Moctig00278g070 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moctig00278g070
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic
Location	tig00000278_pilon: 15441 .. 16016 (+)
RNA-Seq Expression	Moctig00278g070
Synteny	Moctig00278g070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACATTTCTATTTATTTATCTCTTTTTTTACTACATATAATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTACTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCTTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTACTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAGTGGATTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAACCAAATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTAGCTCGCCAGTAA

mRNA sequence

ATGAAAAACATTTCTATTTATTTATCTCTTTTTTTACTACATATAATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTACTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCTTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTACTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAGTGGATTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAACCAAATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTAGCTCGCCAGTAA

Coding sequence (CDS)

ATGAAAAACATTTCTATTTATTTATCTCTTTTTTTACTACATATAATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTACTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCTTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTACTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAGTGGATTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAACCAAATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTAGCTCGCCAGTAA

Protein sequence

MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ

Homology

[Close]

BLAST of Moctig00278g070 vs. NCBI nr
Match: QJS52349.1 (NADH-plastoquinone oxidoreductase subunit 6 [Indofevillea khasiana])

HSP 1 Score: 340.9 bits (873), Expect = 7.2e-90
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVS 60
           MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLL  NSIYSAFSLGLVLVS
Sbjct: 1   MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLFTNSIYSAFSLGLVLVS 60

Query: 61  ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT 120
           ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT
Sbjct: 61  ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT 120

Query: 121 SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLA 180
           SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGI+LSTYFFLPFELISIILLA
Sbjct: 121 SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIHLSTYFFLPFELISIILLA 180

Query: 181 ALIGAIAVARQ 192
           ALIGAIAVARQ
Sbjct: 181 ALIGAIAVARQ 191

[Close]

BLAST of Moctig00278g070 vs. NCBI nr
Match: YP_010119787.1 (NADH-plastoquinone oxidoreductase subunit 6 [Hemsleya zhejiangensis] >QRC26910.1 NADH-plastoquinone oxidoreductase subunit 6 [Hemsleya zhejiangensis])

HSP 1 Score: 331.3 bits (848), Expect = 5.7e-87
Identity = 182/191 (95.29%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVS 60
           MKNISIYL L LLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLL NSIYSAFSLGLVLVS
Sbjct: 1   MKNISIYLFLILLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLLTNSIYSAFSLGLVLVS 60

Query: 61  ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT 120
           ISLFYILAN+ FVAAAQLLIYVGAINVLIIFAVMFMKGS+YSKDFNLWTVGSGFTFLVCT
Sbjct: 61  ISLFYILANSHFVAAAQLLIYVGAINVLIIFAVMFMKGSDYSKDFNLWTVGSGFTFLVCT 120

Query: 121 SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLA 180
           SIFVSLMTTI+DTSWYGIIWTTRSNQILEQDLISNSQQIGI+LSTYFFLPFELISIILLA
Sbjct: 121 SIFVSLMTTILDTSWYGIIWTTRSNQILEQDLISNSQQIGIHLSTYFFLPFELISIILLA 180

Query: 181 ALIGAIAVARQ 192
           ALIGAIA+ARQ
Sbjct: 181 ALIGAIALARQ 191

[Close]

BLAST of Moctig00278g070 vs. NCBI nr
Match: YP_009456115.1 (NADH dehydrogenase subunit 6 [Momordica charantia] >AUJ21882.1 NADH dehydrogenase subunit 6 [Momordica charantia])

HSP 1 Score: 320.5 bits (820), Expect = 1.0e-83
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. NCBI nr
Match: YP_009752718.1 (NADH dehydrogenase subunit G [Ampelosycios humblotii] >QIT05199.1 NADH dehydrogenase subunit G [Ampelosycios humblotii])

HSP 1 Score: 318.5 bits (815), Expect = 3.8e-83
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLL NNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIF+SLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFISLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. NCBI nr
Match: YP_009752972.1 (NADH dehydrogenase subunit G [Momordica sessilifolia] >QIT06044.1 NADH dehydrogenase subunit G [Momordica sessilifolia])

HSP 1 Score: 318.2 bits (814), Expect = 5.0e-83
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKD NLWTVGSGFTFLVCTSIFVSLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDLNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy Swiss-Prot
Match: Q2QD38 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhG PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 5.5e-85
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLL NNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVG+G TFLVCTSIFVSLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGNGVTFLVCTSIFVSLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy Swiss-Prot
Match: Q49KU5 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhG PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.8e-73
Identity = 150/176 (85.23%), Postives = 161/176 (91.48%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFL+V LGSGLILGS+GV+LL N IYSAFSLGLVLV ISLFYIL+N+ FVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGLILGSLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAIN+LI+FAVMFM GSEY KD NLWTVG G T LVCTSI VSLMTTI+DTSW
Sbjct: 61  AQLLIYVGAINILILFAVMFMNGSEYYKDLNLWTVGDGITSLVCTSILVSLMTTILDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTT+SNQI+EQDLI NSQQIGI+LST FFLPFELISIILL ALIGAIAVARQ
Sbjct: 121 YGIIWTTKSNQIIEQDLIGNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy Swiss-Prot
Match: Q2L958 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhG PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.7e-73
Identity = 149/176 (84.66%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFL+V LGSGLILG +GV+LL N IYSAFSLGLVLV ISLFYIL+N+ FVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLI+FAVMFM GSEY KDFNLWT+G+G T LVCTSI VSL+TTI+DTSW
Sbjct: 61  AQLLIYVGAINVLILFAVMFMNGSEYYKDFNLWTIGNGLTSLVCTSILVSLITTILDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQI+EQDLISNSQQIGI+L+T FFLPFE ISIILL ALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQIIEQDLISNSQQIGIHLATDFFLPFEFISIILLVALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy Swiss-Prot
Match: Q0ZIW5 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhG PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-72
Identity = 150/176 (85.23%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFL+V LGSGLILG +GV+LL N IYSAFSLGLV V ISLFYI +N+ FVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVFVCISLFYIPSNSHFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFM GSEY KDFNLWTVG G T +VCTSIF SL+TTI+DTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMNGSEYYKDFNLWTVGDGVTSVVCTSIFASLITTILDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQI+EQDLISNSQQIGI+LST FFLPFELISIILL ALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy Swiss-Prot
Match: Q68RV3 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Panax ginseng OX=4054 GN=ndhG PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.1e-72
Identity = 148/176 (84.09%), Postives = 161/176 (91.48%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFL+V LGSGLILG +GV+LL N IYSAFSLGLVLV  SLFYIL+N+ FVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSHFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLI+FAVMFM GSEY KDF+LWT+G G T +VCTSIFVSL+TTI DTSW
Sbjct: 61  AQLLIYVGAINVLILFAVMFMNGSEYYKDFHLWTIGDGVTSMVCTSIFVSLITTIPDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTT+SNQI+EQDLISNSQQIGI+LST FFLPFELISIILL ALIGAIAVARQ
Sbjct: 121 YGIIWTTKSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy TrEMBL
Match: A0A6M4SPV0 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Indofevillea khasiana OX=383665 GN=ndhG PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.5e-90
Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0


Query: 1   MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVS 60
           MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLL  NSIYSAFSLGLVLVS
Sbjct: 1   MKNISIYLSLFLLHIMDLPGPIHDFLVVLLGSGLILGSMGVLLFTNSIYSAFSLGLVLVS 60

Query: 61  ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT 120
           ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT
Sbjct: 61  ISLFYILANAQFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCT 120

Query: 121 SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLA 180
           SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGI+LSTYFFLPFELISIILLA
Sbjct: 121 SIFVSLMTTIVDTSWYGIIWTTRSNQILEQDLISNSQQIGIHLSTYFFLPFELISIILLA 180

Query: 181 ALIGAIAVARQ 192
           ALIGAIAVARQ
Sbjct: 181 ALIGAIAVARQ 191

[Close]

BLAST of Moctig00278g070 vs. ExPASy TrEMBL
Match: A0A2I6C049 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Momordica charantia OX=3673 GN=ndhG PE=3 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.9e-84
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy TrEMBL
Match: A0A6H0EUJ1 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Ampelosycios humblotii OX=386639 GN=ndhG PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLL NNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIF+SLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFISLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy TrEMBL
Match: A0A6H0EWJ7 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Momordica sessilifolia OX=703387 GN=ndhG PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.4e-83
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKD NLWTVGSGFTFLVCTSIFVSLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDLNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. ExPASy TrEMBL
Match: A0A6C0U910 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Siraitia siamensis OX=2695833 GN=ndhG PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.4e-83
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFLVVLLGSGLILGSMGVLL NNSIYSAFSLGLVLVSISLFYILANAQFVAA
Sbjct: 1   MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YGIIWTTRSNQILEQDLISNSQQIGI+LSTYFFLPFELISIILLAALIGAIAVARQ
Sbjct: 121 YGIIWTTRSNQILEQDLISNSQQIGIHLSTYFFLPFELISIILLAALIGAIAVARQ 176

[Close]

BLAST of Moctig00278g070 vs. TAIR 10
Match: ATCG01080.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 )

HSP 1 Score: 258.8 bits (660), Expect = 3.3e-69
Identity = 140/176 (79.55%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 16  MDLPGPIHDFLVVLLGSGLILGSMGVLLLNNSIYSAFSLGLVLVSISLFYILANAQFVAA 75
           MDLPGPIHDFL+V LGSGL++G +GV+LL N I+SAFSLG VLV ISL YIL+N+ FVAA
Sbjct: 1   MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAA 60

Query: 76  AQLLIYVGAINVLIIFAVMFMKGSEYSKDFNLWTVGSGFTFLVCTSIFVSLMTTIVDTSW 135
           AQLLIYVGAINVLIIFAVMFM  SEYS DFNLWT+G+G T LVCT+I   LM+TI+DTSW
Sbjct: 61  AQLLIYVGAINVLIIFAVMFMNDSEYSTDFNLWTIGNGITSLVCTTILFLLMSTILDTSW 120

Query: 136 YGIIWTTRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVARQ 192
           YG+IWTT+ NQILEQDLISNSQQIGI+LST FFLPFELISIILL ALIGAI+VARQ
Sbjct: 121 YGVIWTTKLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVARQ 176

The following BLAST results are available for this feature:

BLAST of Moctig00278g070 vs. NCBI nr


Match Name	E-value	Identity	Description
QJS52349.1	7.2e-90	98.43	NADH-plastoquinone oxidoreductase subunit 6 [Indofevillea khasiana]	[more]
YP_010119787.1	5.7e-87	95.29	NADH-plastoquinone oxidoreductase subunit 6 [Hemsleya zhejiangensis] >QRC26910.1...	[more]
YP_009456115.1	1.0e-83	100.00	NADH dehydrogenase subunit 6 [Momordica charantia] >AUJ21882.1 NADH dehydrogenas...	[more]
YP_009752718.1	3.8e-83	98.86	NADH dehydrogenase subunit G [Ampelosycios humblotii] >QIT05199.1 NADH dehydroge...	[more]
YP_009752972.1	5.0e-83	99.43	NADH dehydrogenase subunit G [Momordica sessilifolia] >QIT06044.1 NADH dehydroge...	[more]

BLAST of Moctig00278g070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD38	5.5e-85	98.30	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q49KU5	2.8e-73	85.23	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Eucalyptus globulus s...	[more]
Q2L958	3.7e-73	84.66	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Gossypium hirsutum OX...	[more]
Q0ZIW5	1.1e-72	85.23	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Vitis vinifera OX=297...	[more]
Q68RV3	4.1e-72	84.09	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Panax ginseng OX=4054...	[more]

BLAST of Moctig00278g070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M4SPV0	3.5e-90	98.43	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Indofevillea khasiana...	[more]
A0A2I6C049	4.9e-84	100.00	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Momordica charantia O...	[more]
A0A6H0EUJ1	1.8e-83	98.86	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Ampelosycios humbloti...	[more]
A0A6H0EWJ7	2.4e-83	99.43	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Momordica sessilifoli...	[more]
A0A6C0U910	5.4e-83	98.86	NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Siraitia siamensis OX...	[more]

BLAST of Moctig00278g070 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01080.1	3.3e-69	79.55	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001457	NADH:ubiquinone/plastoquinone oxidoreductase, chain 6	PFAM	PF00499	Oxidored_q3	coord: 38..187 e-value: 1.4E-29 score: 102.6
IPR042106	NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ	GENE3D	1.20.120.1200		coord: 23..190 e-value: 2.5E-33 score: 116.8
None	No IPR available	PANTHER	PTHR33269:SF5	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6	coord: 16..191
None	No IPR available	PANTHER	PTHR33269	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6	coord: 16..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moctig00278g070.1	Moctig00278g070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding