Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTAGTTCAGTTTAGGTGGTCAGAGGAGTGTTGTAGTGTATTACAAGCTCCTATTAGGCGTGATGAGATTAGGAGGGTGGTTTTTGATATGGATAGTAGTAAGGCTCCTGGGCCTGATGGTTTTTCAGCTGGGTTCTTCAAAGGTGCTTGGAATATGGTTGGTGAGGATTTTTGTGATGCTGTGTTGCATTTCTTTGATACATGTTATCTGCCTCTTAGGGTAAATGCTACTACGATCACCCTCATTCTCAAACGTTGTGGGGGCTAAGCCTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTCTATAAGTGCATTTCTAAGATTTTGGCGAATAGACTTCGTGTGTGGCTTCCGTCTTTTATCAGTGGTAATCAGTCCGCCTATGTTGTGGGGAGGAGTATTGTTGATAACATTATGCTTTATCAGGAGTCGGTGGGGGAACATGGTTCTTCTGGGCCTCCTAGGTGTGCAATGAAGGTAGATCTTCAGAAGGCTTACGATTCGGTGAATTGGGATTTTCTGTTCAGCTTGTTGCTTGCTATAGGCGCTCCCTTGCATTTTTTTAGTTGGATTAGGGCGTGTGTTACGTCCCCTATGTTCTCTATCATGGTTAATGGTTCTGTCGAAAGGTTCTTTCTTGGTACAAAAGGGTTGCGGCAAGGTGACCCTTTATCCCCTTTTTTGTTTGTGATGGTTGTGGAGGTGCTCACTTGTCTTTTGAATAGGCCCTCTCTGGATTTCAGGTATCATCATCGTTGAGAAAGTTTGTTTGACCCATCTAACCTTCGCTGATTATCTTATGATTTTTTGTTATGCTGATACCGCTTCTATTAGCTTTGTGCGCAAGACTCTCCGTCATTTTGGGGAGATATCGGGGTTGATTGCTAATCTGGGGAAGAGCTCTATGTTTGTGGGGGGGGGGGGTTGACAATGAGACTGCTACTGTGTTGGCGGATAGTATGGGGTTTGCTCTAGGTACTCTGCATGTTCGTTACTTGGGTATTCCCTTACTCTCTGGTCGACTGCGTTCTTCGGATTGTGCTCCTCTCATCTAGCGTATTACTAGTCGGATTTGGTCCTGGTCGGCTAGAGTTTTGTCCTTCGTTGGTACAATTCAGCTTGTGCGTTCGGTGTTTCGAAGTTTTCAGATCTTTTGGGCCAGTGTGATTGTTTTGCCGGCTGGGGTGCATCATGAGGTTGATAGACTTTTGATGTCGTATCTGTGAAGGGGTAAGGAGGATGGGAGAGGAGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGGTCGTTTGAGGAAGGGGGTCTTAATATTCAGGAGGGTAAGTCGTGGAACAACGCGTGTATCTTGAAGGTTCTTTGGTTGATATATGTTGACTAGTTTAGGGTCTCTATGGGTTGCTTGGGTGGAGTCCTATATTCTGAAGGGGCGGTCGTTGTGGTCTGTGGATAATGGAGTTTGTCGGTCCTGGAGTCTTCGTGCTATTTTGCGGCATCGTGATATCTTTAGAAAGCATGTCCATATGGAGGTTGGTGATGGGAGGCAGTGTCGGGTGTGGCTTGACCCTTGGCTGCACTGA
mRNA sequence
ATGGAGAAGGTAGTTCAGTTTAGGTGGTCAGAGGAGTGTTGTAGTGTATTACAAGCTCCTATTAGGCGTGATGAGATTAGGAGGGTGGTTTTTGATATGGATAGTAGTAAGGCTCCTGGGCCTGATGGTTTTTCAGCTGGGTTCTTCAAAGGTGCTTGGAATATGGTTGGTGAGGATTTTTGTGATGCTGTGTTGCATTTCTTTGATACATGTTATCTGCCTCTTAGGGAGTCGGTGGGGGAACATGGTTCTTCTGGGCCTCCTAGGTGTGCAATGAAGGTAGATCTTCAGAAGGCTTACGATTCGCGTATTACTAGTCGGATTTGGTCCTGGTCGGCTAGAGTTTTGTCCTTCGTTGGTACAATTCAGCTTGTGCGTTCGGTGTTTCGAAGTTTTCAGATCTTTTGGGCCAGTGTGATTGTTTTGCCGGCTGGGGTGCATCATGAGGTTGATAGACTTTTGATGTCGGGTAAGGAGGATGGGAGAGGAGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGGTCGTTTGAGGAAGGGGGTCTTAATATTCAGGAGGGGTCTCTATGGGTTGCTTGGGTGGAGTCCTATATTCTGAAGGGGCGGTCGTTGTGGTCTGTGGATAATGGAGTTTGTCGGTCCTGGAGTCTTCGTGCTATTTTGCGGCATCGTGATATCTTTAGAAAGCATGTCCATATGGAGGTTGGTGATGGGAGGCAGTGTCGGGTGTGGCTTGACCCTTGGCTGCACTGA
Coding sequence (CDS)
ATGGAGAAGGTAGTTCAGTTTAGGTGGTCAGAGGAGTGTTGTAGTGTATTACAAGCTCCTATTAGGCGTGATGAGATTAGGAGGGTGGTTTTTGATATGGATAGTAGTAAGGCTCCTGGGCCTGATGGTTTTTCAGCTGGGTTCTTCAAAGGTGCTTGGAATATGGTTGGTGAGGATTTTTGTGATGCTGTGTTGCATTTCTTTGATACATGTTATCTGCCTCTTAGGGAGTCGGTGGGGGAACATGGTTCTTCTGGGCCTCCTAGGTGTGCAATGAAGGTAGATCTTCAGAAGGCTTACGATTCGCGTATTACTAGTCGGATTTGGTCCTGGTCGGCTAGAGTTTTGTCCTTCGTTGGTACAATTCAGCTTGTGCGTTCGGTGTTTCGAAGTTTTCAGATCTTTTGGGCCAGTGTGATTGTTTTGCCGGCTGGGGTGCATCATGAGGTTGATAGACTTTTGATGTCGGGTAAGGAGGATGGGAGAGGAGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGGTCGTTTGAGGAAGGGGGTCTTAATATTCAGGAGGGGTCTCTATGGGTTGCTTGGGTGGAGTCCTATATTCTGAAGGGGCGGTCGTTGTGGTCTGTGGATAATGGAGTTTGTCGGTCCTGGAGTCTTCGTGCTATTTTGCGGCATCGTGATATCTTTAGAAAGCATGTCCATATGGAGGTTGGTGATGGGAGGCAGTGTCGGGTGTGGCTTGACCCTTGGCTGCACTGA
Protein sequence
MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDFCDAVLHFFDTCYLPLRESVGEHGSSGPPRCAMKVDLQKAYDSRITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRLLMSGKEDGRGGAKVAWVDVCRSFEEGGLNIQEGSLWVAWVESYILKGRSLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQCRVWLDPWLH
Homology
BLAST of PI0000202 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 2.6e-10
Identity = 45/173 (26.01%), Postives = 71/173 (41.04%), Query Frame = 0
Query: 103 RITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRL----LMSGK 162
R++SR+ W + LSF G + L ++V S + S I+LP + + +D+L L
Sbjct: 19 RVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGST 78
Query: 163 EDGRGGAKVAWVDVCRSFEEGGLNI--------------------QEGSLWVAWVESYIL 222
+ + V W VC +EGGL + ++ SLW ++
Sbjct: 79 AEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYH 138
Query: 223 KGR---SLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQCRVWLDPWL 249
G S W + G S + RD+ V GDG+Q R W D W+
Sbjct: 139 VGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWV 191
BLAST of PI0000202 vs. ExPASy TrEMBL
Match:
A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 1.4e-70
Identity = 142/249 (57.03%), Postives = 175/249 (70.28%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+R V+F MDS KAPGPDGFS GFFKGAW+++GE+F
Sbjct: 331 IDDIVQFQWSEECCQALQVPISREEVRSVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEEF 390
Query: 61 CDAVLHFFDTCYLPLRESVGEHGSSGPPRCAMKVDLQKAYDSRITSRIWSWSARVLSFVG 120
CDAVLHFF+T YL + V + P+ L+ ITSRI SWSARVLSF G
Sbjct: 391 CDAVLHFFETYYLLV--GVNATAITLIPKHNGAERLE-----HITSRIRSWSARVLSFAG 450
Query: 121 TIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRLLMSGKEDGRGGAKVAWVDVCRSFEEGG 180
+QLVRSV RS Q++WASV VLPA VH+E L G DG AW ++ + +
Sbjct: 451 RLQLVRSVLRSLQVYWASVFVLPAYVHNEEGGL---GIRDG-----TAW-NIASTLKILW 510
Query: 181 LNIQE-GSLWVAWVESYILKGRSLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQ 240
L + GSLWVAWVE+YILKGRSLW VD+ V RSW LRAILR R+ ++HV M+VG+G +
Sbjct: 511 LMLTNLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILRKREKLKQHVRMKVGNGNR 563
Query: 241 CRVWLDPWL 249
CRVWLDPWL
Sbjct: 571 CRVWLDPWL 563
BLAST of PI0000202 vs. ExPASy TrEMBL
Match:
A0A5A7UV01 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.7e-68
Identity = 175/498 (35.14%), Postives = 206/498 (41.37%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+RRV+F MDS KAPGPDGF GFFKGAW++VGEDF
Sbjct: 102 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDF 161
Query: 61 CDAVLHFFDTCYLPL--------------------------------------------- 120
CDAVLHFF+TCYLP+
Sbjct: 162 CDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRV 221
Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
+E V G H +SG PRC +KVD QKAYDS
Sbjct: 222 WLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFL 281
Query: 181 ------------------------------------------------------------ 240
Sbjct: 282 FGLLIAIGTPLKFGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTYLTF 341
Query: 241 ------------------------------------------------------------ 249
Sbjct: 342 ADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFV 401
BLAST of PI0000202 vs. ExPASy TrEMBL
Match:
A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 3.2e-59
Identity = 165/505 (32.67%), Postives = 197/505 (39.01%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+RRV+F MDS KAPGPDGFS GF+KGAW++VGEDF
Sbjct: 384 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDF 443
Query: 61 CDAVLHFFDTCYLPL--------------------------------------------- 120
C+AVLHFF+TCYLP+
Sbjct: 444 CNAVLHFFETCYLPIGVNATAITLIPKHIGAERLEDFRPISCCNVLYKCISKILADRLRL 503
Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
+E V G H +SG PRC +KVDLQKAYDS
Sbjct: 504 WLPSFISSNQSAFIPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 563
Query: 181 ------------------------------------------------------------ 231
Sbjct: 564 FGLLIAIGTPLKFVSWIRACVTSSMFSIMINGSLEGFFNGRKGLRQGDPLSPFLFVMVME 623
BLAST of PI0000202 vs. ExPASy TrEMBL
Match:
A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)
HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 153/444 (34.46%), Postives = 186/444 (41.89%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+RRV+F MDS KAPGPDGFS GFFKGAW+++GEDF
Sbjct: 306 IDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEDF 365
Query: 61 CDAVLHFFDTCYLPL--------------------------------------------- 120
CDAVLHFF+T YLP+
Sbjct: 366 CDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISCCNVLYKCISKILADRLRV 425
Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
+E V G H +SG PRC +KVDLQKAYDS
Sbjct: 426 WLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 485
Query: 181 ------------------------------------------------------------ 240
Sbjct: 486 FGLQISISTPLKKGVRQGDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGELSGL 545
Query: 241 ---------------------------------------------------------RIT 249
RIT
Sbjct: 546 FANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRIT 605
BLAST of PI0000202 vs. ExPASy TrEMBL
Match:
A0A5D3DSA8 (Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002870 PE=4 SV=1)
HSP 1 Score: 225.3 bits (573), Expect = 2.8e-55
Identity = 146/414 (35.27%), Postives = 174/414 (42.03%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQFRW E+CC LQ PI RDE+RRV+F MD+ KAPGPDGFS GFFKG W +VGEDF
Sbjct: 144 IDDIVQFRWPEKCCQALQLPISRDEVRRVLFSMDNGKAPGPDGFSLGFFKGTWTVVGEDF 203
Query: 61 CDAVLHFFDTCYL----------------------------------------------- 120
CDAVLHFF+TCYL
Sbjct: 204 CDAVLHFFETCYLPSGVNATAITLIPKRSGAERMEDFRPISCCNVLYKCISKILADRLRV 263
Query: 121 --------------------------------------PLRESVGEHGSSGPPRCAMKVD 180
PL++ V + P M ++
Sbjct: 264 WLPSFISSNQSAFIPGRSIIENILLCQELFGLLIAIGTPLKKGVRQGDPLSPFLFVMMME 323
Query: 181 -----LQKAYDS------------------------------------------------ 240
L K S
Sbjct: 324 VLSCMLNKIPQSFLFHHRCEKVKLNHLTFADDLMIFCAADESSLRLLLIWLLVWVVLGNL 383
Query: 241 ------------------------RITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWAS 249
RITSRI SW A+VLSF G +QL+RSV RS Q+FWAS
Sbjct: 384 PVRYLGLPLLSGRLRSSDCAPLIQRITSRIRSWFAQVLSFAGRLQLIRSVLRSLQVFWAS 443
BLAST of PI0000202 vs. NCBI nr
Match:
XP_031740402.1 (uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharacterized protein LOC116403417 [Cucumis sativus] >XP_031745405.1 uncharacterized protein LOC116405607 [Cucumis sativus] >XP_031745422.1 uncharacterized protein LOC116405638 [Cucumis sativus] >XP_031745640.1 uncharacterized protein LOC116406072 [Cucumis sativus])
HSP 1 Score: 283.1 bits (723), Expect = 2.3e-72
Identity = 170/444 (38.29%), Postives = 201/444 (45.27%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
+E++VQFRW+EECC LQ+PI R+E+RRV+F MD KAPGPDG+S GFFKGAW +VGE F
Sbjct: 209 IEEIVQFRWTEECCQALQSPIGREEVRRVLFSMDGGKAPGPDGYSVGFFKGAWTVVGEGF 268
Query: 61 CDAVLHFFDTCYLP---------------------------------------------- 120
CD VLHFF+T Y P
Sbjct: 269 CDVVLHFFETNYFPQGVNTTAITLIPKRNGADRLEDFSPISCCSVIYKCISRILADRLRV 328
Query: 121 -------------------------LRESVGE-HGSSGPPRCAMKVDLQKAYD------- 180
+E VG H G PRC MKVDLQKAYD
Sbjct: 329 WLPSFVSGNQPAFIPGRSIIDNILLCQELVGAYHLHRGKPRCTMKVDLQKAYDYVNWDFL 388
Query: 181 ------------------------------------------------------------ 240
Sbjct: 389 FGLLIAIDDLMIFCTADNHSMSFIKETIKRFGELSGLFANLAKSLIFLVGVNSSKASRLA 448
Query: 241 ---------------------------------SRITSRIWSWSARVLSFVGTIQLVRSV 249
RITSRI SWSARVLSF G +QLVRSV
Sbjct: 449 ANMGFSIGHLPVRYLGLPLLSRRLRSSDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSV 508
BLAST of PI0000202 vs. NCBI nr
Match:
KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 276.2 bits (705), Expect = 2.8e-70
Identity = 142/249 (57.03%), Postives = 175/249 (70.28%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+R V+F MDS KAPGPDGFS GFFKGAW+++GE+F
Sbjct: 331 IDDIVQFQWSEECCQALQVPISREEVRSVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEEF 390
Query: 61 CDAVLHFFDTCYLPLRESVGEHGSSGPPRCAMKVDLQKAYDSRITSRIWSWSARVLSFVG 120
CDAVLHFF+T YL + V + P+ L+ ITSRI SWSARVLSF G
Sbjct: 391 CDAVLHFFETYYLLV--GVNATAITLIPKHNGAERLE-----HITSRIRSWSARVLSFAG 450
Query: 121 TIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRLLMSGKEDGRGGAKVAWVDVCRSFEEGG 180
+QLVRSV RS Q++WASV VLPA VH+E L G DG AW ++ + +
Sbjct: 451 RLQLVRSVLRSLQVYWASVFVLPAYVHNEEGGL---GIRDG-----TAW-NIASTLKILW 510
Query: 181 LNIQE-GSLWVAWVESYILKGRSLWSVDNGVCRSWSLRAILRHRDIFRKHVHMEVGDGRQ 240
L + GSLWVAWVE+YILKGRSLW VD+ V RSW LRAILR R+ ++HV M+VG+G +
Sbjct: 511 LMLTNLGSLWVAWVEAYILKGRSLWDVDSRVGRSWCLRAILRKREKLKQHVRMKVGNGNR 563
Query: 241 CRVWLDPWL 249
CRVWLDPWL
Sbjct: 571 CRVWLDPWL 563
BLAST of PI0000202 vs. NCBI nr
Match:
KAA0059752.1 (F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa])
HSP 1 Score: 269.2 bits (687), Expect = 3.5e-68
Identity = 175/498 (35.14%), Postives = 206/498 (41.37%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+RRV+F MDS KAPGPDGF GFFKGAW++VGEDF
Sbjct: 102 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFFTGFFKGAWSVVGEDF 161
Query: 61 CDAVLHFFDTCYLPL--------------------------------------------- 120
CDAVLHFF+TCYLP+
Sbjct: 162 CDAVLHFFETCYLPVGVNATAITLIPKHNGAERLEDFRLISCCNVLYKCISKILADRLRV 221
Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
+E V G H +SG PRC +KVD QKAYDS
Sbjct: 222 WLPSFISSNQSAFVPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFL 281
Query: 181 ------------------------------------------------------------ 240
Sbjct: 282 FGLLIAIGTPLKFGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTYLTF 341
Query: 241 ------------------------------------------------------------ 249
Sbjct: 342 ADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFV 401
BLAST of PI0000202 vs. NCBI nr
Match:
KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 238.4 bits (607), Expect = 6.5e-59
Identity = 165/505 (32.67%), Postives = 197/505 (39.01%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+RRV+F MDS KAPGPDGFS GF+KGAW++VGEDF
Sbjct: 384 IDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDF 443
Query: 61 CDAVLHFFDTCYLPL--------------------------------------------- 120
C+AVLHFF+TCYLP+
Sbjct: 444 CNAVLHFFETCYLPIGVNATAITLIPKHIGAERLEDFRPISCCNVLYKCISKILADRLRL 503
Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
+E V G H +SG PRC +KVDLQKAYDS
Sbjct: 504 WLPSFISSNQSAFIPGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 563
Query: 181 ------------------------------------------------------------ 231
Sbjct: 564 FGLLIAIGTPLKFVSWIRACVTSSMFSIMINGSLEGFFNGRKGLRQGDPLSPFLFVMVME 623
BLAST of PI0000202 vs. NCBI nr
Match:
XP_008452126.1 (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])
HSP 1 Score: 233.4 bits (594), Expect = 2.1e-57
Identity = 153/444 (34.46%), Postives = 186/444 (41.89%), Query Frame = 0
Query: 1 MEKVVQFRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDF 60
++ +VQF+WSEECC LQ PI R+E+RRV+F MDS KAPGPDGFS GFFKGAW+++GEDF
Sbjct: 306 IDDIVQFQWSEECCQALQVPISREEVRRVLFSMDSGKAPGPDGFSVGFFKGAWSVIGEDF 365
Query: 61 CDAVLHFFDTCYLPL--------------------------------------------- 120
CDAVLHFF+T YLP+
Sbjct: 366 CDAVLHFFETYYLPVGVNATAITLIPKHNGAERLEDFRPISCCNVLYKCISKILADRLRV 425
Query: 121 --------------------------RESV-GEHGSSGPPRCAMKVDLQKAYDS------ 180
+E V G H +SG PRC +KVDLQKAYDS
Sbjct: 426 WLPSFISSNQSAFILGRSIIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFL 485
Query: 181 ------------------------------------------------------------ 240
Sbjct: 486 FGLQISISTPLKKGVRQGDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGELSGL 545
Query: 241 ---------------------------------------------------------RIT 249
RIT
Sbjct: 546 FANPRKSSIFIAGVNNENASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRIT 605
BLAST of PI0000202 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 59/150 (39.33%), Postives = 75/150 (50.00%), Query Frame = 0
Query: 103 RITSRIWSWSARVLSFVGTIQLVRSVFRSFQIFWASVIVLPAGVHHEVDRL----LMSGK 162
+I RI W+AR LSF G +QL+ SV S FW S LP+ E+D + L SG
Sbjct: 48 KIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGP 107
Query: 163 EDGRGGAKVAWVDVCRSFEEGGLNIQEGSLWVAWVESYILKGRSLWSVD-NGVCRSWSLR 222
E AKVAW DVC +EGGL I+ SL A KG S WS+ N SW +
Sbjct: 108 ELNTKKAKVAWSDVCTPKDEGGLGIR--SLKEA------NKG-SFWSISGNTTLGSWMWK 167
Query: 223 AILRHRDIFRKHVHMEVGDGRQCRVWLDPW 248
IL+HR + V ++ +G W D W
Sbjct: 168 KILKHRALASGFVKHDIHNGSNTSFWFDNW 188
BLAST of PI0000202 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06
Identity = 28/67 (41.79%), Postives = 36/67 (53.73%), Query Frame = 0
Query: 7 FRWSEECCSVLQAPIRRDEIRRVVFDMDSSKAPGPDGFSAGFFKGAWNMVGEDFCDAVLH 66
FR ++ S L A EI VF M +KAPGPD F+A FF +W +V + AV
Sbjct: 517 FRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKE 576
Query: 67 FFDTCYL 74
FF T +L
Sbjct: 577 FFRTGHL 583
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 2.6e-10 | 26.01 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UVV0 | 1.4e-70 | 57.03 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7UV01 | 1.7e-68 | 35.14 | F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 S... | [more] |
A0A5A7TZS0 | 3.2e-59 | 32.67 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A1S3BSI8 | 1.0e-57 | 34.46 | uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=... | [more] |
A0A5D3DSA8 | 2.8e-55 | 35.27 | Putative non-LTR retroelement reverse transcriptase OS=Cucumis melo var. makuwa ... | [more] |
Match Name | E-value | Identity | Description | |
XP_031740402.1 | 2.3e-72 | 38.29 | uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharact... | [more] |
KAA0057641.1 | 2.8e-70 | 57.03 | hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa] | [more] |
KAA0059752.1 | 3.5e-68 | 35.14 | F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa... | [more] |
KAA0046851.1 | 6.5e-59 | 32.67 | uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa] | [more] |
XP_008452126.1 | 2.1e-57 | 34.46 | PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 1.2e-18 | 39.33 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT1G43760.1 | 5.2e-06 | 41.79 | DNAse I-like superfamily protein | [more] |