Moctig00543g180 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moctig00543g180
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	30S ribosomal protein S14, chloroplastic
Location	tig00000543_pilon: 71393 .. 71695 (+)
RNA-Seq Expression	Moctig00543g180
Synteny	Moctig00543g180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACGTAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGAAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACAGAGAGCTAACTATCGAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

mRNA sequence

ATGGCACGTAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGAAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACAGAGAGCTAACTATCGAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

Coding sequence (CDS)

ATGGCACGTAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGAAAAGTTCCATCGTTGAGTGAGAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACAGAGAGCTAACTATCGAGACTTTGGGCTATCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

Protein sequence

MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLHRRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW

Homology

[Close]

BLAST of Moctig00543g180 vs. NCBI nr
Match: YP_009456059.1 (ribosomal protein S14 [Momordica charantia] >AUJ21826.1 ribosomal protein S14 [Momordica charantia])

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. NCBI nr
Match: YP_009317384.1 (ribosomal protein S14 [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 [Citrullus lanatus] >YP_009348029.1 ribosomal protein S14 [Citrullus mucosospermus] >YP_009420792.1 ribosomal protein S14 [Citrullus colocynthis] >YP_009431555.1 ribosomal protein S14 [Citrullus amarus] >YP_009431640.1 ribosomal protein S14 [Citrullus rehmii] >YP_009456144.1 ribosomal protein S14 [Lagenaria siceraria] >YP_009525184.1 ribosomal protein S14 [Hodgsonia macrocarpa] >YP_009751651.1 ribosomal protein S14 [Hodgsonia heteroclita] >YP_009751904.1 ribosomal protein S14 [Cyclanthera pedata] >YP_009752073.1 ribosomal protein S14 [Dendrosicyos socotranus] >YP_009752157.1 ribosomal protein S14 [Linnaeosicyos amara] >YP_009752494.1 ribosomal protein S14 [Trichosanthes tubiflora] >YP_009752579.1 ribosomal protein S14 [Trichosanthes homophylla] >YP_009753087.1 ribosomal protein S14 [Corallocarpus boehmii] >YP_009753172.1 ribosomal protein S14 [Trichosanthes truncata] >YP_009753256.1 ribosomal protein S14 [Nothoalsomitra suberosa] >YP_010131092.1 ribosomal protein S14 [Benincasa hispida] >APW82459.1 ribosomal protein S14 [Citrullus lanatus subsp. vulgaris] >QHB75961.1 ribosomal protein S14 [Cucumis melo subsp. melo] >QIT04048.1 ribosomal protein S14 [Luffa aegyptiaca] >QIT05060.1 ribosomal protein S14 [Trichosanthes kirilowii] >QJD26469.1 ribosomal protein S14 [Trichosanthes kirilowii var. japonica] >QKX48471.1 ribosomal protein S14 [Luffa acutangula] >QZL38679.1 ribosomal protein S14 [Citrullus ecirrhosus])

HSP 1 Score: 197.2 bits (500), Expect = 6.7e-47
Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. NCBI nr
Match: YP_009752918.1 (ribosomal protein S14 [Momordica sessilifolia] >QIT05990.1 ribosomal protein S14 [Momordica sessilifolia])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. NCBI nr
Match: QZL38591.1 (ribosomal protein S14 [Citrullus naudinianus])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSL+EKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLNEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. NCBI nr
Match: YP_009945415.1 (ribosomal protein S14 [Sechium edule] >QIT04131.1 ribosomal protein S14 [Sechium edule] >QOE55945.1 ribosomal protein S14 [Sechium edule])

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKK+I KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKQISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy Swiss-Prot
Match: Q4VZN5 (30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 9.7e-49
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIR+SLK EI KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy Swiss-Prot
Match: B1NWE8 (30S ribosomal protein S14, chloroplastic OS=Manihot esculenta OX=3983 GN=rps14 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-47
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHL+RRS KKEI KVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLMRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy Swiss-Prot
Match: A6MM34 (30S ribosomal protein S14, chloroplastic OS=Buxus microphylla OX=153571 GN=rps14 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.4e-47
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKR+KLEQKYHLIRRS KKEI KVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRKKLEQKYHLIRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy Swiss-Prot
Match: Q3C1I0 (30S ribosomal protein S14, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rps14 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-47
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYH IRRS KKEI KVPSLS+KWEI+GKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy Swiss-Prot
Match: Q33C38 (30S ribosomal protein S14, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN=rps14 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.4e-47
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYH IRRS KKEI KVPSLS+KWEI+GKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy TrEMBL
Match: A0A2I6C003 (30S ribosomal protein S14, chloroplastic OS=Momordica charantia OX=3673 GN=rps14 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy TrEMBL
Match: A0A6H0ESP9 (30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps14 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-47
Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy TrEMBL
Match: A0A1P8LE66 (Ribosomal protein S14 OS=Citrullus mucosospermus OX=519315 GN=rps14 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-47
Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy TrEMBL
Match: A0A6M3RTR8 (30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=rps14 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-47
Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. ExPASy TrEMBL
Match: A0A2Z2CGL0 (30S ribosomal protein S14, chloroplastic OS=Coccinia grandis OX=387127 GN=rps14 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-47
Identity = 98/100 (98.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEI KVPSLSEKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGR RANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-46
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60
           MA+KSLI REKKRQKLE+KYHLIRRS KKEI K+PSLSEKW+IHGKLQSPPRNSAPTRLH
Sbjct: 1   MAKKSLIYREKKRQKLEKKYHLIRRSSKKEISKIPSLSEKWKIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGR RANYRDFGLSGHILREMV ACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVQACLLPGATRSSW 100

[Close]

BLAST of Moctig00543g180 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 44.3 bits (103), Expect = 6.8e-05
Identity = 33/93 (35.48%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 10  EKKRQKLEQKYHLIRRSLKKEIRKVPSLSEKWEIHG--KLQSPPRNSAPTRLHRRCFLTG 69
           + +R+ L  ++ L RR L K   K P L  +       KL   PRNSA  R+  RC  TG
Sbjct: 73  DHRRRLLAARFEL-RRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNRCVFTG 132

Query: 70  RQRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           R R+    F +S  + R +     L G T+SSW
Sbjct: 133 RSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

The following BLAST results are available for this feature:

BLAST of Moctig00543g180 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009456059.1	2.7e-48	100.00	ribosomal protein S14 [Momordica charantia] >AUJ21826.1 ribosomal protein S14 [M...	[more]
YP_009317384.1	6.7e-47	98.00	ribosomal protein S14 [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 [...	[more]
YP_009752918.1	1.5e-46	97.00	ribosomal protein S14 [Momordica sessilifolia] >QIT05990.1 ribosomal protein S14...	[more]
QZL38591.1	1.5e-46	97.00	ribosomal protein S14 [Citrullus naudinianus]	[more]
YP_009945415.1	1.5e-46	97.00	ribosomal protein S14 [Sechium edule] >QIT04131.1 ribosomal protein S14 [Sechium...	[more]

BLAST of Moctig00543g180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN5	9.7e-49	96.00	30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=...	[more]
B1NWE8	1.1e-47	94.00	30S ribosomal protein S14, chloroplastic OS=Manihot esculenta OX=3983 GN=rps14 P...	[more]
A6MM34	1.4e-47	94.00	30S ribosomal protein S14, chloroplastic OS=Buxus microphylla OX=153571 GN=rps14...	[more]
Q3C1I0	2.4e-47	94.00	30S ribosomal protein S14, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rps1...	[more]
Q33C38	2.4e-47	94.00	30S ribosomal protein S14, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN...	[more]

BLAST of Moctig00543g180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I6C003	1.3e-48	100.00	30S ribosomal protein S14, chloroplastic OS=Momordica charantia OX=3673 GN=rps14...	[more]
A0A6H0ESP9	3.2e-47	98.00	30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=r...	[more]
A0A1P8LE66	3.2e-47	98.00	Ribosomal protein S14 OS=Citrullus mucosospermus OX=519315 GN=rps14 PE=3 SV=1	[more]
A0A6M3RTR8	3.2e-47	98.00	30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii var. japonic...	[more]
A0A2Z2CGL0	3.2e-47	98.00	30S ribosomal protein S14, chloroplastic OS=Coccinia grandis OX=387127 GN=rps14 ...	[more]

BLAST of Moctig00543g180 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00330.1	1.6e-46	90.00	chloroplast ribosomal protein S14	[more]
AT2G34520.1	6.8e-05	35.48	mitochondrial ribosomal protein S14	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 46..99 e-value: 6.9E-20 score: 70.5
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 3..100
None	No IPR available	GENE3D	1.10.287.1480		coord: 1..90 e-value: 6.0E-33 score: 114.9
None	No IPR available	PANTHER	PTHR19836:SF19	28S RIBOSOMAL PROTEIN S14, MITOCHONDRIAL	coord: 3..100
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..100
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 61..84
IPR023036	Ribosomal protein S14, bacterial/plastid	HAMAP	MF_00537	Ribosomal_S14_1	coord: 1..100 score: 24.562366

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moctig00543g180.1	Moctig00543g180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome