swiss-Prot
Match: O14777 (Kinetochore protein NDC80 homolog OS=Homo sapiens OX=9606 GN=NDC80 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.9e-07
Identity = 29/87 (33.33%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQCL----DYPPTKLEDDLPILLKSLGYPFKINKN 134
           ++ NV+ K    PS+KD  +    L   L    + P TK E+++P + K LGYPF ++K+
Sbjct: 108 YAHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKS 167

Query: 135 ILKNPPAPHQRYQILALLHWLVQNLQL 158
            +    APH    I+A L WL+  +++
Sbjct: 168 SMYTVGAPHTWPHIVAALVWLIDCIKI 194

[Close]

BLAST of PI0000374 vs. ExPASy Swiss-Prot
Match: Q4R630 (Kinetochore protein NDC80 homolog OS=Macaca fascicularis OX=9541 GN=NDC80 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.9e-07
Identity = 29/87 (33.33%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQCL----DYPPTKLEDDLPILLKSLGYPFKINKN 134
           ++ NV+ K    PS+KD  +    L   L    + P TK E+++P + K LGYPF ++K+
Sbjct: 108 YAHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKS 167

Query: 135 ILKNPPAPHQRYQILALLHWLVQNLQL 158
            +    APH    I+A L WL+  +++
Sbjct: 168 SMYTVGAPHTWPHIVAALVWLIDCIKI 194

[Close]

BLAST of PI0000374 vs. ExPASy Swiss-Prot
Match: Q5U4X5 (Kinetochore protein NDC80 homolog OS=Xenopus tropicalis OX=8364 GN=ndc80 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.0e-06
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQ--CLDY--PPTKLEDDLPILLKSLGYPFKINKN 134
           +S  +T K    PS KD  +    +    C +Y  P +K E+++P + K LGYPF ++K+
Sbjct: 107 YSQTLTVKSLQGPSTKDFLKIFAFIYTFICPNYENPESKFEEEIPRIFKELGYPFALSKS 166

Query: 135 ILKNPPAPHQRYQILALLHWLVQNLQL 158
            +    APH   QI+A L WL+  ++L
Sbjct: 167 SMYTVGAPHTWPQIVAALVWLIDCVKL 193

[Close]

BLAST of PI0000374 vs. ExPASy TrEMBL
Match: A0A1S3AYB0 (kinetochore protein NDC80 homolog OS=Cucumis melo OX=3656 GN=LOC103484089 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.6e-85
Identity = 169/205 (82.44%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPP+ASIDMYKERAVQIS
Sbjct: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLK+LFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINKNILK PPAPHQ YQILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKNILKTPPAPHQWYQILALLHWLVQVALYNYNLANDSNPVFMGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SYLHYMRGDDDSVE L  EF  ++K
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. ExPASy TrEMBL
Match: A0A5D3DHD6 (Kinetochore protein NDC80-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00670 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.6e-85
Identity = 169/205 (82.44%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPP+ASIDMYKERAVQIS
Sbjct: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLK+LFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINKNILK PPAPHQ YQILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKNILKTPPAPHQWYQILALLHWLVQVALYNYNLANDSNPVFMGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SYLHYMRGDDDSVE L  EF  ++K
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. ExPASy TrEMBL
Match: A0A0A0L740 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G213500 PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.7e-84
Identity = 168/205 (81.95%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKGT RRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRP +ASIDMYKERAVQIS
Sbjct: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLK+LFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINKNILKNPPAPHQ YQILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SYLHYMRGDDDSVE L  EF  ++K
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. ExPASy TrEMBL
Match: A0A6J1JAC2 (kinetochore protein NDC80 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482699 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKG GRR PK SFNPPPPPTPQFRRDSD SFASSRPSSIGM+RP AASIDMYKERAVQIS
Sbjct: 1   MKGNGRRHPKGSFNPPPPPTPQFRRDSDASFASSRPSSIGMARPAAASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
            VNTINSSLK+LF+HSFN+TFKPFSPPSLKDLTETI+LLLQCLDY PTKLEDDLPI+LKS
Sbjct: 61  AVNTINSSLKELFNHSFNLTFKPFSPPSLKDLTETIHLLLQCLDYHPTKLEDDLPIVLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINK ILK PPAPHQ Y ILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKGILKTPPAPHQWYPILALLHWLVQVAVYNYNLANDSDSFVSSNDVNVYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SY+ Y+RGDDDSVE L  EF  ++K
Sbjct: 181 SYVQYIRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. ExPASy TrEMBL
Match: A0A6J1E5Y9 (kinetochore protein NDC80 homolog OS=Cucurbita moschata OX=3662 GN=LOC111430885 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.8e-75
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKG GRR PK SFNPPPPPTPQFRRDSD SFASSRPSSIGM+RP AASIDMYKERAVQIS
Sbjct: 1   MKGNGRRHPKGSFNPPPPPTPQFRRDSDASFASSRPSSIGMARPAAASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
            VNTINSSLK+LF+HSFN+TFKPFSPPSLKDLTETI+LLLQCLDY PTKLEDDLPI+LKS
Sbjct: 61  AVNTINSSLKELFNHSFNLTFKPFSPPSLKDLTETIHLLLQCLDYHPTKLEDDLPIVLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINK ILK PPAPHQ Y ILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKGILKTPPAPHQWYPILALLHWLVQVAVYNYNLANDSDSFVSSNDVNVYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SY+ Y+RGDDDSVE L  EF  ++K
Sbjct: 181 SYVQYIRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. NCBI nr
Match: XP_008439248.1 (PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo] >XP_008439249.1 PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo] >KAA0033664.1 kinetochore protein NDC80-like protein [Cucumis melo var. makuwa] >TYK22962.1 kinetochore protein NDC80-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 169/205 (82.44%), Postives = 176/205 (85.85%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPP+ASIDMYKERAVQIS
Sbjct: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLK+LFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINKNILK PPAPHQ YQILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKNILKTPPAPHQWYQILALLHWLVQVALYNYNLANDSNPVFMGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SYLHYMRGDDDSVE L  EF  ++K
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. NCBI nr
Match: XP_004149971.2 (kinetochore protein NDC80 homolog isoform X1 [Cucumis sativus] >KAE8650517.1 hypothetical protein Csa_009662 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 9.8e-84
Identity = 168/205 (81.95%), Postives = 175/205 (85.37%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKGT RRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRP +ASIDMYKERAVQIS
Sbjct: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLK+LFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINKNILKNPPAPHQ YQILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SYLHYMRGDDDSVE L  EF  ++K
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. NCBI nr
Match: KAG6576966.1 (Kinetochore protein NDC80-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014987.1 Kinetochore protein NDC80-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.0 bits (746), Expect = 3.7e-75
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKG GRR PK SFNPPPPPTPQFRRDSD SFASSRPSSIGM+RP AASIDMYKERAVQIS
Sbjct: 1   MKGNGRRHPKGSFNPPPPPTPQFRRDSDASFASSRPSSIGMARPAAASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
            VNTINSSLK+LF+HSFN+TFKPFSPPSLKDLTETI+LLLQCLDY PTKLEDDLPI+LKS
Sbjct: 61  AVNTINSSLKELFNHSFNLTFKPFSPPSLKDLTETIHLLLQCLDYHPTKLEDDLPIVLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINK ILK PPAPHQ Y ILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKGILKTPPAPHQWYPILALLHWLVQVAVYNYNLANDSDSFVSSNDVNVYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SY+ Y+RGDDDSVE L  EF  ++K
Sbjct: 181 SYVQYIRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. NCBI nr
Match: XP_022984383.1 (kinetochore protein NDC80 homolog [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 3.7e-75
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKG GRR PK SFNPPPPPTPQFRRDSD SFASSRPSSIGM+RP AASIDMYKERAVQIS
Sbjct: 1   MKGNGRRHPKGSFNPPPPPTPQFRRDSDASFASSRPSSIGMARPAAASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
            VNTINSSLK+LF+HSFN+TFKPFSPPSLKDLTETI+LLLQCLDY PTKLEDDLPI+LKS
Sbjct: 61  AVNTINSSLKELFNHSFNLTFKPFSPPSLKDLTETIHLLLQCLDYHPTKLEDDLPIVLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINK ILK PPAPHQ Y ILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKGILKTPPAPHQWYPILALLHWLVQVAVYNYNLANDSDSFVSSNDVNVYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SY+ Y+RGDDDSVE L  EF  ++K
Sbjct: 181 SYVQYIRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. NCBI nr
Match: XP_023553517.1 (kinetochore protein NDC80 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.7e-75
Identity = 153/205 (74.63%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPAASIDMYKERAVQIS 60
           MKG GRR PK SFNPPPPPTPQFRRDSD SFASSRPSSIGM+RP AASIDMYKERAVQIS
Sbjct: 1   MKGNGRRHPKGSFNPPPPPTPQFRRDSDASFASSRPSSIGMARPAAASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
            VNTINSSLK+LF+HSFN+TFKPFSPPSLKDLTETI+LLLQCLDY PTKLEDDLPI+LKS
Sbjct: 61  AVNTINSSLKELFNHSFNLTFKPFSPPSLKDLTETIHLLLQCLDYHPTKLEDDLPIVLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------NLQLSFLN 180
           LGYPFKINK ILK PPAPHQ Y ILALLHWLVQ                   ++ +  LN
Sbjct: 121 LGYPFKINKGILKTPPAPHQWYPILALLHWLVQVAVYNYNLANDSDSFVSSNDVNVYVLN 180

Query: 181 SYLHYMRGDDDSVEVL--EFTIKIK 185
           SY+ Y+RGDDDSVE L  EF  ++K
Sbjct: 181 SYVQYIRGDDDSVEALDQEFMERLK 205

[Close]

BLAST of PI0000374 vs. TAIR 10
Match: AT3G54630.1 (CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 24780 Blast hits to 15608 proteins in 1321 species: Archae - 545; Bacteria - 2969; Metazoa - 12597; Fungi - 2181; Plants - 1581; Viruses - 39; Other Eukaryotes - 4868 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 5.1e-22
Identity = 72/204 (35.29%), Postives = 105/204 (51.47%), Query Frame = 0


Query: 5   GRRRPKASFN---PPPPPTPQFR------RDSDVSFASSRPSSIGMSRPPAASIDMYKER 64
           G+RR    F    PPPPP+ + +      RDSD SFASSRPSSIG+    A+      +R
Sbjct: 7   GKRRTTVGFGGAPPPPPPSIEQQRHLFNSRDSDASFASSRPSSIGLGGRGASD-----DR 66

Query: 65  AVQISTVNTINSSLKDLFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYP--PTKLEDD 124
           +  I  +N        L +H+F ++ +    PS+KD++ET+  LL  LDYP    K ++D
Sbjct: 67  SSMIRFINAF------LSTHNFPISIRGNPVPSVKDISETLKFLLSALDYPCDSIKWDED 126

Query: 125 LPILLKSLGYPFKINKNILKNPPAPHQRYQILALLHWLVQ-------------------N 179
           L   LKS   PFKI K+ LK P  PH    +LA++HWL +                   +
Sbjct: 127 LVFFLKSQKCPFKITKSSLKAPNTPHNWPTVLAVVHWLAELARFHQHLVSNSTSVPEDNS 186

The following BLAST results are available for this feature:

BLAST of PI0000374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1G5	7.2e-21	35.29	Kinetochore protein NDC80 homolog OS=Arabidopsis thaliana OX=3702 GN=NDC80 PE=1 ...	[more]
Q76I89	5.9e-07	35.63	Kinetochore protein NDC80 homolog OS=Gallus gallus OX=9031 GN=NDC80 PE=1 SV=1	[more]
O14777	5.9e-07	33.33	Kinetochore protein NDC80 homolog OS=Homo sapiens OX=9606 GN=NDC80 PE=1 SV=1	[more]
Q4R630	5.9e-07	33.33	Kinetochore protein NDC80 homolog OS=Macaca fascicularis OX=9541 GN=NDC80 PE=2 S...	[more]
Q5U4X5	5.0e-06	34.48	Kinetochore protein NDC80 homolog OS=Xenopus tropicalis OX=8364 GN=ndc80 PE=2 SV...	[more]

BLAST of PI0000374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYB0	5.6e-85	82.44	kinetochore protein NDC80 homolog OS=Cucumis melo OX=3656 GN=LOC103484089 PE=3 S...	[more]
A0A5D3DHD6	5.6e-85	82.44	Kinetochore protein NDC80-like protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0L740	4.7e-84	81.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G213500 PE=3 SV=1	[more]
A0A6J1JAC2	1.8e-75	74.63	kinetochore protein NDC80 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482699 PE...	[more]
A0A6J1E5Y9	1.8e-75	74.63	kinetochore protein NDC80 homolog OS=Cucurbita moschata OX=3662 GN=LOC111430885 ...	[more]

BLAST of PI0000374 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439248.1	1.2e-84	82.44	PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo] >XP_008439249.1 PRED...	[more]
XP_004149971.2	9.8e-84	81.95	kinetochore protein NDC80 homolog isoform X1 [Cucumis sativus] >KAE8650517.1 hyp...	[more]
KAG6576966.1	3.7e-75	74.63	Kinetochore protein NDC80-like protein, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022984383.1	3.7e-75	74.63	kinetochore protein NDC80 homolog [Cucurbita maxima]	[more]
XP_023553517.1	3.7e-75	74.63	kinetochore protein NDC80 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0000374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54630.1	5.1e-22	35.29	CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038273	Ndc80 domain superfamily	GENE3D	1.10.418.30	Ncd80 complex, Ncd80 subunit	coord: 51..158 e-value: 1.4E-17 score: 65.9
IPR005550	Kinetochore protein Ndc80	PFAM	PF03801	Ndc80_HEC	coord: 49..156 e-value: 7.4E-17 score: 61.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..41
None	No IPR available	PANTHER	PTHR46681:SF1	KINETOCHORE PROTEIN NDC80 HOMOLOG	coord: 1..181
None	No IPR available	PANTHER	PTHR46681	KINETOCHORE PROTEIN NDC80 HOMOLOG	coord: 1..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000374.1	PI0000374.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051315	attachment of mitotic spindle microtubules to kinetochore
biological_process	GO:0051301	cell division
cellular_component	GO:0031262	Ndc80 complex