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PI0000274 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCTTTACCTCATGCGAGCAGTGGGTAGTGGGTAAGGCCCTTCTCCAAACCCCTTCCTACCTTCCTACGAGACTCACCCAACCCACCCTAAACGCATAAGAACAAAGAACACGTCCTCGCCTTTCCTCCGTCCGACCACCGGCTGCCTCTGCTCACGCCTGCATCTCACTTTTCCCAGTCGTTGCCGGTAACGCTCTCCATTCCACATTCTTTCTTTCTCTCTCTCTCTCTCTCTCTGTTTCTCAATCTCATCCTGTTCGCAGCACCGTTTAGCAGCCCGCCCTGCCACAACGAAAATCCTCCGCCTCCTATCGTCCATCTTTGCCACGCTACTGCCGGAGCTCCAACTGATTTCAAATTTTTATTTGATATTGCTTAGGTATCAAAACAAATCACAGTTGATTTTTAGGTAATTTTTTCTCCTTTGCATTCAAACACACTGATGATTTGGAATCCTAAAGAAATCAGGGGTTAGCCAAAAGCTTTATTTGATATTGCTGAGCCGCTGACAAATTCAATTTACTTTTTCGTTCTTATCTCTAAGGAACATGGAAAAAGTTGCAATTGATTCTGCCTCTGATGGCGAGGAAGAATATGTATTGCTCGACCTTGGTGATGTATCGCTGCTTGACATTCCACCCAATGCTCCGTATGTTCTATCTGTATGTTTCTGACCTACTCTAATTATCAAGTAATTTAATTTTTTCCACGAGCTAATTCTTGATCTTTAATTACTTGCTTTCAAGTTACCGTTGTTAAATTAAAATGAGTTGTTTATTAATTTCCCCTTTGAGCAGTTAAGAATAACATATTTGAATATTTAAGAATTTAGACTTTAACAAGCATCAGGGGTTGTTAAATTTTTTATTATTTTTAATGAAAATGACAATTGCATCTAAAGTTTGAAAATAATCTCATATGTAGATGATATGTTAATCATAAATGATGTCAAATCTATGTTGAGTATAAATTTTGACGTGAGACTTAGTAGAAGCTAATGTAATCTTAGGATTGTAAACCATCATGTACTCCTTCTAATCCAAAGTTGTTCAAGAACACTAGTGACAATGCTAACCAATCTCCATATGCGAGCATTATTGGCAATCTCAGATATGCTTCTGACTGCAATAGGTCAGATATAGTGTAGAATTAGTATGTAGGTTTACAAGCAAACCTAATATAGAGCATTGGAATGCCATAGAAAGTCTTATGAGATACTCGAAGAAAACCCCATGATATGCTGAAGTGAAAAAGGTTGAATTTGTTATTTTGATGAGGTGTTTAACTTCTTTACGAGGTGTTTAACTTGTTATTTTGATGCCCAAACATTCACACCCAAACCTTCATGCATAAATTCATGAATTCTATGGTGTTTAATTTGTTGTTTTGATATTTTTAAATGGAATATTTCACAATACGTTCATATACACGACATATATTTAATTTTTAATAAAAAAATAATGTCTTCCCAATGTGCTGTGTCCTACCTTTTCAAAAATTGGTGTGTTGCCGTGTCGGTGTCCATGTTTCCTAGCATATGGGCACTCATAACTTGGTTTGATTTGAGAGAAGAGCAAATTACATTACTTGTGATGACAACTATTCAAAATAAGGTTATACTTTAACCCCGTATACCTATATAAAGAGAGAAGTAGTTAACTAGTAAGTTACTTTAGTACAATTTTTTTCCTACCAGGAGGCTTCCAAGTTTTCGTGCTAGACTGTTACACAACTCGCATATTCCTAGAGTATCGCTTGAGGGTTTGGTTGGTTTATGATTATTACGTGCAGCGAGCTTTAAGAAAAAAAAACATATTGTGTAATTGGGGAAGCATTCTGTTAATTTGCACGCTTTATGTGAATTTTGATTCATTTGTTTTCCAGGGTTTGGACACCATGAATCCAGTGTTGACTATCTGCGACAAATTTAAGATGGTAAGTTGTTAATAAGATACAAGCTTTCACCTAGTGTACTTCAGCAGAACCATAATGTGTAGTCTCTTGGCATTATTGTGTTTACTATTGTTGTTAAGAGTACCTAAATTTTTACCATTTAAGGATAAGCTTCAGATGTATTGAAATTTATGCTAATACACAATTTAAATGATATTGATCTTACTCTCTTATCTTTTGGTTTGGTGCAAGGCTGTTGTAGTCTATATTTTGTGATTAACAGGCATTTCTATCAAACTTTCATATAAAAATATTTGTTTTAAATCTCTTTTGTAGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACCTTTGCGGAAGGTGAGCAAATTTAAAGAAAACGTAGCCGTTTGATTTTAAAGCAAGTTTTCAATTTGTTCTTTAAAACTTTGCATAGATATTGAAAAACCAATGTCTTACACTGAAGTTATATTCTCTAATGTAGAGGAAGTCCCTGTGGTTGAAGAAGAAGCTCAGCCATCTGAAACAAATCGTTGCTCGAGAGAAGCAGTTGAACCAAAACAAGCTACCAGAAAGGAGTTGAAGCCCGTTGCCTCTGTACATAAGATCCTTAAATTTAAGTTACTTGATTCTGCTGCTATTCCAAGCTCAATATCTTAGTGCACTAAAGAGACTAATGTTATTTCATGTGTATATATTGAGCTGTAAGTTGTATGTATAGTTAGATGCAAATGGGACATAACCTAAGAATTTAGATGAGTTGTCAGTACTCATCCAAGTAAAGAAGTAGAGAGGGAAAGAGGTATCGTCGTTCAACGCATGAAGTTTGTAAATCAAAACACCTCACTATCTTCTATAAAATAGACCGGAGGAGTTATCATGGAAGAGTATTTTCTTACCAAATATTT TTTTTCTTTACCTCATGCGAGCAGTGGGTAGTGGGTAAGGCCCTTCTCCAAACCCCTTCCTACCTTCCTACGAGACTCACCCAACCCACCCTAAACGCATAAGAACAAAGAACACGTCCTCGCCTTTCCTCCGTCCGACCACCGGCTGCCTCTGCTCACGCCTGCATCTCACTTTTCCCAGTCGTTGCCGCACCGTTTAGCAGCCCGCCCTGCCACAACGAAAATCCTCCGCCTCCTATCGTCCATCTTTGCCACGCTACTGCCGGAGCTCCAACTGATTTCAAATTTTTATTTGATATTGCTTAGGTATCAAAACAAATCACAGTTGATTTTTAGGAACATGGAAAAAGTTGCAATTGATTCTGCCTCTGATGGCGAGGAAGAATATGTATTGCTCGACCTTGGTGATGTATCGCTGCTTGACATTCCACCCAATGCTCCGTATGTTCTATCTGGTTTGGACACCATGAATCCAGTGTTGACTATCTGCGACAAATTTAAGATGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACCTTTGCGGAAGAGGAAGTCCCTGTGGTTGAAGAAGAAGCTCAGCCATCTGAAACAAATCGTTGCTCGAGAGAAGCAGTTGAACCAAAACAAGCTACCAGAAAGGAGTTGAAGCCCGTTGCCTCTGTACATAAGATCCTTAAATTTAAGTTACTTGATTCTGCTGCTATTCCAAGCTCAATATCTTAGTGCACTAAAGAGACTAATGTTATTTCATGTGTATATATTGAGCTGTAAGTTGTATGTATAGTTAGATGCAAATGGGACATAACCTAAGAATTTAGATGAGTTGTCAGTACTCATCCAAGTAAAGAAGTAGAGAGGGAAAGAGGTATCGTCGTTCAACGCATGAAGTTTGTAAATCAAAACACCTCACTATCTTCTATAAAATAGACCGGAGGAGTTATCATGGAAGAGTATTTTCTTACCAAATATTT ATGGAAAAAGTTGCAATTGATTCTGCCTCTGATGGCGAGGAAGAATATGTATTGCTCGACCTTGGTGATGTATCGCTGCTTGACATTCCACCCAATGCTCCGTATGTTCTATCTGGTTTGGACACCATGAATCCAGTGTTGACTATCTGCGACAAATTTAAGATGATTGGAGAATATGAAGAAACCATAGGCACATGTCTTACCTTTGCGGAAGAGGAAGTCCCTGTGGTTGAAGAAGAAGCTCAGCCATCTGAAACAAATCGTTGCTCGAGAGAAGCAGTTGAACCAAAACAAGCTACCAGAAAGGAGTTGAAGCCCGTTGCCTCTGTACATAAGATCCTTAAATTTAAGTTACTTGATTCTGCTGCTATTCCAAGCTCAATATCTTAG MEKVAIDSASDGEEEYVLLDLGDVSLLDIPPNAPYVLSGLDTMNPVLTICDKFKMIGEYEETIGTCLTFAEEEVPVVEEEAQPSETNRCSREAVEPKQATRKELKPVASVHKILKFKLLDSAAIPSSIS Homology
BLAST of PI0000274 vs. ExPASy TrEMBL
Match: A0A1S4DTV8 (general transcription factor 3C polypeptide 6-like OS=Cucumis melo OX=3656 GN=LOC103485483 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53 Identity = 116/129 (89.92%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of PI0000274 vs. ExPASy TrEMBL
Match: A0A0A0LML8 (TFIIIC_sub6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G406680 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53 Identity = 117/129 (90.70%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of PI0000274 vs. ExPASy TrEMBL
Match: A0A6J1JTZ1 (uncharacterized protein LOC111489725 OS=Cucurbita maxima OX=3661 GN=LOC111489725 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.7e-51 Identity = 111/131 (84.73%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of PI0000274 vs. ExPASy TrEMBL
Match: A0A6J1FF13 (uncharacterized protein LOC111445121 OS=Cucurbita moschata OX=3662 GN=LOC111445121 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.8e-51 Identity = 111/134 (82.84%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of PI0000274 vs. ExPASy TrEMBL
Match: A0A5A7USU8 (General transcription factor 3C polypeptide 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00140 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 116/145 (80.00%), Postives = 118/145 (81.38%), Query Frame = 0
BLAST of PI0000274 vs. NCBI nr
Match: XP_004138617.3 (general transcription factor 3C polypeptide 6 [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 9.5e-54 Identity = 118/129 (91.47%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of PI0000274 vs. NCBI nr
Match: XP_016899393.1 (PREDICTED: general transcription factor 3C polypeptide 6-like [Cucumis melo]) HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53 Identity = 116/129 (89.92%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of PI0000274 vs. NCBI nr
Match: XP_038885696.1 (uncharacterized protein LOC120075999 [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 4.7e-53 Identity = 115/129 (89.15%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of PI0000274 vs. NCBI nr
Match: XP_023550663.1 (uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550664.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550665.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550666.1 uncharacterized protein LOC111808744 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51 Identity = 113/134 (84.33%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of PI0000274 vs. NCBI nr
Match: XP_022993830.1 (uncharacterized protein LOC111489725 [Cucurbita maxima] >XP_022993831.1 uncharacterized protein LOC111489725 [Cucurbita maxima] >XP_022993832.1 uncharacterized protein LOC111489725 [Cucurbita maxima] >XP_022993833.1 uncharacterized protein LOC111489725 [Cucurbita maxima]) HSP 1 Score: 210.7 bits (535), Expect = 7.6e-51 Identity = 111/131 (84.73%), Postives = 119/131 (90.84%), Query Frame = 0
BLAST of PI0000274 vs. TAIR 10
Match: AT3G15420.1 (Transcription factor TFIIIC, tau55-related protein ) HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20 Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of PI0000274 vs. TAIR 10
Match: AT1G80745.1 (Transcription factor TFIIIC, tau55-related protein ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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