PI0000288 (gene) Melon (PI 482460) v1

Overview


Name	PI0000288
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr05: 18007275 .. 18008293 (+)
RNA-Seq Expression	PI0000288
Synteny	PI0000288

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTTCATCCACGCTTCAGAACACCAACATCAAGGTGTATTCGACAGACCTGAGTCGGAGCGAGCACAACCACGCGACATGCGACGATGATGAAGCAGTTGCTCCCAGCTATACCATCCTAAAACATGGTAAGGGTAAGGTGTTGCTAGAGCTATTGCTAGAAACTAAGAACCTCAATGACGAACTAGAGGTGGAAACCGATGATAAAAACGCAGTACTTGTGTTCCTCGCAAAGAGAAAGAGAAAAGAGCTGAAGAGGAAAGAGAAAGAAAGGTGGCTGAGGAACGCCAAAGGGAAGAAAAAGAAAAGAGCAAGAAGAATTCGAGAAACGCCAGAGGGCGGGAGGTAAGCATCCTGAAGAATGCTCACCGCCTAACGATGTCGCCCTGATTCATCAGAAAATCAAGGAAAAGTTCTCAAAGGTCTCTTTTGAGAAAACAAGGAGACGGTGGTGGTGCTCAAGACCGCCATCCAAAAGAAATAGAATAACAAAATGTTGCTTGTCCAATTGGACGATTAGATTGCGAAGCTCCCAGCGAAATGCAAGGCACTGAGAGGAGAGAAAGATGACCTTAAAGCCTTGTCGAAGGACTTCGAGGAAGAGCTGGAGGCGATAAGCCCAATTGAACAAGGGTCATCGTCTAAGATGAAAAAAGGGATCGGCAGGCCATCCAAGACAAAGAAGAAAATGAGGACATCCAGACTTGAGGAGCCCCAACTCGGCGGCGGCAATGCGAAGACAAAAGAGCCCTCCATTAACATAATCATCAAGATCGAAAATGGGCTCTTTCCCTTCAACGAACCTCTCCCAGATTTCCTCTACGTGCAAATCCAATCGTTTGGATGGAAAAAGTTTTTCAAAGGGCACACAAAGTTGAGGTTAGGGGTTGTCAACAAATTTTATGACGAAAAGCCCAACGTCAAAGAACATTGCGTTCAGATAAAGGTGAGCTTCAACGCTAAGGCCATCAACGACCTCTATGACTTGTCCAATGACGTGGACACACCCGAGTAG

mRNA sequence

ATGCAAGTTCATCCACGCTTCAGAACACCAACATCAAGTACTTGTGTTCCTCGCAAAGAGAAAGAGAAAAGAGCTGAAGAGGAAAGAGAAAGAAAGGTGGCTGAGGAACGCCAAAGGGAAGAAAAAGAAAAGAGCAAGAAGAATTCGAGAAACGCCAGAGGGCGGGAGATTGCGAAGCTCCCAGCGAAATGCAAGGCACTGAGAGGAGAGAAAGATGACCTTAAAGCCTTGTCGAAGGACTTCGAGGAAGAGCTGGAGGCGATAAGCCCAATTGAACAAGGGTCATCGTCTAAGATGAAAAAAGGGATCGGCAGGCCATCCAAGACAAAGAAGAAAATGAGGACATCCAGACTTGAGGAGCCCCAACTCGGCGGCGGCAATGCGAAGACAAAAGAGCCCTCCATTAACATAATCATCAAGATCGAAAATGGGCTCTTTCCCTTCAACGAACCTCTCCCAGATTTCCTCTACGTGCAAATCCAATCGTTTGGATGGAAAAAGTTTTTCAAAGGGCACACAAAGTTGAGGTTAGGGGTTGTCAACAAATTTTATGACGAAAAGCCCAACGTCAAAGAACATTGCGTTCAGATAAAGGTGAGCTTCAACGCTAAGGCCATCAACGACCTCTATGACTTGTCCAATGACGTGGACACACCCGAGTAG

Coding sequence (CDS)

ATGCAAGTTCATCCACGCTTCAGAACACCAACATCAAGTACTTGTGTTCCTCGCAAAGAGAAAGAGAAAAGAGCTGAAGAGGAAAGAGAAAGAAAGGTGGCTGAGGAACGCCAAAGGGAAGAAAAAGAAAAGAGCAAGAAGAATTCGAGAAACGCCAGAGGGCGGGAGATTGCGAAGCTCCCAGCGAAATGCAAGGCACTGAGAGGAGAGAAAGATGACCTTAAAGCCTTGTCGAAGGACTTCGAGGAAGAGCTGGAGGCGATAAGCCCAATTGAACAAGGGTCATCGTCTAAGATGAAAAAAGGGATCGGCAGGCCATCCAAGACAAAGAAGAAAATGAGGACATCCAGACTTGAGGAGCCCCAACTCGGCGGCGGCAATGCGAAGACAAAAGAGCCCTCCATTAACATAATCATCAAGATCGAAAATGGGCTCTTTCCCTTCAACGAACCTCTCCCAGATTTCCTCTACGTGCAAATCCAATCGTTTGGATGGAAAAAGTTTTTCAAAGGGCACACAAAGTTGAGGTTAGGGGTTGTCAACAAATTTTATGACGAAAAGCCCAACGTCAAAGAACATTGCGTTCAGATAAAGGTGAGCTTCAACGCTAAGGCCATCAACGACCTCTATGACTTGTCCAATGACGTGGACACACCCGAGTAG

Protein sequence

MQVHPRFRTPTSSTCVPRKEKEKRAEEERERKVAEERQREEKEKSKKNSRNARGREIAKLPAKCKALRGEKDDLKALSKDFEEELEAISPIEQGSSSKMKKGIGRPSKTKKKMRTSRLEEPQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVVNKFYDEKPNVKEHCVQIKVSFNAKAINDLYDLSNDVDTPE

Homology

[Close]

BLAST of PI0000288 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.4e-12
Identity = 72/221 (32.58%), Postives = 122/221 (55.20%), Query Frame = 0


Query: 20  EKEKRAEEERERKVAEERQREEKEKSK------KNSRNARGREIAKLPAKCKAL------ 79
           E EKR  EER+++  +E + + KE++K      + ++  +   +A L  + +++      
Sbjct: 127 EDEKRKGEERKKQKKDEDRAQRKEEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKV 186

Query: 80  --RGEKDDLKALSKDFEEELEAISPIEQGSSSKMKKGI-----GRPSKTKKKMRTSRLEE 139
               E D +  + ++F  E+E +SP+      + +KG+      + SK+K+K  TSR ++
Sbjct: 187 AEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPE-EKGLTNIEFPKKSKSKRKAGTSRPKD 246

Query: 140 PQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVV 199
            Q G    K     ++ +IKIE GL PFN+PL +FLY  I++   +KFF   TK++L +V
Sbjct: 247 IQRGN---KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIV 306

Query: 200 NKFYDEKPNVKEHCVQI---KVSFNAKAINDLYDLSNDVDT 219
           + FY  K ++ E  + +   KVSF  + IN+LYDL ND DT
Sbjct: 307 DMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 343

[Close]

BLAST of PI0000288 vs. ExPASy TrEMBL
Match: A0A5A7VFY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00390 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-11
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 120 EPQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGV 179
           EP L   N   +  +     K++  LFP+N  LPDF++  I++F W KFF    K+RL V
Sbjct: 5   EPSLSPENQGLRTVAATKPKKVKKVLFPYNGALPDFIHRPIKAFKWSKFFSKEMKVRLDV 64

Query: 180 VNKFYDEKPNVKEHCVQI---KVSFNAKAINDLYDLSNDVDTP 220
           V KFY  + ++ +    +   K+ FNAK IN+LY+LSNDV  P
Sbjct: 65  VEKFYVPRYHLTKFYATVEREKIYFNAKVINELYNLSNDVKYP 107

[Close]

BLAST of PI0000288 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-09
Identity = 69/221 (31.22%), Postives = 115/221 (52.04%), Query Frame = 0


Query: 19  KEKEKRAEEERERKVAEERQREEKE------------KSKKNSRNARGREIAKLPAKCK- 78
           + K K  + E  + +   R+  +KE            K K+ +  +   ++  +  + K 
Sbjct: 96  RPKNKHLKHEANKVLVGHREASKKEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKV 155

Query: 79  ALRGEKDDLKALSKDFEEELEAISPIEQGSSSKMKKGI-----GRPSKTKKKMRTSRLEE 138
           A   E D +  + ++F  E+E +SP+      + +KG+      + SK+K+K  TSR ++
Sbjct: 156 AEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPE-EKGLTNIEFPKKSKSKRKAGTSRPKD 215

Query: 139 PQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVV 198
            Q G    K     ++ +IKIE GL PFN+PL +FLY  I++   +KFF   TK++L +V
Sbjct: 216 IQRGN---KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIV 275

Query: 199 NKFYDEKPNVKEHCVQI---KVSFNAKAINDLYDLSNDVDT 219
           + FY  K ++ E  + +   KVSF  + IN+LYDL ND DT
Sbjct: 276 DMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 312

[Close]

BLAST of PI0000288 vs. ExPASy TrEMBL
Match: A0A5A7VMD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00650 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.0e-09
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 105 RPSKTKKKMRTSRLEEPQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFG 164
           RP K K K+RTSR E+ Q    +    +  ++ ++KIE GLF F+  L DFLY  I++F 
Sbjct: 20  RPKKDKNKVRTSRSEDVQT---SEPLNDQKLDKLLKIEKGLFLFSGHLLDFLYEPIKAFK 79

Query: 165 WKKFFKGHTKLRLGVVNKFYDEK 188
           W+KFF+G  K+RL VVN FY  K
Sbjct: 80  WEKFFRGDAKVRLDVVNMFYTVK 99

[Close]

BLAST of PI0000288 vs. ExPASy TrEMBL
Match: A0A5A7UMK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001800 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-09
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 139 IKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVVNKFYDEKPNVKEHCVQI- 198
           +KIE GLFPF + LP FL+  I++F W+K F+G TK+RL VV+ FY  K +  +    + 
Sbjct: 1   MKIEKGLFPFKDALPYFLHRPIKAFEWRKLFEGDTKVRLYVVDMFYRTKFHPTDLYAMVD 60

Query: 199 --KVSFNAKAINDLYDLSNDVD 218
             ++SF A+ IN+LY   N+ +
Sbjct: 61  GERISFRAEVINELYGFPNEAE 82

[Close]

BLAST of PI0000288 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 9.0e-12
Identity = 72/221 (32.58%), Postives = 122/221 (55.20%), Query Frame = 0


Query: 20  EKEKRAEEERERKVAEERQREEKEKSK------KNSRNARGREIAKLPAKCKAL------ 79
           E EKR  EER+++  +E + + KE++K      + ++  +   +A L  + +++      
Sbjct: 127 EDEKRKGEERKKQKKDEDRAQRKEEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKV 186

Query: 80  --RGEKDDLKALSKDFEEELEAISPIEQGSSSKMKKGI-----GRPSKTKKKMRTSRLEE 139
               E D +  + ++F  E+E +SP+      + +KG+      + SK+K+K  TSR ++
Sbjct: 187 AEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPE-EKGLTNIEFPKKSKSKRKAGTSRPKD 246

Query: 140 PQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVV 199
            Q G    K     ++ +IKIE GL PFN+PL +FLY  I++   +KFF   TK++L +V
Sbjct: 247 IQRGN---KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIV 306

Query: 200 NKFYDEKPNVKEHCVQI---KVSFNAKAINDLYDLSNDVDT 219
           + FY  K ++ E  + +   KVSF  + IN+LYDL ND DT
Sbjct: 307 DMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 343

[Close]

BLAST of PI0000288 vs. NCBI nr
Match: KAA0066658.1 (hypothetical protein E6C27_scaffold979G00900 [Cucumis melo var. makuwa] >TYK04101.1 hypothetical protein E5676_scaffold2119G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-11
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 120 EPQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGV 179
           EP L   N   +  +     K++  LFP+N  LPDF++  I++F W KFF    K+RL V
Sbjct: 5   EPSLSPENQGLRTVAATKPKKVKKVLFPYNGALPDFIHRPIKAFKWSKFFSKEMKVRLDV 64

Query: 180 VNKFYDEKPNVKEHCVQI---KVSFNAKAINDLYDLSNDVDTP 220
           V KFY  + ++ +    +   K+ FNAK IN+LY+LSNDV  P
Sbjct: 65  VEKFYVPRYHLTKFYATVEREKIYFNAKVINELYNLSNDVKYP 107

[Close]

BLAST of PI0000288 vs. NCBI nr
Match: KAE8645907.1 (hypothetical protein Csa_023734, partial [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-10
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 139 IKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVVNKFYDEKPNVKEHCVQI- 198
           IKIE GL PF +PL DFLY  I++F WKKFF   T++RL +V+ FY  K + +E  V + 
Sbjct: 5   IKIEKGLLPFKDPLLDFLYDPIKAFKWKKFFVSETQIRLDLVDMFYAAKFHPQESYVVVK 64

Query: 199 --KVSFNAKAINDLYDLSND 216
             KV F  ++IN+LYD  ND
Sbjct: 65  GEKVPFIVESINELYDFPND 84

[Close]

BLAST of PI0000288 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 2.5e-09
Identity = 69/221 (31.22%), Postives = 115/221 (52.04%), Query Frame = 0


Query: 19  KEKEKRAEEERERKVAEERQREEKE------------KSKKNSRNARGREIAKLPAKCK- 78
           + K K  + E  + +   R+  +KE            K K+ +  +   ++  +  + K 
Sbjct: 96  RPKNKHLKHEANKVLVGHREASKKEAKTKLAEIQTTKKKKQETLASLSEQVESVVTRSKV 155

Query: 79  ALRGEKDDLKALSKDFEEELEAISPIEQGSSSKMKKGI-----GRPSKTKKKMRTSRLEE 138
           A   E D +  + ++F  E+E +SP+      + +KG+      + SK+K+K  TSR ++
Sbjct: 156 AEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPE-EKGLTNIEFPKKSKSKRKAGTSRPKD 215

Query: 139 PQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFGWKKFFKGHTKLRLGVV 198
            Q G    K     ++ +IKIE GL PFN+PL +FLY  I++   +KFF   TK++L +V
Sbjct: 216 IQRGN---KMSAQKLDKLIKIEKGLLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIV 275

Query: 199 NKFYDEKPNVKEHCVQI---KVSFNAKAINDLYDLSNDVDT 219
           + FY  K ++ E  + +   KVSF  + IN+LYDL ND DT
Sbjct: 276 DMFYVAKFHLNESYMIVEGEKVSFTVEEINELYDLPNDRDT 312

[Close]

BLAST of PI0000288 vs. NCBI nr
Match: KAA0066935.1 (hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-09
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 105 RPSKTKKKMRTSRLEEPQLGGGNAKTKEPSINIIIKIENGLFPFNEPLPDFLYVQIQSFG 164
           RP K K K+RTSR E+ Q    +    +  ++ ++KIE GLF F+  L DFLY  I++F 
Sbjct: 20  RPKKDKNKVRTSRSEDVQT---SEPLNDQKLDKLLKIEKGLFLFSGHLLDFLYEPIKAFK 79

Query: 165 WKKFFKGHTKLRLGVVNKFYDEK 188
           W+KFF+G  K+RL VVN FY  K
Sbjct: 80  WEKFFRGDAKVRLDVVNMFYTVK 99

The following BLAST results are available for this feature:

BLAST of PI0000288 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000288 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TBU7	4.4e-12	32.58	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7VFY5	2.2e-11	40.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DQE7	1.2e-09	31.22	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7VMD3	2.0e-09	46.99	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UMK2	4.5e-09	42.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0000288 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038829.1	9.0e-12	32.58	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0066658.1	4.5e-11	40.78	hypothetical protein E6C27_scaffold979G00900 [Cucumis melo var. makuwa] >TYK0410...	[more]
KAE8645907.1	1.0e-10	50.00	hypothetical protein Csa_023734, partial [Cucumis sativus]	[more]
TYK25768.1	2.5e-09	31.22	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0066935.1	4.2e-09	46.99	hypothetical protein E6C27_scaffold550G00650 [Cucumis melo var. makuwa]	[more]

BLAST of PI0000288 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	COILS	Coil	Coil	coord: 18..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000288.1	PI0000288.1	mRNA