PI0000095 (gene) Melon (PI 482460) v1

Overview
NamePI0000095
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 26956652 .. 26957037 (+)
RNA-Seq ExpressionPI0000095
SyntenyPI0000095
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATATTGAAAATCTCATGTTCCTCTATTTTCCATCATTGTAAAAATATTTTCCTTTTCTTCTTACTCTAAATTCTATTACTCGTCGCCATGTCAGGGCTCATAGACCTATGGACTTCCGAGCAGGCTAAACTCCGCCATGAGGGTGGCTCCTCCCCCACCGCTCCCACCATTGACGGCCCGGTTCGAGCTGATGTGGCTGAAGAAGGAAGATGGAACTTCACTGAGTTAACTCGGGTTTGGGACCGAGTAAGGCGACTCGGTATGAATGGGAAGATGTGTTCAGAAGCTTCTGTTTCTACGTTGGTTGAATATATGAGTCCATAGAGATTCAAAACATCTCATTGTACGTATGGTTCACTTTTAATAAAACTTTCCTTTTTCAA

mRNA sequence

TTTATATTGAAAATCTCATGTTCCTCTATTTTCCATCATTGTAAAAATATTTTCCTTTTCTTCTTACTCTAAATTCTATTACTCGTCGCCATGTCAGGGCTCATAGACCTATGGACTTCCGAGCAGGCTAAACTCCGCCATGAGGGTGGCTCCTCCCCCACCGCTCCCACCATTGACGGCCCGGTTCGAGCTGATGTGGCTGAAGAAGGAAGATGGAACTTCACTGAGTTAACTCGGGTTTGGGACCGAGTAAGGCGACTCGGTATGAATGGGAAGATGTGTTCAGAAGCTTCTGTTTCTACGTTGGTTGAATATATGAGTCCATAGAGATTCAAAACATCTCATTGTACGTATGGTTCACTTTTAATAAAACTTTCCTTTTTCAA

Coding sequence (CDS)

ATGTCAGGGCTCATAGACCTATGGACTTCCGAGCAGGCTAAACTCCGCCATGAGGGTGGCTCCTCCCCCACCGCTCCCACCATTGACGGCCCGGTTCGAGCTGATGTGGCTGAAGAAGGAAGATGGAACTTCACTGAGTTAACTCGGGTTTGGGACCGAGTAAGGCGACTCGGTATGAATGGGAAGATGTGTTCAGAAGCTTCTGTTTCTACGTTGGTTGAATATATGAGTCCATAG

Protein sequence

MSGLIDLWTSEQAKLRHEGGSSPTAPTIDGPVRADVAEEGRWNFTELTRVWDRVRRLGMNGKMCSEASVSTLVEYMSP
Homology
[Close]
BLAST of PI0000095 vs. ExPASy TrEMBL
Match: A0A5D3CQ79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00970 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRHEGGSSPTAPTIDGPVRADVAEEGRWNFTELTRVWDRVRRLGMN 60
          MSGLIDLWTSEQAKLR EGGSSP APT+DGPVR DVAEEGRWNFTELTRVWDRVR+LGMN
Sbjct: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60

Query: 61 GKMCSEASVSTLVEYMSP 79
          GKMCSEASVS LVEYMSP
Sbjct: 61 GKMCSEASVSILVEYMSP 78

[Close]
BLAST of PI0000095 vs. ExPASy TrEMBL
Match: A0A0A0LIK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237730 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-28
Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRHEGGSSPTAPTIDGPVRADVAEEGRWNFTELTRVWDRVRRLGMN 60
          MSGL+DLWTSEQAKLRHEGGSSP APT+      DVAE+GRWN TELTRVWDRVRRLGMN
Sbjct: 1  MSGLVDLWTSEQAKLRHEGGSSPAAPTV------DVAEQGRWNSTELTRVWDRVRRLGMN 60

Query: 61 GKMCSEASVSTLVEYMSP 79
          GKMCSEASV  LVE+MSP
Sbjct: 61 GKMCSEASVCMLVEFMSP 72

[Close]
BLAST of PI0000095 vs. NCBI nr
Match: KAA0045984.1 (hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa] >TYK13600.1 hypothetical protein E5676_scaffold299G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 3.9e-34
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRHEGGSSPTAPTIDGPVRADVAEEGRWNFTELTRVWDRVRRLGMN 60
          MSGLIDLWTSEQAKLR EGGSSP APT+DGPVR DVAEEGRWNFTELTRVWDRVR+LGMN
Sbjct: 1  MSGLIDLWTSEQAKLRGEGGSSPAAPTVDGPVRVDVAEEGRWNFTELTRVWDRVRQLGMN 60

Query: 61 GKMCSEASVSTLVEYMSP 79
          GKMCSEASVS LVEYMSP
Sbjct: 61 GKMCSEASVSILVEYMSP 78

[Close]
BLAST of PI0000095 vs. NCBI nr
Match: KAE8651862.1 (hypothetical protein Csa_006004, partial [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28
Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MSGLIDLWTSEQAKLRHEGGSSPTAPTIDGPVRADVAEEGRWNFTELTRVWDRVRRLGMN 60
          MSGL+DLWTSEQAKLRHEGGSSP APT+      DVAE+GRWN TELTRVWDRVRRLGMN
Sbjct: 7  MSGLVDLWTSEQAKLRHEGGSSPAAPTV------DVAEQGRWNSTELTRVWDRVRRLGMN 66

Query: 61 GKMCSEASVSTLVEYMSP 79
          GKMCSEASV  LVE+MSP
Sbjct: 67 GKMCSEASVCMLVEFMSP 78

The following BLAST results are available for this feature:
BLAST of PI0000095 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000095 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CQ791.9e-3492.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LIK62.0e-2882.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237730 PE=4 SV=1[more]
BLAST of PI0000095 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045984.13.9e-3492.31hypothetical protein E6C27_scaffold243G005370 [Cucumis melo var. makuwa] >TYK136... [more]
KAE8651862.14.2e-2882.05hypothetical protein Csa_006004, partial [Cucumis sativus][more]
BLAST of PI0000095 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000095.1PI0000095.1mRNA