Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTTAAAAATTTGGAGTTGTTTAATCAATCTTTATTGGCTAAGCAGGATTGGCGGTTGCTGCGAGACCCTACATCATTGCTTGCCCGTGTTCTACAGGGTTGTTATTTCCGGGATGGTAGCTTTATGACTGCTCGTCTTGGGTGAAATCCATCCTTTATTTGGCGTAGCCTTTTGTGGGGTCAGGATCTGCTTTGTAAGGGGTTGCGTTGGTCTATGGGTAATTGGAAATCCATTCCTGTTTATAGTGCTAACTTGCTTCCTAGAGAGGGCTCGCTTCAAGTTCGGTCTTTGCAACGTCTTCCTATCTATACTAGAGTTTGTGATTTGTTTACAGCTTCGGGTAGGTGGAATGAACAATTGATTCGGAGAAGCTTTGACCTTGAGGAAGCCCAGATTATTTTAGCTATTTCATTGCCTCATCTTCATGTTTCGGACCACCTTATCTGACATTTTTTTATAATGTTGGTATCTTCTTCGTTAAAAGCAGATATCGGGTGGCCCAGCAACAGGATTTGTTGTCTGTATCGTTCTCTTCTTTAAGGGACACCCTTCTGCAATGGTGGAAAGACTTTTAAAACATGCACCTCCCTACTAAAATTAAAATATTTATGTGGCGTCTGTATGGTAATCGACTCCCCATGTGCGAGGCCCTTGTCTGGAGGGGGTTGGCTATTCCGAACTTCTGTTACTTTGTGGAGGTGCCAGTGAGGGTGTCCTTCATCTTTTTTGGTTTTGTGATGTTGTGCAGTTGTTCTGGTTGAACTCGCAATTTGCTCACCTTCGACACTCTTGGCCTGCCCCGTCTATCTCCTTCTTGCTTGTCGATTTGCAGGAGAGAGTCTATTGGCAGGTTTTTTAGGAGCTATCTGTCTTTCTGTAGGCAGTGTGGATTTCGCGTATCAAACTATACACCAGACGTGTGGGTCCTTTGGGCCCACTGGGAAGTTGGGACAAGACACTCAGCATTTCCGATCAGTGACGGCGATTCATTCTCCTATTGGGTCTTTATGTACAAGGCGGAGTTTGTACAGATGGCAGCCCCCCGCAGATGGTTGGGTGAAGGTCAATACTAATGCGTCTTTTTATGCAGCTTCTTTGACGGGGGGTTTAGATGTGTTGACTCGTGATTCACATGATATTGTCCTTCTTGCTGCCACGTTTTATATTCCCCATTGTGCTTCAGTGGATTGGGCAGAGGCTTTGGCGATCAAGGAGGGGTTGGCATTAGCGATTGATATGGGTGTTCGTTCGTTTCTGCTGGAAACTGATTCCTTATGCTGTTTTTGGTTGTTGGATCGGCCTGTGGATGATTGGAAGTTGGTGCTATCCTCTTAG
mRNA sequence
ATGAGTTTTAAAAATTTGGAGTTGTTTAATCAATCTTTATTGGCTAAGCAGGATTGGCGGTTGCTGCGAGACCCTACATCATTGCTTGCCCGTGTTCTACAGGGTTGTTATTTCCGGGATGGTAGCTTTATGACTGCTCGTCTTGGTGCTAACTTGCTTCCTAGAGAGGGCTCGCTTCAAGTTCGGTCTTTGCAACGTCTTCCTATCTATACTAGAGTTTGTGATTTGTTTACAGCTTCGGTTGTTCTGGTTGAACTCGCAATTTGCTCACCTTCGACACTCTTGGCCTGCCCCGTCTATCTCCTTCTTGCTTGTCGATTTGCAGGAGAGAGTCTATTGGCAGGTTTTTTAGGAGCTATCTGTCTTTCTGTAGGCAGTGTGGATTTCGCGTATCAAACTATACACCAGACGTGTGGGTCCTTTGGGCCCACTGGGAAGTTGGGACAAGACACTCAGCATTTCCGATCAGTGACGGCGATTCATTCTCCTATTGGGTCTTTATGTACAAGGCGGAGTTTGTACAGATGGCAGCCCCCCGCAGATGGTTGGGTGAAGGTCAATACTAATGCGTCTTTTTATGCAGCTTCTTTGACGGGGGGTTTAGATGTGTTGACTCGTGATTCACATGATATTGTCCTTCTTGCTGCCACGTTTTATATTCCCCATTGTGCTTCAGTGGATTGGGCAGAGGCTTTGGCGATCAAGGAGGGGTTGGCATTAGCGATTGATATGGGTGTTCGTTCGTTTCTGCTGGAAACTGATTCCTTATGCTGTTTTTGGTTGTTGGATCGGCCTGTGGATGATTGGAAGTTGGTGCTATCCTCTTAG
Coding sequence (CDS)
ATGAGTTTTAAAAATTTGGAGTTGTTTAATCAATCTTTATTGGCTAAGCAGGATTGGCGGTTGCTGCGAGACCCTACATCATTGCTTGCCCGTGTTCTACAGGGTTGTTATTTCCGGGATGGTAGCTTTATGACTGCTCGTCTTGGTGCTAACTTGCTTCCTAGAGAGGGCTCGCTTCAAGTTCGGTCTTTGCAACGTCTTCCTATCTATACTAGAGTTTGTGATTTGTTTACAGCTTCGGTTGTTCTGGTTGAACTCGCAATTTGCTCACCTTCGACACTCTTGGCCTGCCCCGTCTATCTCCTTCTTGCTTGTCGATTTGCAGGAGAGAGTCTATTGGCAGGTTTTTTAGGAGCTATCTGTCTTTCTGTAGGCAGTGTGGATTTCGCGTATCAAACTATACACCAGACGTGTGGGTCCTTTGGGCCCACTGGGAAGTTGGGACAAGACACTCAGCATTTCCGATCAGTGACGGCGATTCATTCTCCTATTGGGTCTTTATGTACAAGGCGGAGTTTGTACAGATGGCAGCCCCCCGCAGATGGTTGGGTGAAGGTCAATACTAATGCGTCTTTTTATGCAGCTTCTTTGACGGGGGGTTTAGATGTGTTGACTCGTGATTCACATGATATTGTCCTTCTTGCTGCCACGTTTTATATTCCCCATTGTGCTTCAGTGGATTGGGCAGAGGCTTTGGCGATCAAGGAGGGGTTGGCATTAGCGATTGATATGGGTGTTCGTTCGTTTCTGCTGGAAACTGATTCCTTATGCTGTTTTTGGTTGTTGGATCGGCCTGTGGATGATTGGAAGTTGGTGCTATCCTCTTAG
Protein sequence
MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLGANLLPREGSLQVRSLQRLPIYTRVCDLFTASVVLVELAICSPSTLLACPVYLLLACRFAGESLLAGFLGAICLSVGSVDFAYQTIHQTCGSFGPTGKLGQDTQHFRSVTAIHSPIGSLCTRRSLYRWQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIPHCASVDWAEALAIKEGLALAIDMGVRSFLLETDSLCCFWLLDRPVDDWKLVLSS
Homology
BLAST of Moc11g31620 vs. NCBI nr
Match:
XP_024196130.1 (uncharacterized protein LOC112199331 [Rosa chinensis])
HSP 1 Score: 82.8 bits (203), Expect = 5.1e-12
Identity = 81/306 (26.47%), Postives = 129/306 (42.16%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLG----------- 60
M FKNL FN+++LAKQ WRLL +P SL+AR+ + YF +G ++TA LG
Sbjct: 352 MGFKNLHWFNKAMLAKQSWRLLHNPNSLIARLYKAIYFPNGEYLTAGLGDTPSFSWRSIV 411
Query: 61 --ANLLPREGSLQVRSLQRLPIYTR--VCDLFTASVVLVELAICSPSTLLACPVYLLLAC 120
+L + QV + +R+ I+ + D++ P + P Y A
Sbjct: 412 EARQVLVQGLRWQVGNGERIEIWNHNWIPDVY-------------PRGPSSPPPY--DAP 471
Query: 121 RFAGE-----------SLLAG------FLGAICLSVGSVDFAYQTIHQTCGSFGPTG--- 180
RF E +LLA A+ ++ + + G PTG
Sbjct: 472 RFVEELIDPITRSWDVNLLASPPPPVDSYKAVWKAIWDAKIPSKEVWHRAGLQLPTGPGD 531
Query: 181 -------KLGQDTQHFRSVTAIHS----------PIGSLCTRRSLYRWQPPADGWVKVNT 240
+L + + S + + + RR L +W P + WVKVN
Sbjct: 532 NFIDWNSQLWEHKKQHASEAVLLTMGWYEEFKKVNVQPTDIRRQLVKWTRPQENWVKVNC 591
Query: 241 NASFYAASLTGGLDVLTRDSHDIVLLAATFYIPHCASVDWAEALAIKEGLALAIDMGVRS 255
+ +F A+ GG V+ RD++ + A +P S AE +A+KEG+ LA+ +
Sbjct: 592 DGAFQPATRKGGAGVVIRDANGAFQVGAARLLPLVTSPFHAELMALKEGINLAVALQHEQ 642
BLAST of Moc11g31620 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 75.5 bits (184), Expect = 8.1e-10
Identity = 93/420 (22.14%), Postives = 145/420 (34.52%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARL------------ 60
M F++LELFN++LLAKQ WR+L P S+L+RVL+G YF+D SFM A++
Sbjct: 646 MGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSIL 705
Query: 61 -----------------------GANLLPREGSLQVRSLQRLPIYTRVCDL-------FT 120
G N +P + +L++ S RLP+ +RV L +
Sbjct: 706 WGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQ 765
Query: 121 ASVVLVELAICSPSTLLACP---------------------------------------- 180
VV E +L+ P
Sbjct: 766 GDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPS 825
Query: 181 ------------------------------------------------------------ 240
Sbjct: 826 SSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGE 885
Query: 241 --VYLLLACRFAGESLLAGFLGAIC---------LSVGSVDFAYQTI-------HQTCGS 251
++L C+FA + G + S+ DF + + +
Sbjct: 886 DSIHLFWICKFAEALWINSKFGKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARA 945
BLAST of Moc11g31620 vs. NCBI nr
Match:
KAE8711725.1 (hypothetical protein F3Y22_tig00110279pilonHSYRG00089 [Hibiscus syriacus])
HSP 1 Score: 75.1 bits (183), Expect = 1.1e-09
Identity = 78/268 (29.10%), Postives = 119/268 (44.40%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLGANLLPREGSLQ 60
+ ++LE+FNQ+ L KQ WRL +L+A+VL+ Y+ DGSF+TA L ++ S++
Sbjct: 82 LGIRDLEVFNQAFLCKQGWRLFNGSKTLVAQVLKAKYYPDGSFLTADLEVLIIFFYVSMR 141
Query: 61 VRSLQRLPIYTRVCDLFTASVVLVELAICSPSTLLACPVYLLL-ACRFAGESLLA----- 120
LQ + + + F + ELA L C + L+ +C G L+
Sbjct: 142 NERLQMPGTFISI-ECFGHNRPREELA-----KSLFCVLSLVAPSCTRRGGCLVGSSSPR 201
Query: 121 ---GFLGAIC-LSVGSVDF-----AYQTIHQTCGSFGPTGKLGQDTQHFRSVTAIHSPIG 180
G G +C LS+ F + + + GSF G G
Sbjct: 202 VTKGTSGNVCFLSLPGPYFLGCGDPWVCDYLSRGSFFGVGSPG----------------- 261
Query: 181 SLCTRRSLYR-WQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIPHCA 240
C + R W P G++KVN + S+ TGG+ + RDS L + IPH
Sbjct: 262 --CGSYPIVRLWTIPPAGFIKVNVDGSYDKDLRTGGICCVLRDSTGQFLAGCSSGIPHAM 321
Query: 241 SVDWAEALAIKEGLALAIDMGVRSFLLE 253
E+LA EGL LA+ +G RS ++E
Sbjct: 322 DAFPVESLACLEGLNLALSLGCRSLVVE 324
BLAST of Moc11g31620 vs. NCBI nr
Match:
XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])
HSP 1 Score: 74.3 bits (181), Expect = 1.8e-09
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 0
Query: 176 WQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIPHCASVDWAEALAIK 235
W PP + KVN +A+F + + GLD+L RDS VLL+A +I H + V AE LA +
Sbjct: 73 WCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFITHVSDVTLAECLAAQ 132
Query: 236 EGLALAIDMGVRSFLLETDSLCCFWLLDRPVDD 269
EG+ LAI+ G+ F +ETDS F LL +D
Sbjct: 133 EGVCLAIEAGLIPFQIETDSSQVFNLLRTDCED 165
BLAST of Moc11g31620 vs. NCBI nr
Match:
XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia])
HSP 1 Score: 73.9 bits (180), Expect = 2.4e-09
Identity = 41/107 (38.32%), Postives = 58/107 (54.21%), Query Frame = 0
Query: 162 SPIGSLCTRRSLYRWQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIP 221
+P T + W PP K+NT+ASF A+ GL ++ R+ V+ +AT Y+
Sbjct: 20 NPFPGRVTNTAEVLWLPPDKRIYKINTDASFLASDQHAGLGIIIRNDRGQVMASATKYLE 79
Query: 222 HCASVDWAEALAIKEGLALAIDMGVRSFLLETDSLCCFWLLDRPVDD 269
+ SVD AEA+ EGL LA +GV +LETDS F L +P +D
Sbjct: 80 NIQSVDMAEAIVAVEGLQLASKIGVNPVILETDSSRIFNLFSQPSED 126
BLAST of Moc11g31620 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 46.2 bits (108), Expect = 6.9e-04
Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLG 50
+ F++L FNQ+LLAKQ +R++ P +LL+R+L+ YF S M +G
Sbjct: 57 LGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVG 105
BLAST of Moc11g31620 vs. ExPASy TrEMBL
Match:
A0A803P8L6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 4.6e-11
Identity = 81/303 (26.73%), Postives = 130/303 (42.90%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARL------------ 60
M F+ LE FNQ+LLAKQ W++L +P L+A+VL+ YF + +F+ A++
Sbjct: 634 MGFRELESFNQALLAKQGWKILTNPDCLMAKVLKALYFPNNNFLEAKVGHYGSHIWRGIV 693
Query: 61 -GANLLPR------EGSLQVRSLQRLPIYTRVCDLFTASVVLVELAICSPSTLLACPVYL 120
G LL + L +R + P R S V V + ++
Sbjct: 694 WGRELLLKGYRWHIGNGLTIR-INEDPWLPRGAPFALRSKVNVPEGV---------TIHT 753
Query: 121 LL--ACRFAGESLLAGFLGAICLSVGSVDFAYQTIHQTCGSFGPTGKLGQDT------QH 180
LL + + L F V ++ + SF P G+ + H
Sbjct: 754 LLNHDGSWKCDELTGWFHHEDIPWVLGINPNREREDIIGWSFTPNGQYTVASGYKLRFSH 813
Query: 181 FRSVTAIHSPIGSLCTRRSLYRWQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVL 240
+ T P+ S+ ++S W PP G +NT+AS GL ++ RD V+
Sbjct: 814 LQLQTDSTPPLPSM--KKSPVSWSPPPSGTFMINTDASLVVGQPGCGLGMVIRDHLGAVV 873
Query: 241 LAATFYIPHCASVDWAEALAIKEGLALAIDMGVRSFLLETDSLCCFWLL---DRPVDDWK 274
+A T +IP C SV+ AE+LAI+ GL LA + + + +D L + + DW
Sbjct: 874 VAETIFIPGCLSVNMAESLAIRSGLKLADCWSLSNICISSDCQSVSHALNGDNHSITDWG 924
BLAST of Moc11g31620 vs. ExPASy TrEMBL
Match:
A0A803PM23 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 1.8e-10
Identity = 76/274 (27.74%), Postives = 126/274 (45.99%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLGA---------- 60
M FKNLE FNQSLLAKQ W+++ +P SLLARVL+ CY+ + +F+ A++G
Sbjct: 1031 MGFKNLEKFNQSLLAKQGWKIINNPHSLLARVLKACYYTNSNFLEAKIGGYGSFMWRSIL 1090
Query: 61 ---NLLPREGSLQVRSLQRLPIYTRVCDLFTASVVLVELAICSPSTLLACPVYLLLACRF 120
++ + +V+S + + I + L A S T L V+ F
Sbjct: 1091 WGRQIIDKGIRWRVQSGREVRINEDKWLPRPTTFSLRTPAKVSQGTTLDDHVW-----HF 1150
Query: 121 AGESLL---AGFLGAICLSVGSVDFAYQTIHQTCGSFGPTGKLGQDTQHF--RSVTAIHS 180
+ +G+ A+ + + + I +T + ++ ++F R T +
Sbjct: 1151 TPNGIYTVNSGYRVAVTNEL-EAEASTDKITRTWWNKIWNLEIPPKVRNFIWRETTLEVN 1210
Query: 181 PIGSLCTRRSLYRWQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIPH 240
P + RW+PP G +N++AS + GGL L R+ V+ A
Sbjct: 1211 P-------KPEKRWEPPKPGVYCLNSDASVPKNGVNGGLGALIRNHLGEVVAAEIQQQQG 1270
Query: 241 CASVDWAEALAIKEGLALAIDMGVRSFLLETDSL 257
SV+ AE LA++ G+ LAI M ++++TD L
Sbjct: 1271 TYSVEVAEVLALRMGIHLAIKMVAYPYIIQTDCL 1291
BLAST of Moc11g31620 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 3.9e-10
Identity = 93/420 (22.14%), Postives = 145/420 (34.52%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARL------------ 60
M F++LELFN++LLAKQ WR+L P S+L+RVL+G YF+D SFM A++
Sbjct: 646 MGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSIL 705
Query: 61 -----------------------GANLLPREGSLQVRSLQRLPIYTRVCDL-------FT 120
G N +P + +L++ S RLP+ +RV L +
Sbjct: 706 WGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQ 765
Query: 121 ASVVLVELAICSPSTLLACP---------------------------------------- 180
VV E +L+ P
Sbjct: 766 GDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPS 825
Query: 181 ------------------------------------------------------------ 240
Sbjct: 826 SSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGE 885
Query: 241 --VYLLLACRFAGESLLAGFLGAIC---------LSVGSVDFAYQTI-------HQTCGS 251
++L C+FA + G + S+ DF + + +
Sbjct: 886 DSIHLFWICKFAEALWINSKFGKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARA 945
BLAST of Moc11g31620 vs. ExPASy TrEMBL
Match:
A0A803NUL5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 3.9e-10
Identity = 73/263 (27.76%), Postives = 113/263 (42.97%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLGANLLPREGSLQ 60
M F++LE FNQ+LLAKQ W++L+ P LLARVL+ YF + +F A+LG GS
Sbjct: 185 MGFRDLEDFNQALLAKQGWKILQQPDCLLARVLKALYFPNENFFEAKLG-----HFGS-- 244
Query: 61 VRSLQRLPIYTRVCDLFTASVVLVELAICSPSTLLACPVYLLLACRFAGESLLAGFLG-A 120
S+ R ++ R DL + G+ +AGF+G +
Sbjct: 245 --SVWRGILWGR--DLIVKAY---------------------------GKGRVAGFIGFS 304
Query: 121 ICLSVGSVDFAYQTIHQTCGSFGPTG------KLGQDTQHFRSVTAIHSPIGSLCTRRSL 180
+ +F +Q H + +LGQ Q + L +
Sbjct: 305 WLIWQRRNNFVFQQKHPADHLWLSWAVDFIAYQLGQQQQ-----------LPLLVHNKPT 364
Query: 181 YRWQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIPHCASVDWAEALA 240
WQPP + +NT+AS L GL + R+ +++A YI C +V AEA A
Sbjct: 365 VSWQPPPSDFHLINTDASLKLGHLGCGLSAIIRNPAGDLVVAEVKYIQGCMTVPMAEAAA 398
Query: 241 IKEGLALAIDMGVRSFLLETDSL 257
I G+ LA+ + + +D +
Sbjct: 425 IHLGVQLAVRWSINKAWVGSDCI 398
BLAST of Moc11g31620 vs. ExPASy TrEMBL
Match:
A0A6A3B8N2 (RNase H domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110279pilonHSYRG00089 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 5.1e-10
Identity = 78/268 (29.10%), Postives = 119/268 (44.40%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLGANLLPREGSLQ 60
+ ++LE+FNQ+ L KQ WRL +L+A+VL+ Y+ DGSF+TA L ++ S++
Sbjct: 82 LGIRDLEVFNQAFLCKQGWRLFNGSKTLVAQVLKAKYYPDGSFLTADLEVLIIFFYVSMR 141
Query: 61 VRSLQRLPIYTRVCDLFTASVVLVELAICSPSTLLACPVYLLL-ACRFAGESLLA----- 120
LQ + + + F + ELA L C + L+ +C G L+
Sbjct: 142 NERLQMPGTFISI-ECFGHNRPREELA-----KSLFCVLSLVAPSCTRRGGCLVGSSSPR 201
Query: 121 ---GFLGAIC-LSVGSVDF-----AYQTIHQTCGSFGPTGKLGQDTQHFRSVTAIHSPIG 180
G G +C LS+ F + + + GSF G G
Sbjct: 202 VTKGTSGNVCFLSLPGPYFLGCGDPWVCDYLSRGSFFGVGSPG----------------- 261
Query: 181 SLCTRRSLYR-WQPPADGWVKVNTNASFYAASLTGGLDVLTRDSHDIVLLAATFYIPHCA 240
C + R W P G++KVN + S+ TGG+ + RDS L + IPH
Sbjct: 262 --CGSYPIVRLWTIPPAGFIKVNVDGSYDKDLRTGGICCVLRDSTGQFLAGCSSGIPHAM 321
Query: 241 SVDWAEALAIKEGLALAIDMGVRSFLLE 253
E+LA EGL LA+ +G RS ++E
Sbjct: 322 DAFPVESLACLEGLNLALSLGCRSLVVE 324
BLAST of Moc11g31620 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 22/50 (44.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLGA 51
+ FK++E FN +LL KQ WR+L P SL+A+V + YF + A LG+
Sbjct: 56 IGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGS 105
BLAST of Moc11g31620 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 46.2 bits (108), Expect = 4.9e-05
Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 0
Query: 1 MSFKNLELFNQSLLAKQDWRLLRDPTSLLARVLQGCYFRDGSFMTARLG 50
+ F++L FNQ+LLAKQ +R++ P +LL+R+L+ YF S M +G
Sbjct: 57 LGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVG 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_024196130.1 | 5.1e-12 | 26.47 | uncharacterized protein LOC112199331 [Rosa chinensis] | [more] |
XP_022150918.1 | 8.1e-10 | 22.14 | uncharacterized protein LOC111018954 [Momordica charantia] | [more] |
KAE8711725.1 | 1.1e-09 | 29.10 | hypothetical protein F3Y22_tig00110279pilonHSYRG00089 [Hibiscus syriacus] | [more] |
XP_022135942.1 | 1.8e-09 | 44.09 | uncharacterized protein LOC111007775 [Momordica charantia] | [more] |
XP_022140628.1 | 2.4e-09 | 38.32 | uncharacterized protein LOC111011237 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
P93295 | 6.9e-04 | 42.86 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A803P8L6 | 4.6e-11 | 26.73 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PM23 | 1.8e-10 | 27.74 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DAR4 | 3.9e-10 | 22.14 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A803NUL5 | 3.9e-10 | 27.76 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6A3B8N2 | 5.1e-10 | 29.10 | RNase H domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig001... | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 2.2e-05 | 44.00 | Ribonuclease H-like superfamily protein | [more] |
ATMG00310.1 | 4.9e-05 | 42.86 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |