PI0000202 (gene) Melon (PI 482460) v1

Overview
NamePI0000202
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr02: 16172024 .. 16173614 (+)
RNA-Seq ExpressionPI0000202
SyntenyPI0000202
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTAGTTCAGTTTAGGTGGTCAGAGGAGTGTTGTAGTGTATTACAAGCTCCTATTAGGCGTGATGAGATTAGGAGGGTGGTTTTTGATATGGATAGTAGTAAGGCTCCTGGGCCTGATGGTTTTTCAGCTGGGTTCTTCAAAGGTGCTTGGAATATGGTTGGTGAGGATTTTTGTGATGCTGTGTTGCATTTCTTTGATACATGTTATCTGCCTCTTAGGGTAAATGCTACTACGATCACCCTCATTCTCAAACGTTGTGGGGGCTAAGCCTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTCTATAAGTGCATTTCTAAGATTTTGGCGAATAGACTTCGTGTGTGGCTTCCGTCTTTTATCAGTGGTAATCAGTCCGCCTATGTTGTGGGGAGGAGTATTGTTGATAACATTATGCTTTATCAGGAGTCGGTGGGGGAACATGGTTCTTCTGGGCCTCCTAGGTGTGCAATGAAGGTAGATCTTCAGAAGGCTTACGATTCGGTGAATTGGGATTTTCTGTTCAGCTTGTTGCTTGCTATAGGCGCTCCCTTGCATTTTTTTAGTTGGATTAGGGCGTGTGTTACGTCCCCTATGTTCTCTATCATGGTTAATGGTTCTGTCGAAAGGTTCTTTCTTGGTACAAAAGGGTTGCGGCAAGGTGACCCTTTATCCCCTTTTTTGTTTGTGATGGTTGTGGAGGTGCTCACTTGTCTTTTGAATAGGCCCTCTCTGGATTTCAGGTATCATCATCGTTGAGAAAGTTTGTTTGACCCATCTAACCTTCGCTGATTATCTTATGATTTTTTGTTATGCTGATACCGCTTCTATTAGCTTTGTGCGCAAGACTCTCCGTCATTTTGGGGAGATATCGGGGTTGATTGCTAATCTGGGGAAGAGCTCTATGTTTGTGGGGGGGGGGGGTTGACAATGAGACTGCTACTGTGTTGGCGGATAGTATGGGGTTTGCTCTAGGTACTCTGCATGTTCGTTACTTGGGTATTCCCTTACTCTCTGGTCGACTGCGTTCTTCGGATTGTGCTCCTCTCATCTAGCGTATTACTAGTCGGATTTGGTCCTGGTCGGCTAGAGTTTTGTCCTTCGTTGGTACAATTCAGCTTGTGCGTTCGGTGTTTCGAAGTTTTCAGATCTTTTGGGCCAGTGTGATTGTTTTGCCGGCTGGGGTGCATCATGAGGTTGATAGACTTTTGATGTCGTATCTGTGAAGGGGTAAGGAGGATGGGAGAGGAGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGGTCGTTTGAGGAAGGGGGTCTTAATATTCAGGAGGGTAAGTCGTGGAACAACGCGTGTATCTTGAAGGTTCTTTGGTTGATATATGTTGACTAGTTTAGGGTCTCTATGGGTTGCTTGGGTGGAGTCCTATATTCTGAAGGGGCGGTCGTTGTGGTCTGTGGATAATGGAGTTTGTCGGTCCTGGAGTCTTCGTGCTATTTTGCGGCATCGTGATATCTTTAGAAAGCATGTCCATATGGAGGTTGGTGATGGGAGGCAGTGTCGGGTGTGGCTTGACCCTTGGCTGCACTGA

mRNA sequence

ATGGAGAAGGTAGTTCAGTTTAGGTGGTCAGAGGAGTGTTGTAGTGTATTACAAGCTCCTATTAGGCGTGATGAGATTAGGAGGGTGGTTTTTGATATGGATAGTAGTAAGGCTCCTGGGCCTGATGGTTTTTCAGCTGGGTTCTTCAAAGGTGCTTGGAATATGGTTGGTGAGGATTTTTGTGATGCTGTGTTGCATTTCTTTGATACATGTTATCTGCCTCTTAGGGAGTCGGTGGGGGAACATGGTTCTTCTGGGCCTCCTAGGTGTGCAATGAAGGTAGATCTTCAGAAGGCTTACGATTCGCGTATTACTAGTCGGATTTGGTCCTGGTCGGCTAGAGTTTTGTCCTTCGTTGGTACAATTCAGCTTGTGCGTTCGGTGTTTCGAAGTTTTCAGATCTTTTGGGCCAGTGTGATTGTTTTGCCGGCTGGGGTGCATCATGAGGTTGATAGACTTTTGATGTCGGGTAAGGAGGATGGGAGAGGAGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGGTCGTTTGAGGAAGGGGGTCTTAATATTCAGGAGGGGTCTCTATGGGTTGCTTGGGTGGAGTCCTATATTCTGAAGGGGCGGTCGTTGTGGTCTGTGGATAATGGAGTTTGTCGGTCCTGGAGTCTTCGTGCTATTTTGCGGCATCGTGATATCTTTAGAAAGCATGTCCATATGGAGGTTGGTGATGGGAGGCAGTGTCGGGTGTGGCTTGACCCTTGGCTGCACTGA

Coding sequence (CDS)

ATGGAGAAGGTAGTTCAGTTTAGGTGGTCAGAGGAGTGTTGTAGTGTATTACAAGCTCCTATTAGGCGTGATGAGATTAGGAGGGTGGTTTTTGATATGGATAGTAGTAAGGCTCCTGGGCCTGATGGTTTTTCAGCTGGGTTCTTCAAAGGTGCTTGGAATATGGTTGGTGAGGATTTTTGTGATGCTGTGTTGCATTTCTTTGATACATGTTATCTGCCTCTTAGGGAGTCGGTGGGGGAACATGGTTCTTCTGGGCCTCCTAGGTGTGCAATGAAGGTAGATCTTCAGAAGGCTTACGATTCGCGTATTACTAGTCGGATTTGGTCCTGGTCGGCTAGAGTTTTGTCCTTCGTTGGTACAATTCAGCTTGTGCGTTCGGTGTTTCGAAGTTTTCAGATCTTTTGGGCCAGTGTGATTGTTTTGCCGGCTGGGGTGCATCATGAGGTTGATAGACTTTTGATGTCGGGTAAGGAGGATGGGAGAGGAGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGGTCGTTTGAGGAAGGGGGTCTTAATATTCAGGAGGGGTCTCTATGGGTTGCTTGGGTGGAGTCCTATATTCTGAAGGGGCGGTCGTTGTGGTCTGTGGATAATGGAGTTTGTCGGTCCTGGAGTCTTCGTGCTATTTTGCGGCATCGTGATATCTTTAGAAAGCATGTCCATATGGAGGTTGGTGATGGGAGGCAGTGTCGGGTGTGGCTTGACCCTTGGCTGCACTGA

Protein sequence

MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDFCDAVLHFFDTCYLPLRESVGEHGSSGPPRCAMKVDLQKAYDSRITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRLLMSGKEDGRGGAKVAWVDVCRSFEEGGLNIQEGSLWVAWVESYILKGRSLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQCRVWLDPWLH
Homology
BLAST of PI0000202 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.6e-10
Identity = 45/173 (26.01%), Postives = 71/173 (41.04%), Query Frame = 0

Query: 103 RITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRL----LMSGK 162
           R++SR+  W  + LSF G + L ++V  S  +   S I+LP  + + +D+L    L    
Sbjct: 19  RVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGST 78

Query: 163 EDGRGGAKVAWVDVCRSFEEGGLNI--------------------QEGSLWVAWVESYIL 222
            + +    V W  VC   +EGGL +                    ++ SLW   ++    
Sbjct: 79  AEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYH 138

Query: 223 KGR---SLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQCRVWLDPWL 249
            G    S W +  G   S      +  RD+    V    GDG+Q R W D W+
Sbjct: 139 VGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWV 191

BLAST of PI0000202 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.4e-70
Identity = 142/249 (57.03%), Postives = 175/249 (70.28%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+R V+F MDS KAPGPDGFS GFFKGAW+++GE+F
Sbjct: 331 IDDIVQFQWSEECCQALQVPISREEVRSVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEEF 390

Query: 61  CDAVLHFFDTCYLPLRESVGEHGSSGPPRCAMKVDLQKAYDSRITSRIWSWSARVLSFVG 120
           CDAVLHFF+T YL +   V     +  P+      L+      ITSRI SWSARVLSF G
Sbjct: 391 CDAVLHFFETYYLLV--GVNATAITLIPKHNGAERLE-----HITSRIRSWSARVLSFAG 450

Query: 121 TIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRLLMSGKEDGRGGAKVAWVDVCRSFEEGG 180
            +QLVRSV RS Q++WASV VLPA VH+E   L   G  DG      AW ++  + +   
Sbjct: 451 RLQLVRSVLRSLQVYWASVFVLPAYVHNEEGGL---GIRDG-----TAW-NIASTLKILW 510

Query: 181 LNIQE-GSLWVAWVESYILKGRSLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQ 240
           L +   GSLWVAWVE+YILKGRSLW VD+ V RSW LRAILR R+  ++HV M+VG+G +
Sbjct: 511 LMLTNLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILRKREKLKQHVRMKVGNGNR 563

Query: 241 CRVWLDPWL 249
           CRVWLDPWL
Sbjct: 571 CRVWLDPWL 563

BLAST of PI0000202 vs. ExPASy TrEMBL
Match: A0A5A7UV01 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.7e-68
Identity = 175/498 (35.14%), Postives = 206/498 (41.37%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+RRV+F MDS KAPGPDGF  GFFKGAW++VGEDF
Sbjct: 102 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDF 161

Query: 61  CDAVLHFFDTCYLPL--------------------------------------------- 120
           CDAVLHFF+TCYLP+                                             
Sbjct: 162 CDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRV 221

Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
                                     +E V G H +SG PRC +KVD QKAYDS      
Sbjct: 222 WLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFL 281

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 282 FGLLIAIGTPLKFGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTYLTF 341

Query: 241 ------------------------------------------------------------ 249
                                                                       
Sbjct: 342 ADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFV 401

BLAST of PI0000202 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.2e-59
Identity = 165/505 (32.67%), Postives = 197/505 (39.01%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+RRV+F MDS KAPGPDGFS GF+KGAW++VGEDF
Sbjct: 384 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDF 443

Query: 61  CDAVLHFFDTCYLPL--------------------------------------------- 120
           C+AVLHFF+TCYLP+                                             
Sbjct: 444 CNAVLHFFETCYLPIGVNATAITLIPKHIGAERLEDFRPISCCNVLYKCISKILADRLRL 503

Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
                                     +E V G H +SG PRC +KVDLQKAYDS      
Sbjct: 504 WLPSFISSNQSAFIPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 563

Query: 181 ------------------------------------------------------------ 231
                                                                       
Sbjct: 564 FGLLIAIGTPLKFVSWIRACVTSSMFSIMINGSLEGFFNGRKGLRQGDPLSPFLFVMVME 623

BLAST of PI0000202 vs. ExPASy TrEMBL
Match: A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 153/444 (34.46%), Postives = 186/444 (41.89%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+RRV+F MDS KAPGPDGFS GFFKGAW+++GEDF
Sbjct: 306 IDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEDF 365

Query: 61  CDAVLHFFDTCYLPL--------------------------------------------- 120
           CDAVLHFF+T YLP+                                             
Sbjct: 366 CDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISCCNVLYKCISKILADRLRV 425

Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
                                     +E V G H +SG PRC +KVDLQKAYDS      
Sbjct: 426 WLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 485

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 486 FGLQISISTPLKKGVRQGDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGELSGL 545

Query: 241 ---------------------------------------------------------RIT 249
                                                                    RIT
Sbjct: 546 FANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRIT 605

BLAST of PI0000202 vs. ExPASy TrEMBL
Match: A0A5D3DSA8 (Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002870 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.8e-55
Identity = 146/414 (35.27%), Postives = 174/414 (42.03%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQFRW E+CC  LQ PI RDE+RRV+F MD+ KAPGPDGFS GFFKG W +VGEDF
Sbjct: 144 IDDIVQFRWPEKCCQALQLPISRDEVRRVLFSMDNGKAPGPDGFSLGFFKGTWTVVGEDF 203

Query: 61  CDAVLHFFDTCYL----------------------------------------------- 120
           CDAVLHFF+TCYL                                               
Sbjct: 204 CDAVLHFFETCYLPSGVNATAITLIPKRSGAERMEDFRPISCCNVLYKCISKILADRLRV 263

Query: 121 --------------------------------------PLRESVGEHGSSGPPRCAMKVD 180
                                                 PL++ V +     P    M ++
Sbjct: 264 WLPSFISSNQSAFIPGRSIIENILLCQELFGLLIAIGTPLKKGVRQGDPLSPFLFVMMME 323

Query: 181 -----LQKAYDS------------------------------------------------ 240
                L K   S                                                
Sbjct: 324 VLSCMLNKIPQSFLFHHRCEKVKLNHLTFADDLMIFCAADESSLRLLLIWLLVWVVLGNL 383

Query: 241 ------------------------RITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWAS 249
                                   RITSRI SW A+VLSF G +QL+RSV RS Q+FWAS
Sbjct: 384 PVRYLGLPLLSGRLRSSDCAPLIQRITSRIRSWFAQVLSFAGRLQLIRSVLRSLQVFWAS 443

BLAST of PI0000202 vs. NCBI nr
Match: XP_031740402.1 (uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharacterized protein LOC116403417 [Cucumis sativus] >XP_031745405.1 uncharacterized protein LOC116405607 [Cucumis sativus] >XP_031745422.1 uncharacterized protein LOC116405638 [Cucumis sativus] >XP_031745640.1 uncharacterized protein LOC116406072 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 2.3e-72
Identity = 170/444 (38.29%), Postives = 201/444 (45.27%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           +E++VQFRW+EECC  LQ+PI R+E+RRV+F MD  KAPGPDG+S GFFKGAW +VGE F
Sbjct: 209 IEEIVQFRWTEECCQALQSPIGREEVRRVLFSMDGGKAPGPDGYSVGFFKGAWTVVGEGF 268

Query: 61  CDAVLHFFDTCYLP---------------------------------------------- 120
           CD VLHFF+T Y P                                              
Sbjct: 269 CDVVLHFFETNYFPQGVNTTAITLIPKRNGADRLEDFSPISCCSVIYKCISRILADRLRV 328

Query: 121 -------------------------LRESVGE-HGSSGPPRCAMKVDLQKAYD------- 180
                                     +E VG  H   G PRC MKVDLQKAYD       
Sbjct: 329 WLPSFVSGNQPAFIPGRSIIDNILLCQELVGAYHLHRGKPRCTMKVDLQKAYDYVNWDFL 388

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 389 FGLLIAIDDLMIFCTADNHSMSFIKETIKRFGELSGLFANLAKSLIFLVGVNSSKASRLA 448

Query: 241 ---------------------------------SRITSRIWSWSARVLSFVGTIQLVRSV 249
                                             RITSRI SWSARVLSF G +QLVRSV
Sbjct: 449 ANMGFSIGHLPVRYLGLPLLSRRLRSSDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSV 508

BLAST of PI0000202 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 2.8e-70
Identity = 142/249 (57.03%), Postives = 175/249 (70.28%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+R V+F MDS KAPGPDGFS GFFKGAW+++GE+F
Sbjct: 331 IDDIVQFQWSEECCQALQVPISREEVRSVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEEF 390

Query: 61  CDAVLHFFDTCYLPLRESVGEHGSSGPPRCAMKVDLQKAYDSRITSRIWSWSARVLSFVG 120
           CDAVLHFF+T YL +   V     +  P+      L+      ITSRI SWSARVLSF G
Sbjct: 391 CDAVLHFFETYYLLV--GVNATAITLIPKHNGAERLE-----HITSRIRSWSARVLSFAG 450

Query: 121 TIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRLLMSGKEDGRGGAKVAWVDVCRSFEEGG 180
            +QLVRSV RS Q++WASV VLPA VH+E   L   G  DG      AW ++  + +   
Sbjct: 451 RLQLVRSVLRSLQVYWASVFVLPAYVHNEEGGL---GIRDG-----TAW-NIASTLKILW 510

Query: 181 LNIQE-GSLWVAWVESYILKGRSLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQ 240
           L +   GSLWVAWVE+YILKGRSLW VD+ V RSW LRAILR R+  ++HV M+VG+G +
Sbjct: 511 LMLTNLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILRKREKLKQHVRMKVGNGNR 563

Query: 241 CRVWLDPWL 249
           CRVWLDPWL
Sbjct: 571 CRVWLDPWL 563

BLAST of PI0000202 vs. NCBI nr
Match: KAA0059752.1 (F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-68
Identity = 175/498 (35.14%), Postives = 206/498 (41.37%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+RRV+F MDS KAPGPDGF  GFFKGAW++VGEDF
Sbjct: 102 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDF 161

Query: 61  CDAVLHFFDTCYLPL--------------------------------------------- 120
           CDAVLHFF+TCYLP+                                             
Sbjct: 162 CDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRV 221

Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
                                     +E V G H +SG PRC +KVD QKAYDS      
Sbjct: 222 WLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFL 281

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 282 FGLLIAIGTPLKFGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTYLTF 341

Query: 241 ------------------------------------------------------------ 249
                                                                       
Sbjct: 342 ADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFV 401

BLAST of PI0000202 vs. NCBI nr
Match: KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 6.5e-59
Identity = 165/505 (32.67%), Postives = 197/505 (39.01%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+RRV+F MDS KAPGPDGFS GF+KGAW++VGEDF
Sbjct: 384 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDF 443

Query: 61  CDAVLHFFDTCYLPL--------------------------------------------- 120
           C+AVLHFF+TCYLP+                                             
Sbjct: 444 CNAVLHFFETCYLPIGVNATAITLIPKHIGAERLEDFRPISCCNVLYKCISKILADRLRL 503

Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
                                     +E V G H +SG PRC +KVDLQKAYDS      
Sbjct: 504 WLPSFISSNQSAFIPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 563

Query: 181 ------------------------------------------------------------ 231
                                                                       
Sbjct: 564 FGLLIAIGTPLKFVSWIRACVTSSMFSIMINGSLEGFFNGRKGLRQGDPLSPFLFVMVME 623

BLAST of PI0000202 vs. NCBI nr
Match: XP_008452126.1 (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-57
Identity = 153/444 (34.46%), Postives = 186/444 (41.89%), Query Frame = 0

Query: 1   MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
           ++ +VQF+WSEECC  LQ PI R+E+RRV+F MDS KAPGPDGFS GFFKGAW+++GEDF
Sbjct: 306 IDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEDF 365

Query: 61  CDAVLHFFDTCYLPL--------------------------------------------- 120
           CDAVLHFF+T YLP+                                             
Sbjct: 366 CDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISCCNVLYKCISKILADRLRV 425

Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
                                     +E V G H +SG PRC +KVDLQKAYDS      
Sbjct: 426 WLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 485

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 486 FGLQISISTPLKKGVRQGDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGELSGL 545

Query: 241 ---------------------------------------------------------RIT 249
                                                                    RIT
Sbjct: 546 FANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRIT 605

BLAST of PI0000202 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 59/150 (39.33%), Postives = 75/150 (50.00%), Query Frame = 0

Query: 103 RITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRL----LMSGK 162
           +I  RI  W+AR LSF G +QL+ SV  S   FW S   LP+    E+D +    L SG 
Sbjct: 48  KIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGP 107

Query: 163 EDGRGGAKVAWVDVCRSFEEGGLNIQEGSLWVAWVESYILKGRSLWSVD-NGVCRSWSLR 222
           E     AKVAW DVC   +EGGL I+  SL  A       KG S WS+  N    SW  +
Sbjct: 108 ELNTKKAKVAWSDVCTPKDEGGLGIR--SLKEA------NKG-SFWSISGNTTLGSWMWK 167

Query: 223 AILRHRDIFRKHVHMEVGDGRQCRVWLDPW 248
            IL+HR +    V  ++ +G     W D W
Sbjct: 168 KILKHRALASGFVKHDIHNGSNTSFWFDNW 188

BLAST of PI0000202 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06
Identity = 28/67 (41.79%), Postives = 36/67 (53.73%), Query Frame = 0

Query: 7   FRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDFCDAVLH 66
           FR ++   S L A     EI   VF M  +KAPGPD F+A FF  +W +V +    AV  
Sbjct: 517 FRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKE 576

Query: 67  FFDTCYL 74
           FF T +L
Sbjct: 577 FFRTGHL 583

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F62.6e-1026.01Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A5A7UVV01.4e-7057.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UV011.7e-6835.14F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 S... [more]
A0A5A7TZS03.2e-5932.67Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3BSI81.0e-5734.46uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=... [more]
A0A5D3DSA82.8e-5535.27Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa ... [more]
Match NameE-valueIdentityDescription
XP_031740402.12.3e-7238.29uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharact... [more]
KAA0057641.12.8e-7057.03hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa][more]
KAA0059752.13.5e-6835.14F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa... [more]
KAA0046851.16.5e-5932.67uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa][more]
XP_008452126.12.1e-5734.46PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G24255.11.2e-1839.33RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT1G43760.15.2e-0641.79DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 103..207
NoneNo IPR availablePANTHERPTHR33116:SF20RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE)-RELATED FAMILY PROTEINcoord: 103..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000202.1PI0000202.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane