PI0000199 (gene) Melon (PI 482460) v1

Overview
NamePI0000199
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 5334191 .. 5334513 (+)
RNA-Seq ExpressionPI0000199
SyntenyPI0000199
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGAAGAAGCTAGCTTTGGTGGTGGTGATGGTGACCATGATATTTACGAGTTCTTTAGCTCGAGATGCCTTGAACGATGAAAATGAAAACGAAGATTACATTCAGCTCTTCTCCGACGGTAGTAACGACGAAGGAGTAGATTACAAAACGATTACCCGAGAAAGATGATGAAAGCTGCACCGACACCGGTACCAACACCACCGCCACCACCCATGTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGATGAACCCTGCTTTTGCAACACTCCACTGGGTGCATCAACGGGACGCTGTGTTTTGTTTTAA

mRNA sequence

ATGGAGGGGAAGAAGCTAGCTTTGGTGGTGGTGATGGTGACCATGATATTTACGAGTTCTTTAGCTCGAGATGCCTTGAACGATGAAAATGAAAACGAAGATTACATTCAGCTCTTCTCCGACGGTAGTAACGACGAAGGAATGATGAAAGCTGCACCGACACCGGTACCAACACCACCGCCACCACCCATGTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGATGAACCCTGCTTTTGCAACACTCCACTGGGTGCATCAACGGGACGCTGTGTTTTGTTTTAA

Coding sequence (CDS)

ATGGAGGGGAAGAAGCTAGCTTTGGTGGTGGTGATGGTGACCATGATATTTACGAGTTCTTTAGCTCGAGATGCCTTGAACGATGAAAATGAAAACGAAGATTACATTCAGCTCTTCTCCGACGGTAGTAACGACGAAGGAATGATGAAAGCTGCACCGACACCGGTACCAACACCACCGCCACCACCCATGTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGATGAACCCTGCTTTTGCAACACTCCACTGGGTGCATCAACGGGACGCTGTGTTTTGTTTTAA

Protein sequence

MEGKKLALVVVMVTMIFTSSLARDALNDENENEDYIQLFSDGSNDEGMMKAAPTPVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF
Homology
BLAST of PI0000199 vs. ExPASy TrEMBL
Match: A0A0A0LGQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35
Identity = 78/113 (69.03%), Postives = 88/113 (77.88%), Query Frame = 0

Query: 1   MEGKKLALVVVMVTMIFTSSLARDALNDE------NENEDYIQLFSDGSNDEG------- 60
           MEGKKLALVV+MV  IFT SLA+DALND+      NEN++YIQLFSDGSND+G       
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60

Query: 61  ---MMKAAPTPVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
              MMK APTP PTPPPPP+CFGNFCGGGLL CDEPCFCN P+GA+ G CVL+
Sbjct: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

BLAST of PI0000199 vs. ExPASy TrEMBL
Match: A0A5D3E3L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9509G00010 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.3e-32
Identity = 74/114 (64.91%), Postives = 84/114 (73.68%), Query Frame = 0

Query: 1   MEGKKLALVVVMVTMIFTSSLARDALN-----DENENEDYIQLFSDGSNDEG-------- 60
           MEGKKLALVVVM TMIFT  LA  ALN     +ENEN++YIQLFSD SN+ G        
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60

Query: 61  ----MMKAAPTPVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
               M+K APTP PTPPPP +C+GNFCGGGLLPCDEPCFC+ PLGA+ G CVL+
Sbjct: 61  YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

BLAST of PI0000199 vs. ExPASy TrEMBL
Match: A0A5A7TKL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001870 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.1e-26
Identity = 63/103 (61.17%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 12  MVTMIFTSSLARDALN-----DENENEDYIQLFSDGSNDEG------------MMKAAPT 71
           M TMIFT  LA  ALN     +ENEN++YIQLFSD SN+ G            M+K APT
Sbjct: 1   MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT 60

Query: 72  PVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
           P PTPPPP +C+GNFCGGGLLPCDEPCFC+ PLGA+ G CVL+
Sbjct: 61  PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

BLAST of PI0000199 vs. NCBI nr
Match: KGN59161.1 (hypothetical protein Csa_002402 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 4.4e-35
Identity = 78/113 (69.03%), Postives = 88/113 (77.88%), Query Frame = 0

Query: 1   MEGKKLALVVVMVTMIFTSSLARDALNDE------NENEDYIQLFSDGSNDEG------- 60
           MEGKKLALVV+MV  IFT SLA+DALND+      NEN++YIQLFSDGSND+G       
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60

Query: 61  ---MMKAAPTPVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
              MMK APTP PTPPPPP+CFGNFCGGGLL CDEPCFCN P+GA+ G CVL+
Sbjct: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

BLAST of PI0000199 vs. NCBI nr
Match: TYK30388.1 (hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 1.7e-31
Identity = 74/114 (64.91%), Postives = 84/114 (73.68%), Query Frame = 0

Query: 1   MEGKKLALVVVMVTMIFTSSLARDALN-----DENENEDYIQLFSDGSNDEG-------- 60
           MEGKKLALVVVM TMIFT  LA  ALN     +ENEN++YIQLFSD SN+ G        
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKND 60

Query: 61  ----MMKAAPTPVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
               M+K APTP PTPPPP +C+GNFCGGGLLPCDEPCFC+ PLGA+ G CVL+
Sbjct: 61  YSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

BLAST of PI0000199 vs. NCBI nr
Match: KAA0043852.1 (hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 6.3e-26
Identity = 63/103 (61.17%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 12  MVTMIFTSSLARDALN-----DENENEDYIQLFSDGSNDEG------------MMKAAPT 71
           M TMIFT  LA  ALN     +ENEN++YIQLFSD SN+ G            M+K APT
Sbjct: 1   MTTMIFTCCLAHVALNEERQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAPT 60

Query: 72  PVPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
           P PTPPPP +C+GNFCGGGLLPCDEPCFC+ PLGA+ G CVL+
Sbjct: 61  PTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

BLAST of PI0000199 vs. NCBI nr
Match: KAG6580718.1 (hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.8 bits (268), Expect = 5.2e-20
Identity = 57/102 (55.88%), Postives = 69/102 (67.65%), Query Frame = 0

Query: 1  MEGKKLALVVVMVTMIFTSSLAR-----DALNDENENEDYIQLFSDGSNDEGMMKAAPTP 60
          MEGKK+ALVV++VTM FTS+LAR     D  ND   +++Y +L       EG  +AAP P
Sbjct: 1  MEGKKVALVVLLVTMAFTSALARNQLIADGSNDRAGSDEYDELIKMA---EGAPEAAPEP 60

Query: 61 VPTPPPPPMCFGNFCGGGLLPCDEPCFCNTPLGASTGRCVLF 98
           P+  P P CFGNFCGGGLLPCDEPCFC  P+G+  G CV F
Sbjct: 61 APS--PRPSCFGNFCGGGLLPCDEPCFCFIPMGSQRGSCVDF 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LGQ32.1e-3569.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1[more]
A0A5D3E3L28.3e-3264.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKL83.1e-2661.17Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KGN59161.14.4e-3569.03hypothetical protein Csa_002402 [Cucumis sativus][more]
TYK30388.11.7e-3164.91hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa][more]
KAA0043852.16.3e-2661.17hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa][more]
KAG6580718.15.2e-2055.88hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000199.1PI0000199.1mRNA