PI0000319 (gene) Melon (PI 482460) v1

Overview
NamePI0000319
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionCACTA en-spm transposon protein
Locationchr10: 13564260 .. 13566537 (+)
RNA-Seq ExpressionPI0000319
SyntenyPI0000319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACAGAAAGGGAGAAACATATGGCCCATTGGTATGTACTGAACAACAGCTCTGAGATAACGTCTTATCGTAGGTATGTTTCGAATATCCCATAAGTTTAGTCAATGTCCTTCAAACGTAATTTGATATTATGTCTAACGTAACTTCTCATTCATTCTTTGTTATTACTTATAAATAGTTAACATCTGAGATTCATTCATACTCGATCAGATGGTACATTAGAATTACATCAAAGGCATCGATCACAATTTCCTGTTTGGTTTAAAGATCATGTAAGTGTAGTTCTCCAATTGAAAATTTATGCAACATTAATGAGCTATAGAATTTGAGTTGTAATAATCTATTGACATTAATAGGTTTATTCATTGCGTCAAAGAGGAGAAGCATTCGACGATCTTTATCCAATATCACTGGGTCCTTCCAATCAAGTTCGTTCTTACAATGGTTGCATTGTCAATGGTGTTCGTTTTCATAGTATTGATCGTGACAATAAAAGATGTACTCAAAACAGTGGAATCATGGTGCCTGGAGAAATTGATGGAGTAGAGTCTAATTATTTTGGTATACTAGTTGATGTTTTGGACTTAGAATATAGCCATGGAAGACGTGTGATCCTTTTCAAATGTAAGTGGTTTGACACTGACCCTAAGAAAAATAAAGTCCAACATGATTTATGGTTCATGTCCATAAATACATCTCACTATTGGTTTACAGATGATCCGTTCATCTTTGCAAATCAAGCCAAACAAGTTTTTTACATCGACGACCCTAAACTTGGCAATAATTGGAAAGTGGTGCAAATTGTCGAAAACAAACATCTTTGGGATGTTCCAGAAGCAAATGAATTGGAAGATGACGAATTAGAGTTGTTGAAAGTAGAAGGATGAATTGAAGTCGATCAATCTATCCAAGATACAATATTATGTCGAGATGATGTTGATCTTACTATTTTAGACCGTCAAGTTCATCCTCAACAATCCAATCAAAGTGTACCGTATTTAGAGGACGACAATTTCATAAATGATGAACCCGAATAAGTAGAAGCATCTACGGAGAAAAGTTTTAGTTCAAATCAATATCTAGATTTTGATGATGAAGATAGTGAATAACTGTAAAAAAAAAAACTAATTTAATCCCTACTTACAATTTTGTTTGTTATATATGTTCATAATATGTTTGATGTTATTCATGTTTTGTGTGATTGTAGGATTATGGTGGGTGCACGTCAAGATCGTCTAGCTGATGAAGTAGTTCAAGAAGCTAACACTTTGGCTACAGGTCCCTCTCTAAAGGCAACACCACCTCTGCATCAGGTGATAATAGTGTATCTTAGGTTGAACAACTAAACATTAATATAACCCCTATTTGTTATTCTTACATGCAGGATCAAGTTCTAGAACGAAAAAGAAGCATGGGCGTGGGCATAGTCGAAACATTAGTTTGGATATGTATGTACAACGACATGGAAAGATCGAAATCACAATTGATGAGAAGGTTGGAAAACCAATTAGTGTATTTGCTACAAAGTTTAGCGGCGCCATTGGGACTGCGACTCAGGACACCATTTCATTGCGTTGTTCTAAGTGGAAGGATGTACCTAGTGACGCCATTGCCAATATAAAGGCTCGTCTACAAGTAAGTACATAAAAGATGCTAATCTCATACTCATAATTACCTAAACTTTTATTGTGCTAATCTCATACTCATACTTACCTAAACTTTTATTGAATATGTAGACACATTTTATTGTGGATATGTCCTCGATGGTCGTCAACAAGTACATACATCGGCAAATTCAAACCTCGTTTAAAGAATATAGAGCAGAACTACATAAGCACTATTTTTCATTTGAGAATCCTATTATTGCTCGTGAAAGCCCACCAGATAGGTTAGATTCTTTGTGATCGTTGGGAGACCCCTGAATGGAAGGTATGTTTTATTATGTGTTTGATTTTACTAATTCACAGAAAATTTTGTGTAGGAAAAAAGACAGAAGAACAAGAAAAGTAGGGAATGTCTAAATTTCAACCATGATTGTGGATCAAAATCTTTTCTTCAAGTGCACAATGAATTGGTATGATAGGGTGCAAATTCATTATCGTTTTATTCATTCTCATTATATATAAAGACTAATCTTTTTTTATTGAATTATAGACGATTGATAAGGGTGAAGAAGTAGGCCAAGTGGAGTTGTTTTACAAAACGCACTTTTCAGAGGAGGATGGATGGGTAAGCGAGTCAGCCAAAGAAGTATATGTAAGTTATATTATATGA

mRNA sequence

ATGTTAACAGAAAGGGAGAAACATATGGCCCATTGGTATGTACTGAACAACAGCTCTGAGATAACGTCTTATCGTAGGATTATGGTGGGTGCACGTCAAGATCGTCTAGCTGATGAAGTAGTTCAAGAAGCTAACACTTTGGCTACAGGATCAAGTTCTAGAACGAAAAAGAAGCATGGGCGTGGGCATAGTCGAAACATTAGTTTGGATATGTATGTACAACGACATGGAAAGATCGAAATCACAATTGATGAGAAGGTTGGAAAACCAATTAGTGTATTTGCTACAAAGTTTAGCGGCGCCATTGGGACTGCGACTCAGGACACCATTTCATTGCGTTGTTCTAAGTGGAAGGATGTACCTAGTGACGCCATTGCCAATATAAAGGCTCGTCTACAAACGATTGATAAGGGTGAAGAAGTAGGCCAAGTGGAGTTGTTTTACAAAACGCACTTTTCAGAGGAGGATGGATGGGTAAGCGAGTCAGCCAAAGAAGTATATGTAAGTTATATTATATGA

Coding sequence (CDS)

ATGTTAACAGAAAGGGAGAAACATATGGCCCATTGGTATGTACTGAACAACAGCTCTGAGATAACGTCTTATCGTAGGATTATGGTGGGTGCACGTCAAGATCGTCTAGCTGATGAAGTAGTTCAAGAAGCTAACACTTTGGCTACAGGATCAAGTTCTAGAACGAAAAAGAAGCATGGGCGTGGGCATAGTCGAAACATTAGTTTGGATATGTATGTACAACGACATGGAAAGATCGAAATCACAATTGATGAGAAGGTTGGAAAACCAATTAGTGTATTTGCTACAAAGTTTAGCGGCGCCATTGGGACTGCGACTCAGGACACCATTTCATTGCGTTGTTCTAAGTGGAAGGATGTACCTAGTGACGCCATTGCCAATATAAAGGCTCGTCTACAAACGATTGATAAGGGTGAAGAAGTAGGCCAAGTGGAGTTGTTTTACAAAACGCACTTTTCAGAGGAGGATGGATGGGTAAGCGAGTCAGCCAAAGAAGTATATGTAAGTTATATTATATGA

Protein sequence

MLTEREKHMAHWYVLNNSSEITSYRRIMVGARQDRLADEVVQEANTLATGSSSRTKKKHGRGHSRNISLDMYVQRHGKIEITIDEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQTIDKGEEVGQVELFYKTHFSEEDGWVSESAKEVYVSYII
Homology
BLAST of PI0000319 vs. ExPASy TrEMBL
Match: A0A5D3BM75 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00400 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 98/183 (53.55%), Postives = 110/183 (60.11%), Query Frame = 0

Query: 28  MVGARQDRLADEVVQEANTLAT------GSSSRTKKKHGRGHSRNISLDMYVQRHGKIEI 87
           M+G RQD LADE+V++ANTL         SSS+TKKK    HSRNI++DMYVQRH KI I
Sbjct: 1   MMGQRQDCLADELVRKANTLTMDPSTKGDSSSKTKKKCWHWHSRNINVDMYVQRHEKILI 60

Query: 88  TIDEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQ-------- 147
           TI EKVGK + VFATKFS AIGTAT+DTIS+ CSKWKDV SD I  IKARLQ        
Sbjct: 61  TIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPYFVVCMS 120

Query: 148 --------------------------TIDKGEEVGQVELFYKTHFSEEDGW-VSESAKEV 170
                                     TIDK EEV QVE    + F E  GW V ESAKE 
Sbjct: 121 SMFINKLLNKEDWEALCDCWETPEGETIDKDEEVDQVEFLQNSLFKE--GWVVHESAKES 180

BLAST of PI0000319 vs. ExPASy TrEMBL
Match: A0A5A7SMM8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00980 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.6e-33
Identity = 97/182 (53.30%), Postives = 109/182 (59.89%), Query Frame = 0

Query: 29  VGARQDRLADEVVQEANTLAT------GSSSRTKKKHGRGHSRNISLDMYVQRHGKIEIT 88
           +G RQD LADE+V++ANTL         SSS+TKKK    HSRNI++DMYVQRH KI IT
Sbjct: 1   MGQRQDCLADELVRKANTLTMDPSTKGDSSSKTKKKCWHWHSRNINVDMYVQRHEKILIT 60

Query: 89  IDEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQ--------- 148
           I EKVGK + VFATKFS AIGTAT+DTIS+ CSKWKDV SD I  IKARLQ         
Sbjct: 61  IHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPYFVVCMSS 120

Query: 149 -------------------------TIDKGEEVGQVELFYKTHFSEEDGW-VSESAKEVY 170
                                    TIDK EEV QVE    + F E  GW V ESAKE Y
Sbjct: 121 MFINKLLNKEDWEALCDCWETPEGETIDKDEEVDQVEFLQNSLFKE--GWVVHESAKESY 180

BLAST of PI0000319 vs. ExPASy TrEMBL
Match: A0A5A7T4S0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002410 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 5.2e-29
Identity = 76/111 (68.47%), Postives = 83/111 (74.77%), Query Frame = 0

Query: 30  GARQDRLADEVVQEANTLATG------SSSRTKKKHGRGHSRNISLDMYVQRHGKIEITI 89
           G  +DRLADE+V+EAN LA G      S S TK+K G  HSRNISLDMYVQRHG+I IT 
Sbjct: 64  GRMEDRLADELVREANLLAMGFTIEGDSCSGTKRKCGHEHSRNISLDMYVQRHGRIPITN 123

Query: 90  DEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQT 135
           DE VGKPISVFATKF  AIGTATQDTI + CSKWKD  SD I+ IKA  QT
Sbjct: 124 DEMVGKPISVFATKFCNAIGTATQDTILVCCSKWKDGFSDVISTIKAHQQT 174

BLAST of PI0000319 vs. ExPASy TrEMBL
Match: A0A5D3BKN7 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00810 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 7.6e-20
Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 0

Query: 2   LTEREKHMAHWYVLNNSSEITSYRR--------IMVGARQDRLADE-----VVQEANTLA 61
           L+E EK M H     N     S  R          + A ++  A+E     V+QE N   
Sbjct: 308 LSEDEKSMCHCGCFENGLRFHSIERDNRRTTQKSGIMAYRETKAEEMNYYGVLQERNGSQ 367

Query: 62  TGSSSRTKKKHGRGHSRNISLDMYVQRHGKIEITIDEKVGKPISVFATKFSGAIGTATQD 121
            G+  R +    RG+ RNI LD +V++HGKI+I I+E+ GKP++ FA K    IGTA ++
Sbjct: 368 LGTKKRARGV--RGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTFAPKIVLGIGTAVRN 427

Query: 122 TISLRCSKWKDVPSDAIANIKARLQTIDKGEEVGQVELFYKTHFSEEDGWVSESAK 165
           TI L C  WK VP      +  RL+   KG +V ++E+F++THF +++GW+++  +
Sbjct: 428 TIPLSCENWKAVPMGVRKLVIDRLEKKKKGCDVDEIEVFHETHFRDKEGWINDGKR 481

BLAST of PI0000319 vs. ExPASy TrEMBL
Match: A0A5D3CX15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00170 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.4e-19
Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0

Query: 38  DEVVQEANTLATG------SSSRTKKKHGRGHSRNISLDMYVQRHGKIEITIDEKVGKPI 97
           DE+VQEANTL  G      SSS TKKK  RGHSRNISLDMYVQRH KI+ITIDEKVGKP+
Sbjct: 157 DELVQEANTLTMGPSIEGDSSSGTKKKRERGHSRNISLDMYVQRHEKIQITIDEKVGKPV 216

Query: 98  SVFATKFSGAIGTATQ 108
           S+FATKFS  IG A +
Sbjct: 217 SIFATKFSNTIGAALE 232

BLAST of PI0000319 vs. NCBI nr
Match: TYK00374.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-33
Identity = 98/183 (53.55%), Postives = 110/183 (60.11%), Query Frame = 0

Query: 28  MVGARQDRLADEVVQEANTLAT------GSSSRTKKKHGRGHSRNISLDMYVQRHGKIEI 87
           M+G RQD LADE+V++ANTL         SSS+TKKK    HSRNI++DMYVQRH KI I
Sbjct: 1   MMGQRQDCLADELVRKANTLTMDPSTKGDSSSKTKKKCWHWHSRNINVDMYVQRHEKILI 60

Query: 88  TIDEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQ-------- 147
           TI EKVGK + VFATKFS AIGTAT+DTIS+ CSKWKDV SD I  IKARLQ        
Sbjct: 61  TIHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPYFVVCMS 120

Query: 148 --------------------------TIDKGEEVGQVELFYKTHFSEEDGW-VSESAKEV 170
                                     TIDK EEV QVE    + F E  GW V ESAKE 
Sbjct: 121 SMFINKLLNKEDWEALCDCWETPEGETIDKDEEVDQVEFLQNSLFKE--GWVVHESAKES 180

BLAST of PI0000319 vs. NCBI nr
Match: KAA0025491.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 9.5e-33
Identity = 97/182 (53.30%), Postives = 109/182 (59.89%), Query Frame = 0

Query: 29  VGARQDRLADEVVQEANTLAT------GSSSRTKKKHGRGHSRNISLDMYVQRHGKIEIT 88
           +G RQD LADE+V++ANTL         SSS+TKKK    HSRNI++DMYVQRH KI IT
Sbjct: 1   MGQRQDCLADELVRKANTLTMDPSTKGDSSSKTKKKCWHWHSRNINVDMYVQRHEKILIT 60

Query: 89  IDEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQ--------- 148
           I EKVGK + VFATKFS AIGTAT+DTIS+ CSKWKDV SD I  IKARLQ         
Sbjct: 61  IHEKVGKLVGVFATKFSNAIGTATRDTISVHCSKWKDVSSDVIVTIKARLQPYFVVCMSS 120

Query: 149 -------------------------TIDKGEEVGQVELFYKTHFSEEDGW-VSESAKEVY 170
                                    TIDK EEV QVE    + F E  GW V ESAKE Y
Sbjct: 121 MFINKLLNKEDWEALCDCWETPEGETIDKDEEVDQVEFLQNSLFKE--GWVVHESAKESY 180

BLAST of PI0000319 vs. NCBI nr
Match: KAA0038360.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28
Identity = 76/111 (68.47%), Postives = 83/111 (74.77%), Query Frame = 0

Query: 30  GARQDRLADEVVQEANTLATG------SSSRTKKKHGRGHSRNISLDMYVQRHGKIEITI 89
           G  +DRLADE+V+EAN LA G      S S TK+K G  HSRNISLDMYVQRHG+I IT 
Sbjct: 64  GRMEDRLADELVREANLLAMGFTIEGDSCSGTKRKCGHEHSRNISLDMYVQRHGRIPITN 123

Query: 90  DEKVGKPISVFATKFSGAIGTATQDTISLRCSKWKDVPSDAIANIKARLQT 135
           DE VGKPISVFATKF  AIGTATQDTI + CSKWKD  SD I+ IKA  QT
Sbjct: 124 DEMVGKPISVFATKFCNAIGTATQDTILVCCSKWKDGFSDVISTIKAHQQT 174

BLAST of PI0000319 vs. NCBI nr
Match: TYJ99687.1 (hypothetical protein E5676_scaffold562G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-19
Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 0

Query: 2   LTEREKHMAHWYVLNNSSEITSYRR--------IMVGARQDRLADE-----VVQEANTLA 61
           L+E EK M H     N     S  R          + A ++  A+E     V+QE N   
Sbjct: 308 LSEDEKSMCHCGCFENGLRFHSIERDNRRTTQKSGIMAYRETKAEEMNYYGVLQERNGSQ 367

Query: 62  TGSSSRTKKKHGRGHSRNISLDMYVQRHGKIEITIDEKVGKPISVFATKFSGAIGTATQD 121
            G+  R +    RG+ RNI LD +V++HGKI+I I+E+ GKP++ FA K    IGTA ++
Sbjct: 368 LGTKKRARGV--RGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTFAPKIVLGIGTAVRN 427

Query: 122 TISLRCSKWKDVPSDAIANIKARLQTIDKGEEVGQVELFYKTHFSEEDGWVSESAK 165
           TI L C  WK VP      +  RL+   KG +V ++E+F++THF +++GW+++  +
Sbjct: 428 TIPLSCENWKAVPMGVRKLVIDRLEKKKKGCDVDEIEVFHETHFRDKEGWINDGKR 481

BLAST of PI0000319 vs. NCBI nr
Match: TYK14986.1 (uncharacterized protein E5676_scaffold45G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18
Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0

Query: 38  DEVVQEANTLATG------SSSRTKKKHGRGHSRNISLDMYVQRHGKIEITIDEKVGKPI 97
           DE+VQEANTL  G      SSS TKKK  RGHSRNISLDMYVQRH KI+ITIDEKVGKP+
Sbjct: 157 DELVQEANTLTMGPSIEGDSSSGTKKKRERGHSRNISLDMYVQRHEKIQITIDEKVGKPV 216

Query: 98  SVFATKFSGAIGTATQ 108
           S+FATKFS  IG A +
Sbjct: 217 SIFATKFSNTIGAALE 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BM751.2e-3353.55CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7SMM84.6e-3353.30CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7T4S05.2e-2968.47CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BKN77.6e-2035.80DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3CX156.4e-1972.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK00374.12.5e-3353.55CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0025491.19.5e-3353.30CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0038360.11.1e-2868.47CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYJ99687.11.6e-1935.80hypothetical protein E5676_scaffold562G00810 [Cucumis melo var. makuwa][more]
TYK14986.11.3e-1872.37uncharacterized protein E5676_scaffold45G00170 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000319.1PI0000319.1mRNA