PI0000239 (gene) Melon (PI 482460) v1

Overview


Name	PI0000239
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Alba domain-containing protein
Location	chr06: 3618499 .. 3619309 (-)
RNA-Seq Expression	PI0000239
Synteny	PI0000239

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGTTTCAGAAGCCACCCTTGAGGTCAAGAATGAAATCCGCAATGAGGAAGAAAAGCTCCTCGTTGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCTTTCTTTTACTACTACAATCTTTCTAAGGTATTCTTATTCCTGAAGCTCTTCTGTTCAATCAACTTCTTCGTTAAGGTTTCAAAATCATGATTGCTTTGATGTTTTCATTTGTTGCAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGGTATGAGTTCTTGAATCCATTTTTTTTCATAATTGGTTTATAGTTAGATGTTCATAACTGGGATGAGCTTCATTCATTCGTTCATTGTACAGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAGTAAGAAATTTTTTCGAACCCATTGGCCATTTTAATTTGTTATTTTGGGAATAAGGCACTCTCTAAACATGATCTATTATTTGGAAATTTCTGCAGAGTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGGTTACTGCTTACTAATGGAAATTATGTCTGATTTATTGTGCAATTTTTGGATGTTTCGTTGGCTTAATGATGTATTCTTTTATCTGTTTTCCTAGATTGAGATTGCATTGGTAAATGCAGAAAAGACCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA

mRNA sequence

ATGGTCGTTTCAGAAGCCACCCTTGAGGTCAAGAATGAAATCCGCAATGAGGAAGAAAAGCTCCTCGTTGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCTTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGACCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA

Coding sequence (CDS)

ATGGTCGTTTCAGAAGCCACCCTTGAGGTCAAGAATGAAATCCGCAATGAGGAAGAAAAGCTCCTCGTTGCTGCCCCTGATAGTGAGGTTAAGGAGATTGCTGTTTTGACCGAGTTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCTTTCTTTTACTACTACAATCTTTCTAAGAGGCACATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAGGAATGGGTTGGCATTTCAAAAGAAGTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAATGGCAAGCTGGTTATGAAACCTAAGATTGAGATTGCATTGGTAAATGCAGAAAAGACCAAGAACATTTCGACTGCTCCAACAAGTGAAGATTCTTGA

Protein sequence

MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSEDS

Homology

[Close]

BLAST of PI0000239 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-24
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 41  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 100
           +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 101 KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSE 144
           K+  S+V +K+   G+ V K KIEI LV +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of PI0000239 vs. ExPASy TrEMBL
Match: A0A0A0L8F8 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.9e-65
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSEA  EVKNEIRNEEE+LLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKL ISSVSLKNGENGKLVMK
Sbjct: 65  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIALVNAEK KNISTAPTSEDS
Sbjct: 125 PKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of PI0000239 vs. ExPASy TrEMBL
Match: A0A5D3CZ81 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001140 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.5e-65
Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 2   VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL 61
           VVSEAT EVKNEI+NEEEKLLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL
Sbjct: 6   VVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL 65

Query: 62  SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKP 121
           SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK LTISSVSLKNGENGKLVMKP
Sbjct: 66  SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKP 125

Query: 122 KIEIALVNAEKTKNISTAPTSEDS 146
           KIEIALVNAEK KNISTAPTSEDS
Sbjct: 126 KIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of PI0000239 vs. ExPASy TrEMBL
Match: A0A1S3AXD3 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.5e-65
Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 2   VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL 61
           VVSEAT EVKNEI+NEEEKLLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL
Sbjct: 6   VVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL 65

Query: 62  SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKP 121
           SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK LTISSVSLKNGENGKLVMKP
Sbjct: 66  SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKP 125

Query: 122 KIEIALVNAEKTKNISTAPTSEDS 146
           KIEIALVNAEK KNISTAPTSEDS
Sbjct: 126 KIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of PI0000239 vs. ExPASy TrEMBL
Match: A0A6J1IXN8 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111480105 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 132/145 (91.03%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSEAT EVKNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +LVMK
Sbjct: 65  LSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIAL+NAEK K ISTA TSEDS
Sbjct: 125 PKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of PI0000239 vs. ExPASy TrEMBL
Match: A0A6J1EFH1 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111432040 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59
Identity = 130/145 (89.66%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSEA  E+KNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +LVMK
Sbjct: 65  LSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIAL+NAEK K ISTA TSEDS
Sbjct: 125 PKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of PI0000239 vs. NCBI nr
Match: XP_004134424.1 (uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical protein Csa_011451 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 6.1e-65
Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSEA  EVKNEIRNEEE+LLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKL ISSVSLKNGENGKLVMK
Sbjct: 65  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGKLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIALVNAEK KNISTAPTSEDS
Sbjct: 125 PKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of PI0000239 vs. NCBI nr
Match: XP_008438573.1 (PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK17261.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 2   VVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL 61
           VVSEAT EVKNEI+NEEEKLLV APDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL
Sbjct: 6   VVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNL 65

Query: 62  SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKP 121
           SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK LTISSVSLKNGENGKLVMKP
Sbjct: 66  SKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGKLVMKP 125

Query: 122 KIEIALVNAEKTKNISTAPTSEDS 146
           KIEIALVNAEK KNISTAPTSEDS
Sbjct: 126 KIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of PI0000239 vs. NCBI nr
Match: XP_038877187.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 135/145 (93.10%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSE T EVKNEIR+EEEKLLV A D EVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEGTPEVKNEIRSEEEKLLVVANDGEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK LTISSVSLK GEN KLVMK
Sbjct: 65  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKTLTISSVSLKKGENDKLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIALVNAEK KNISTAPTSEDS
Sbjct: 125 PKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of PI0000239 vs. NCBI nr
Match: XP_022980835.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 241.5 bits (615), Expect = 4.5e-60
Identity = 132/145 (91.03%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSEAT EVKNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +LVMK
Sbjct: 65  LSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIAL+NAEK K ISTA TSEDS
Sbjct: 125 PKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of PI0000239 vs. NCBI nr
Match: XP_022924600.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 2.9e-59
Identity = 130/145 (89.66%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MVVSEATLEVKNEIRNEEEKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYN 60
           MVVSEA  E+KNEIRNEEEKLLV APD EVKEIAVLTE KKKRNQIQVSNVKKPFFYYYN
Sbjct: 5   MVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFFYYYN 64

Query: 61  LSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMK 120
           LSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLKNGEN +LVMK
Sbjct: 65  LSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDRLVMK 124

Query: 121 PKIEIALVNAEKTKNISTAPTSEDS 146
           PKIEIAL+NAEK K ISTA TSEDS
Sbjct: 125 PKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of PI0000239 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 64/114 (56.14%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 19  EKLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALG 78
           E+ +V AP +      V T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALG
Sbjct: 16  ERNIVLAPATTTTTATVETH---KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALG 75

Query: 79  MAIPTVVTIAEILKRNGLAFQKKLTISSVSLKNGENGKLVMKPKIEIALVNAEK 133
           MAI TVVTI+EILK NGLA +KK+  S+V +K+   GK+V K KIEI L  ++K
Sbjct: 76  MAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDK 126

[Close]

BLAST of PI0000239 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 41  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 100
           +K+N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ EILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEK 77

Query: 101 KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSE 144
           K+  S+V +K+   G+ V K KIEI LV +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEE 120

[Close]

BLAST of PI0000239 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 111.3 bits (277), Expect = 6.5e-25
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 41  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQK 100
           +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEK 77

Query: 101 KLTISSVSLKNGENGKLVMKPKIEIALVNAEKTKNISTAPTSE 144
           K+  S+V +K+   G+ V K KIEI L  +EK   +  A   E
Sbjct: 78  KIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEE 120

The following BLAST results are available for this feature:

BLAST of PI0000239 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	2.4e-24	56.31	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of PI0000239 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8F8	2.9e-65	96.55	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 S...	[more]
A0A5D3CZ81	8.5e-65	96.53	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AXD3	8.5e-65	96.53	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 P...	[more]
A0A6J1IXN8	2.2e-60	91.03	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114801...	[more]
A0A6J1EFH1	1.4e-59	89.66	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of PI0000239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134424.1	6.1e-65	96.55	uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical pro...	[more]
XP_008438573.1	1.8e-64	96.53	PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 a...	[more]
XP_038877187.1	2.4e-61	93.10	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]
XP_022980835.1	4.5e-60	91.03	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
XP_022924600.1	2.9e-59	89.66	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 unch...	[more]

BLAST of PI0000239 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	1.0e-25	56.14	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	1.7e-25	56.31	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	6.5e-25	55.34	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 42..145 e-value: 1.8E-36 score: 126.6
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 44..133
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 44..97 e-value: 4.9E-11 score: 42.3
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 9..142
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 9..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000239.1	PI0000239.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding