Moc11g31520 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g31520
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr11: 23008057 .. 23015393 (-)
RNA-Seq Expression	Moc11g31520
Synteny	Moc11g31520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTGCGTGTCGTCCTGGAGCGACCATCCCTACGGAGGGTTCAATGGATGGAAATCAAAATCAAGGCAAACTCCAGAAATGGATAGGAGTCACTTAGGTTTTGCTTCAATATTTTCCTTCCCTACGACAGGATTATTGGGGTGGACCTCTGAGGTCCGAAAATGTTGGGTCACACTTACGAGGAGTTGTTAAGTTAGTTAGCAATTTCCTGACCAAATAAACGATGACTAAAATTTATAGGAATAAGAGTTATTCTGGTGTAAAATTTAGTTGAGAATGTCTCAATTCAGTGAAGGAGTACTTGTCCGCCCTACGGTGGCTGTTGCTCTAAATCACTGAAGCATCGTTGCAAAAAAATTTTGTTACGGTGCTTAATTACTTTTGCTAAATTTTGATTGGGTTTAAAAGGCTAATGCATGAAACTAATATAGATTTGCTTTTACTTTCAGCATGTCTACTTCTATTATTGCACTTTTAGCTGCGCAAAGACTTAATGGCGAAAATTACAAACAATGGAAGTCAAACCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTAGTGGTGCGCAATGCCTATGACAGGTGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCTTTAAGTTCATTTACAACTTCCGCATGAAGGAGAGCTCCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTGAGTCGAATGGGGACGTCATAGACGAGCAGAGTCAGGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTTCCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCCTAAACGAGCTGCAGACCTACCAGTCTCTTATGAAATGTAAGGGACAAGAAGGGGAGGCAAATGTTGCCACCTCAAAGAGGTTCAACAGAGGATCGTCCTCTGGAACCAGGTCTGCGCCCTCTTCTTCTGAAATTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGACTCAGTTGCTGCTGCCCAGAAAGGCAAGGTCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAACATGGACGGGCATTGGAAGCGCAACTGCCCAAAGTACTTGGCCGAGAAGACGAAAGCCAACGAAGGTAAATATGATTTACTTGTATTGGAACATGTTTAGTGGAGAATGATGACTCCGTCTGGATACTGGATTCAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAATTCCTGGAGGCAGCTTGACGCTAGAGAGATGACTCTCAACGTCGGAACGGGAGAGGTCGTCTCAACTGTGGCGGTAGGGGAGCTCAAGTTGTTTACAAACAAGAATATGTATATATTATTAGATAATGTGTACGTTGTTCCTAAAATTAAAATGAACTTAATTTCAATTTCTTGTTTGTTGGAACAGATGTATTCAATTTCATTTCATTTAAATGAAGCGTTCATTTTAAGAAATGGTGTTAATATTTGTTCAGCTTTACTTGAAAACAACTTGTATGTGCTAAGACCAACCATAACTAAAGCAGTTTTAAGTACCGAGTTGTTTAAAAATGCTAGAACTCAAAATAAAAGGCAAAAAGTTTCTCAAAAGGAAGATACCTATCTTTGGCACTTAAGATTAGGTCACATTAATCTCAATAGGATTGGGAGGTTGGTTAAGAATGACATTCTAAGTGAGTTAGAAGACGATTCTTTACCACCATGTGTGTCTTGTCTTGAAGGCAAGATGACTAAAAGACCTTTTACTAGAAAATGTTATAGATCCAAAGAGCCCTTAGAACTTATACATTCAGACCTTTGTGGTCCGATGAATGTTAGAGCTCGAGGAGGGTATGAATACTTCATCTCTTTTATCGATGATTATTCAAGTTATGGTTATTTATACCTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAGTACAAGACTGAAGTTGAAAATCAATTAGGTAAAACCATTAAAACACTTCGATCAGATCGGGATAGAGAGTATATGGACTTGAGATTCCAAGACTATATGATAGAACATGGAATCATGTCCCAACTCTCAGCCCCTGGTACACCTCAACAAAACGGTGTATCAGAAAGGAGAAACAGAACCCTGTTGGACATGGTTCAATCAATGATGAGCTATGCTCAGTTGCCTAACTCGTTTTTGGGTTATGCAGTGGAGACTGCAGTTTATATTTTGAACGTAGTTCCATCAAAGAGTGTTTCTGAAACACCCTCTGAGATGTGGAAGGGTCGTAAACCTAGTTTACTTCACTTTCGCATTTGGGGATGCCCGACTCACGTGCTCATGACTAACCCGAAGAAACTGGAACCTCGTTCAAAAGTATGCATATTCGTAGGTTACCCTAAAGAGACGAGAGGTGGTCTTTTCTTCGATCATAAAGAAAACAGAGTGTTTGTATCGACAAATGCTACTTTCTTCGAAGAAGGCCATGTTCGAGATCATAAACCACGGAGTAAGGTAGTAATTAACGAGATTTCCGAAGAAGCTACAAACACGTCAACAAGAGTTGTTGATCAAACTGGCACTACAACAAGAGTTGTTGATGAAGCCAGCACATCGCGTCAGTCTCATCCACCTCAAGTGTTGAGGGTGCCTCGACGTAGTAGGAGGATTGTGTCACAACCTGACCGCTATGTGGGTTTAACTGAAACTCAAGTTGTCATACCTAATGACGGCGTCAAGGATCCATTGACCTACAAAAAGGCAATGGAAGATACTGACAAGGACAAATGGGTCAAAGCAATGGACCTGGAAATGGAGTCGATGTACTTCAATTCCGTTTGGGAACTTGTAGATCAACCTGACGGGATAAAACCCATAGGGTCAAATGGATCTACAAGCGAAAATGAGACGCCGAAGGAATGGTACAGACCTATAAGGCAAGACTTGTGGCAAAAGGCTACACACAAAGGGAAGGGGTGGACTATGAAGAAATCTTCTCCCCTGTAGCTATGCTTAAGTCTATTAGAATACTTCTGTCCATTGCCACATATTATGACTATGAGATATGGCAAATAGACGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAAAGTATTTATATGTCTCAACCCGAAGGGTTCATAGAACAAGGTCAAGAGCAAAAGGTTTGCAAGCTTAAACAGTCCATATATGGACTCAAACAAGCATCTCGATCTTGGAACATAAGGTTTGATACTGCGATCAAATCTTATGGTTTTGACCAAAACGTTGATGAGCCTTGTGTATACACGAAGATCGTCAACAACACCGTAGCCTTCTTATTGGGAATGATGTAGGATACCTACTGACATAAAGAAGTGGCTAGCGACTGAGTTCCAAATGAAAGATTTGGGAGAAGTTCAGTATGTTCTTGGCATCCAAATTCTAAGGGATCGCAAGAACAGAACGTTAGCCCTGTCTCAAGCAACTTATATCGACAAGATGCTTGTTCGATATTCAATGCAGATATCCAAGAAAGGTTTGTTACTCTTCAGGCATGGAATTCATCTGTCTAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATAAAACGTATACCCTATACTTCAGCAGTGGGCAGCCTGATGTACGCTATGTTGTGCATGAGGCCTGACATTTGCTTTGTGGTTGGGATTGGTCAGTAGGTACCAATCCAACCCAGGATATGATCACTAGACTGCTGTTAAAGGAATCCTCAAGTATCTTAGGAGAACGAGGGACTACAAGCTCGTGTATGGCGCTAAGGATTTGATCCTTATAGGATACACTGACTCTGACTTCCAAACAGACAAGGATTCAAGGAAATCCACGTCAGGGTCAGTATTCACTCTTAACGGAGGAGCGGTAGTTTGGCGAAGCATCAAACAAGGATGTATTGCAGACTCCACCATGGAGACTGAATATGTTGCGGCTTGTGAAGCAGCAAAAGAGGCGGTTTGGCTTAGAAAGTTCTTGACAGATTTGGAAGTCATTCCAAACATGAACTTGCCCATCACACTTTATTGTAATAACAGTGGTGTTGTGGCAAATTGTAAAGAACCTCGAAGCCATAAGAGAGGCAAACACATCGAAAGGAAGTACCACCTTATATGGGAGATAGTGCAGCAAGGAGATGTGATTGTCACGAAGATCGTTACAGAGCACAATATTGCTGATCCTTTTACAAAGACACTCACAGCTAAAGTGTTTGAGGGCCATCTAGACAGTCTAGGTTTACGAGCTTTGTACCATTAGTCTAGGGCAAGTGGGAGAAATGTAATTGGGTATAGTGTATGCCCTAGGTTATTGTATTTTCCCTTTGCTTTATGATAATGTACACCCCACTCGAGTTTAGTTCAATTGGGAGTTTGTTGGGTGTGTTGCCCTAAACTCGTAGTTTGTATTTTGTAAAAACAAATGTCTATTTAATAAAGTTTTATTCAATAAATTTGTTGTTGAATCATAGCTTTACATTGTCCAAAATCCAATAAACTAAACATCCAAGGTTATTTTTTATGTAATCGGGACAGTATATATACTGGGTATATAGTTGATATATGGGGTATATATTTGATATACCCCTGATATATGAATAGATAATGTCCCGTGAATAACCTAAAGAGTCTATAGTATATGGATAAGGCTGGGTACCTTATCCTGGCAACACTATGGATACGGCCCACTCTGTAAAGATTACAGACGACTCGATCCAGGTCGTTCGTGTGGAGACATGCGAGTAGGGGTATCCTATACAATGAGTTTGTATAAGACCGGACCACGAAATAGGAAATCTTTAGATGTAATACCGTTAACTAATAGGTTGCTATTTCTTAGGATGACCAGGCAACTCATTCTCAATCCTGAGTGAGTTATGGACTCCTGCCCGTGAGGACTCGTCCTTTGATCTGTATGGGTGAGAGTGGCCCGAGTCGCCGACTCAACATTCCTACCATTTTGGGGACGAGACCGAGTGGAGAGTGGGGAACATAACCTCACAAGATGGAATTCACTCCTCCCCGACTTTAGGGGAGTAGATGAGTGTTCCCTTAAATGCTGACTCCGGGACTTGAACAAGGGGCCCCACCCTCTCATTGGTCGAGAGGGACTTCCAGTTATTGGTTGGACCATAACCGGGTTGTTCATTAGAGGAGCAGTGGTGTTTAAGGAGTAAGATGTAACTCAGGGGTAAAACGGTAATTCGACCCAACTTGAGTTACGAACACTCGTGAAGGATTGACTCGTCATTAATGGTTGTATATCCATGGACACGAAAACATTCTGCAGTGAGAAGAGTGCAACTGCGTGTCTTTAGTGGAATGACCCGTAGTTAACGAATCTAGATTAACTCGGTTAATGAGTTTGACCGATTAATCTTGCATCGTTGGAGCTTCGGATCTGTAGGTCCATTAGGTCCCCTTGCTACCTTATAACGGGTAAAACGAGGATCAAGTTTTTGGAAGAATTTGAATTGTTCAAATTACTTAAGGGAATATATGTATATTGATACTTTATAATATATAGTTAATTGTTAATTAAAACTATATATTATGAGAGATATTATTTGAATGAGATTTAAATAAAATTAATATGAACAAGATTCATATTAAAACTATAGGTTAAAAATAATGTGCATAAGATGTACATTAAAACTATAGGTTATACGAGAGAAATGTTTTAGAATATGATTCTAATTTTAAAAATAATTAAGTATTAATTATTTATGTATATATATATATTTATTAATTATTAATTAGATTAATAATTAATTATATTAATTAATTTGATTAATTAATTATATATATATATATTAATTATTATATATATATTTTAATTATTATTATATATTATAAATATATATATATATATTAATATTATTATTAATATTAACTCCCCTGCAATATTGCAGGGGAGTGGGGGAGTTATGTGACGTGGGGTAACTCCTCATGTCACTGTTTTTTCTGCAAAACCCAGGAAAGGTTACAGAAAACAGAGATGTTACAGAACTCCCAAGCTTCTCTCTCGTGCAATCTCTCTATCAAACTTTCCCTCTCGTTCCAAAGAATGTCTCCCACAAGAACGATCTCGTACCTAGAGGATAGCGAGGAAGGCTCGGTGGTGGTGTTCGTCGGAATTTTATTGAAGAAACGTTCTTCAAAGGTATTGAATTTTCTCTGTATTTTCCTTCTTTGAAATCCGATTTTGTATCCCAAAAAACAACAACGAAGATCCGCTTCCGCTCCGGGATTCACATCCCTTCAAGGACAACCCTGCCAAGGCTCAATTCTGACTAGACCAACAGTAACTGACTCTCATCTGCGCAGTCCTACCCAAGCTCCGTCTGTGATTGCTTCAAGACTGAGCAATCCTACGTGGTCTTTGTCTCCCAGACACTAGAGACACAACCACGTCCTCCCACAATGAAATCAGAAGGAAAATTTCCCCTCTGATGACTTGACACTCTCACCCAAGTCTGTTGCCACTCCAGAGACATGACTCTTGACTTTAGCACTCACTGTAGTCTTCTCCCTCGATGCACTCCTTCACCTACGCAACTTCATCTGCTCGCCAAACCGCCTAACAACTAGGGCTAGAAACCGACAATCTGTTGAGCACCTCACTGAGTTGTTCCCCTTTTCCTTTTCTCTACTTCCCAGCTATTGTACTTGAACTTATGGTAGATTTTCATATTCTGTCTTAGTTTTCAATGTTGTTGATTCCTCCAAGTCTTGGCCCGAACCATCGGTAGCCCTGTGCATCATCTGTCTCTGTAACTCCCTAGCAACCTCAAATCTAAACACATACACTGAAGCTTCTTTGTCGCCCACTGCCACTACCTTGGTTCCCCTCACTAGCTTTCAGCTACCATATGCAAACTCACTATCGTAACGCTCTTCATCCAGCTTCCCAGTAAATATCATATTCCTCATGAAAGTGGGCATAATGCCCCTAACTTGGAGAGTTTGTTGTTTCCCATTCACTCCATACCAAGGTTCCATGTAGTGAAAGATGTAAACAACTGTCTGTCTAAAGTGATGTGTACTGAGGCTGCATTGTCGACTACCCACTCTGATGTCTGCTCTATAAATGTTGTGCTAATCTCAACGCTAGCTAGCAACACCTCAGCTGTCAAGTAG

mRNA sequence

ATGACCTGCGTGTCGTCCTGGAGCGACCATCCCTACGGAGGGTTCAATGGATGGAAATCAAAATCAAGGCAAACTCCAGAAATGGATAGGAGTCACTTAGTGAAGGAGTACTTGTCCGCCCTACGCATGTCTACTTCTATTATTGCACTTTTAGCTGCGCAAAGACTTAATGGCGAAAATTACAAACAATGGAAGTCAAACCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTAGTGGTGCGCAATGCCTATGACAGGTGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCTTTAAGTTCATTTACAACTTCCGCATGAAGGAGAGCTCCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTGAGTCGAATGGGGACGTCATAGACGAGCAGAGTCAGGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTTCCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCCTAAACGAGCTGCAGACCTACCAGTCTCTTATGAAATGTAAGGGACAAGAAGGGGAGGCAAATGTTGCCACCTCAAAGAGGTTCAACAGAGGATCGTCCTCTGGAACCAGGTCTGCGCCCTCTTCTTCTGAAATTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGACTCAGTTGCTGCTGCCCAGAAAGGCAAGGTCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAACATGGACGGGCATTGGAAGCGCAACTGCCCAAAGTACTTGGCCGAGAAGACGAAAGCCAACGAAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAATTCCTGGAGGCAGCTTGACGCTAGAGAGATGACTCTCAACGTCGGAACGGGAGAGGTCGTCTCAACTGTGGCGGAAAGGTTACAGAAAACAGAGATGTTACAGAACTCCCAAGCTTCTCTCTCGTGCAATCTCTCTATCAAACTTTCCCTCTCGTTCCAAAGAATGTCTCCCACAAGAACGATCTCGTACCTAGAGGATAGCGAGGAAGGCTCGGTGGTGGTGTTCGTCGGAATTTTATTGAAGAAACGTTCTTCAAAGCTTCCCAGTAAATATCATATTCCTCATGAAAGTGGGCATAATGCCCCTAACTTGGAGAGTTTGTTGTTTCCCATTCACTCCATACCAAGGTTCCATGTAGTGAAAGATGTAAACAACTGTCTGTCTAAAGTGATGTGTACTGAGGCTGCATTGTCGACTACCCACTCTGATGTCTGCTCTATAAATGTTGTGCTAATCTCAACGCTAGCTAGCAACACCTCAGCTGTCAAGTAG

Coding sequence (CDS)

ATGACCTGCGTGTCGTCCTGGAGCGACCATCCCTACGGAGGGTTCAATGGATGGAAATCAAAATCAAGGCAAACTCCAGAAATGGATAGGAGTCACTTAGTGAAGGAGTACTTGTCCGCCCTACGCATGTCTACTTCTATTATTGCACTTTTAGCTGCGCAAAGACTTAATGGCGAAAATTACAAACAATGGAAGTCAAACCTAAACACTATTCTCGTGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGCTCCTGCGCCTAACGCCACTGTAGTGGTGCGCAATGCCTATGACAGGTGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCCAAGAAGCACGAGGACACGGTCACCGCTAAGGAGATCATGGACTCGCTGCAGAGCATGTTTGGACAACCGTCCTCACAGGCTCGACATGAAGCCTTTAAGTTCATTTACAACTTCCGCATGAAGGAGAGCTCCTCAGTGCGAGAACACGTTCTCAACCTGATGGTCCACTTCAACGTGGCTGAGTCGAATGGGGACGTCATAGACGAGCAGAGTCAGGTCAGCTTTATTCTGGAATCTCTTCCGAAGAGTTTCCTTCCATTCCGCAGCAATGCGGTTATGAATAAGCTGGAGTACACTCTTACCACGCTCCTAAACGAGCTGCAGACCTACCAGTCTCTTATGAAATGTAAGGGACAAGAAGGGGAGGCAAATGTTGCCACCTCAAAGAGGTTCAACAGAGGATCGTCCTCTGGAACCAGGTCTGCGCCCTCTTCTTCTGAAATTAAGACTTTTAAGAAGAAGAAGGCTGCTGGTAAGGGGTCTAAACCTGACTCAGTTGCTGCTGCCCAGAAAGGCAAGGTCAAGGTTGCAGAGAAAGGAAAGTGTTTCCACTGCAACATGGACGGGCATTGGAAGCGCAACTGCCCAAAGTACTTGGCCGAGAAGACGAAAGCCAACGAAGGAGCCACTAATCACGTTTGTTCTTCATTTCAGGGAATTAATTCCTGGAGGCAGCTTGACGCTAGAGAGATGACTCTCAACGTCGGAACGGGAGAGGTCGTCTCAACTGTGGCGGAAAGGTTACAGAAAACAGAGATGTTACAGAACTCCCAAGCTTCTCTCTCGTGCAATCTCTCTATCAAACTTTCCCTCTCGTTCCAAAGAATGTCTCCCACAAGAACGATCTCGTACCTAGAGGATAGCGAGGAAGGCTCGGTGGTGGTGTTCGTCGGAATTTTATTGAAGAAACGTTCTTCAAAGCTTCCCAGTAAATATCATATTCCTCATGAAAGTGGGCATAATGCCCCTAACTTGGAGAGTTTGTTGTTTCCCATTCACTCCATACCAAGGTTCCATGTAGTGAAAGATGTAAACAACTGTCTGTCTAAAGTGATGTGTACTGAGGCTGCATTGTCGACTACCCACTCTGATGTCTGCTCTATAAATGTTGTGCTAATCTCAACGCTAGCTAGCAACACCTCAGCTGTCAAGTAG

Protein sequence

MTCVSSWSDHPYGGFNGWKSKSRQTPEMDRSHLVKEYLSALRMSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYDRWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNFRMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEYTLTTLLNELQTYQSLMKCKGQEGEANVATSKRFNRGSSSGTRSAPSSSEIKTFKKKKAAGKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANEGATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVAERLQKTEMLQNSQASLSCNLSIKLSLSFQRMSPTRTISYLEDSEEGSVVVFVGILLKKRSSKLPSKYHIPHESGHNAPNLESLLFPIHSIPRFHVVKDVNNCLSKVMCTEAALSTTHSDVCSINVVLISTLASNTSAVK

Homology

[Close]

BLAST of Moc11g31520 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 429.1 bits (1102), Expect = 5.3e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKTKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

[Close]

BLAST of Moc11g31520 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 235/395 (59.49%), Postives = 283/395 (71.65%), Query Frame = 0


Query: 43  MSTSIIALLAAQRLNGENYKQWKSNLNTILVIDDLRFVLQEDCPQAPAPNATVVVRNAYD 102
           M+++ + +LAA +LNG NY  WK+ +NT+L+IDDLRFVL E+CPQ PA NAT  VR  Y+
Sbjct: 1   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 103 RWIKANDKAKVYILASISDVLAKKHEDTVTAKEIMDSLQSMFGQPSSQARHEAFKFIYNF 162
           RW KAN+KA+ YILAS+S+VLAKKHE  +TA+EIMDSLQ MFGQ S Q +H+A K+IYN 
Sbjct: 61  RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 163 RMKESSSVREHVLNLMVHFNVAESNGDVIDEQSQVSFILESLPKSFLPFRSNAVMNKLEY 222
           RM E +SVREHVLN+MVHFNVAE NG VIDE SQVSFILESLP+SFL FRSNAVMNK+ Y
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 223 TLTTLLNELQTYQSLMKCKGQEGEANVATS-KRFNRGSSSGTRSAPSSSEIKTFKKKKAA 282
           TLTTLLNELQT++SLMK KGQ+GEANVATS ++F+RGS+SGT+S PSSS  K +KKKK  
Sbjct: 181 TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKK-G 240

Query: 283 GKGSKPDSVAAAQKGKVKVAEKGKCFHCNMDGHWKRNCPKYLAEKTKANE---------- 342
           G+G+K +  AA    K K A KG CFHCN +GHWKRNCPKYLAEK KA +          
Sbjct: 241 GQGNKANLAAAKTTKKAKAA-KGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLET 300

Query: 343 --------------GATNHVCSSFQGINSWRQLDAREMTLNVGTGEVVSTVA-------- 398
                         GATNHVCSSFQGI+SWRQL+  EMT+ VGTG VVS +A        
Sbjct: 301 CLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCL 360

The following BLAST results are available for this feature:

BLAST of Moc11g31520 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14550.1	5.3e-116	59.49	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	5.3e-116	59.49	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	5.3e-116	59.49	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0047792.1	5.3e-116	59.49	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0031826.1	5.3e-116	59.49	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]

BLAST of Moc11g31520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g31520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	2.6e-116	59.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	2.6e-116	59.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TWB9	2.6e-116	59.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	2.6e-116	59.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]
A0A5A7UGV2	2.6e-116	59.49	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]

BLAST of Moc11g31520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	4.10.60.10		coord: 274..333 e-value: 8.5E-7 score: 30.7
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 104..234 e-value: 1.3E-18 score: 67.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..294
None	No IPR available	PANTHER	PTHR35317:SF16	ZINC FINGER, CCHC-TYPE-RELATED	coord: 49..325
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 49..325
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 305..321 score: 9.520856
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 301..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g31520.1	Moc11g31520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding