Moc11g31740 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g31740
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 23160711 .. 23161133 (+)
RNA-Seq Expression	Moc11g31740
Synteny	Moc11g31740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTATCTGATGGTGAAGAAGAGGGCTACATAACTATTTTTGATGCTACTGATTACATAGTTGGATGCAATGCAACAGAATATTTCAATGATTTGAAGGTATTTGTTTAAGTTGAAATTTATTATTTCTTTTAGTAAAAAAGCAATAACTAATTTTAATCTCTATTTTGCAGGATGCCAAAAAAAGAAAAAAGTAAGTATTATCGAAATTTGGTAGTTGCGGAAGATAAAAAATACTACTTTTTGGTTAAGATGGACAAAGCTGGAGAAAGTGATCGTGCACGCAAACAAATCATTGTTCAAGAAATTTGCACAGTTGGTTCAATGGCTGGCAAAAAACATGAACAAGATAAAGACGAGAAAAAGACAATTGAAACCCAAGAGAAGAATAAGCGTGCAAAAGTAACGGGAAAAAATTAG

mRNA sequence

ATGCTTGTATCTGATGGTGAAGAAGAGGGCTACATAACTATTTTTGATGCTACTGATTACATAGTTGGATGCAATGCAACAGAATATTTCAATGATTTGAAGATGGACAAAGCTGGAGAAAGTGATCGTGCACGCAAACAAATCATTGTTCAAGAAATTTGCACAGTTGGTTCAATGGCTGGCAAAAAACATGAACAAGATAAAGACGAGAAAAAGACAATTGAAACCCAAGAGAAGAATAAGCGTGCAAAAGTAACGGGAAAAAATTAG

Coding sequence (CDS)

ATGCTTGTATCTGATGGTGAAGAAGAGGGCTACATAACTATTTTTGATGCTACTGATTACATAGTTGGATGCAATGCAACAGAATATTTCAATGATTTGAAGATGGACAAAGCTGGAGAAAGTGATCGTGCACGCAAACAAATCATTGTTCAAGAAATTTGCACAGTTGGTTCAATGGCTGGCAAAAAACATGAACAAGATAAAGACGAGAAAAAGACAATTGAAACCCAAGAGAAGAATAAGCGTGCAAAAGTAACGGGAAAAAATTAG

Protein sequence

MLVSDGEEEGYITIFDATDYIVGCNATEYFNDLKMDKAGESDRARKQIIVQEICTVGSMAGKKHEQDKDEKKTIETQEKNKRAKVTGKN

Homology

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BLAST of Moc11g31740 vs. ExPASy TrEMBL
Match: A0A0A0KP46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G526360 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.8e-04
Identity = 20/52 (38.46%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 1  MLVSDGEEEGYITIFDATDYIVGCNATEYFNDLKMDKAGESDRARKQIIVQE 53
          + +SDG+++ YITIFDA+ Y++GC+ TEY+ DL++ K  +S   +  ++ ++
Sbjct: 4  LTISDGDDKTYITIFDASKYLIGCSVTEYYKDLQVYKKEKSKLYQNLVLCED 55

The following BLAST results are available for this feature:

BLAST of Moc11g31740 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g31740 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g31740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP46	8.8e-04	38.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G526360 PE=4 SV=1	[more]

BLAST of Moc11g31740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g31740.1	Moc11g31740.1	mRNA