Moc11g31480 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g31480
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 22990910 .. 22991482 (+)
RNA-Seq Expression	Moc11g31480
Synteny	Moc11g31480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAACCAGTAAACTCAACCAACACAGCGGACCGAAGAGCTCTGGCTGCTAACGATAGCCACCAGAGAGAGGTCGGGGTAGAAGTGGCAGAGGGCCAGATTCAGGAAGGCCTAGGGACTGAGCCGCTCCGTAGGTCGGCACGCATCACCATGCCTGTTCTACCGCCGGCACATCCAAAACCGTCTAAGGCCAATCGTGACCGAGGTGGTGCCTCGAGAAGAACCACTCGAGGAGCAGCTCTAGCTCTTAATAGGGAGAACTTTGATGCACTCCAGAAAGAAATGGAGACAATGCGCACCCAAATGCGCACCATGGAAGAGATGTACAATGAAATGGTGCAAGCTGTTGGTGCCGGGTCTCGATCTGAAAACCGAGCGGTGCGCGACGAGGTGCGTGAGCAAGGAGGTCTTCACCTCAACCCAGTCGATGAAAAGCACCCCAGAGGTGATGAAGATGAGGAGTACACTCGCCAGAGAGGCGATCTCCGTGACCATCTCAACAGAAAGAGAAGCTCGTCCCTCCGAAGAGGAGGAACTCCAGCATGCTCGCACAAGAACTCCAACCAGTAA

mRNA sequence

ATGGTTCAACCAGTAAACTCAACCAACACAGCGGACCGAAGAGCTCTGGCTGCTAACGATAGCCACCAGAGAGAGGTCGGGGTAGAAGTGGCAGAGGGCCAGATTCAGGAAGGCCTAGGGACTGAGCCGCTCCGTAGGTCGGCACGCATCACCATGCCTGTTCTACCGCCGGCACATCCAAAACCGTCTAAGGCCAATCGTGACCGAGGTGGTGCCTCGAGAAGAACCACTCGAGGAGCAGCTCTAGCTCTTAATAGGGAGAACTTTGATGCACTCCAGAAAGAAATGGAGACAATGCGCACCCAAATGCGCACCATGGAAGAGATGTACAATGAAATGGTGCAAGCTGTTGGTGCCGGGTCTCGATCTGAAAACCGAGCGGTGCGCGACGAGGTGCGTGAGCAAGGAGGTCTTCACCTCAACCCAGTCGATGAAAAGCACCCCAGAGGTGATGAAGATGAGGAGTACACTCGCCAGAGAGGCGATCTCCGTGACCATCTCAACAGAAAGAGAAGCTCGTCCCTCCGAAGAGGAGGAACTCCAGCATGCTCGCACAAGAACTCCAACCAGTAA

Coding sequence (CDS)

ATGGTTCAACCAGTAAACTCAACCAACACAGCGGACCGAAGAGCTCTGGCTGCTAACGATAGCCACCAGAGAGAGGTCGGGGTAGAAGTGGCAGAGGGCCAGATTCAGGAAGGCCTAGGGACTGAGCCGCTCCGTAGGTCGGCACGCATCACCATGCCTGTTCTACCGCCGGCACATCCAAAACCGTCTAAGGCCAATCGTGACCGAGGTGGTGCCTCGAGAAGAACCACTCGAGGAGCAGCTCTAGCTCTTAATAGGGAGAACTTTGATGCACTCCAGAAAGAAATGGAGACAATGCGCACCCAAATGCGCACCATGGAAGAGATGTACAATGAAATGGTGCAAGCTGTTGGTGCCGGGTCTCGATCTGAAAACCGAGCGGTGCGCGACGAGGTGCGTGAGCAAGGAGGTCTTCACCTCAACCCAGTCGATGAAAAGCACCCCAGAGGTGATGAAGATGAGGAGTACACTCGCCAGAGAGGCGATCTCCGTGACCATCTCAACAGAAAGAGAAGCTCGTCCCTCCGAAGAGGAGGAACTCCAGCATGCTCGCACAAGAACTCCAACCAGTAA

Protein sequence

MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHPKPSKANRDRGGASRRTTRGAALALNRENFDALQKEMETMRTQMRTMEEMYNEMVQAVGAGSRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEEYTRQRGDLRDHLNRKRSSSLRRGGTPACSHKNSNQ

Homology

[Close]

BLAST of Moc11g31480 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 237.7 bits (605), Expect = 8.5e-59
Identity = 135/190 (71.05%), Postives = 142/190 (74.74%), Query Frame = 0


Query: 1   MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHP 60
           MVQPV+STNT DRRAL AND HQREVG EV EGQI EGLGTEP  RSARIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  KPSKANRDRGGASRRTTRGAALALNRENFDALQKEMETMRTQMRTMEEMYNEMVQAVGAG 120
           KP KANR RGGASRRTT GAA A +RENFDALQKEME MRTQM TMEEMYNEMVQAVGAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEEYTRQRGDLRDHLNRKRSSSLRRGGT 180
           SRSE+RA RDE                            RGDLRDHL+RKRSSSLR+G +
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 162

Query: 181 PACSHKNSNQ 191
           P+CSHKNSNQ
Sbjct: 181 PSCSHKNSNQ 162

[Close]

BLAST of Moc11g31480 vs. NCBI nr
Match: XP_022151719.1 (uncharacterized protein LOC111019634 [Momordica charantia])

HSP 1 Score: 129.0 bits (323), Expect = 4.3e-26
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 99  MRTQMRTMEEMYNEMVQAVGAGSRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEEYTR 158
           MRTQM TME+MY+EMVQA GA SRSENR  R+++ EQ G HL PV + HP G EDEEYT 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 QRGDLRDHLNRKRSSSLRRGGTPACSHKNSNQ 191
           QRGDLR+HLNRKRSSSLR+G +P+CSH+NSNQ
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQ 92

[Close]

BLAST of Moc11g31480 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-19
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 1   MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHP 60
           MVQP NSTNTADRRALAAN  HQREVG EV EGQ  E LGTEPL RSARIT PVLPPAHP
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61  KPSKANRDRGGASRRTTRGAALALNRENFDALQK----EMETMRTQMRTMEEMYNE 113
           KPSKA      +    T G    + RE FD L+     ++E ++ +    E  +++
Sbjct: 61  KPSKAE----SSYNPITPG---VITREEFDQLKSKFDAQVEALKARCEKKESSFDD 109

[Close]

BLAST of Moc11g31480 vs. NCBI nr
Match: XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-15
Identity = 56/95 (58.95%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 96  METMRTQMRTMEEMYNEMVQAVGAGSRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEE 155
           ME MRTQMRTMEEMYN+MVQ  GA SRS ++ V ++V EQG LH +PVDE+H        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEH-------- 60

Query: 156 YTRQRGDLRDHLNRKRSSSLRRGGTPACSHKNSNQ 191
                GDLRDHLNRKR+SS R   T    HKNSNQ
Sbjct: 61  ---LGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQ 84

[Close]

BLAST of Moc11g31480 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-09
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 1  MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHP 60
          MVQP+ S NTA+RRAL  N+  Q E+  +V E Q + G   +P RRS R    +LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 KPSKANRDRGGAS 74
          +  KANR RGG +
Sbjct: 61 RSGKANRGRGGGT 73

[Close]

BLAST of Moc11g31480 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 4.1e-59
Identity = 135/190 (71.05%), Postives = 142/190 (74.74%), Query Frame = 0


Query: 1   MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHP 60
           MVQPV+STNT DRRAL AND HQREVG EV EGQI EGLGTEP  RSARIT P L PAHP
Sbjct: 1   MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61  KPSKANRDRGGASRRTTRGAALALNRENFDALQKEMETMRTQMRTMEEMYNEMVQAVGAG 120
           KP KANR RGGASRRTT GAA A +RENFDALQKEME MRTQM TMEEMYNEMVQAVGAG
Sbjct: 61  KPFKANRGRGGASRRTTLGAAPAPSRENFDALQKEMEAMRTQMLTMEEMYNEMVQAVGAG 120

Query: 121 SRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEEYTRQRGDLRDHLNRKRSSSLRRGGT 180
           SRSE+RA RDE                            RGDLRDHL+RKRSSSLR+G +
Sbjct: 121 SRSEDRAARDE----------------------------RGDLRDHLSRKRSSSLRKGRS 162

Query: 181 PACSHKNSNQ 191
           P+CSHKNSNQ
Sbjct: 181 PSCSHKNSNQ 162

[Close]

BLAST of Moc11g31480 vs. ExPASy TrEMBL
Match: A0A6J1DDW5 (uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019634 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-26
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 99  MRTQMRTMEEMYNEMVQAVGAGSRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEEYTR 158
           MRTQM TME+MY+EMVQA GA SRSENR  R+++ EQ G HL PV + HP G EDEEYT 
Sbjct: 1   MRTQMCTMEKMYSEMVQAAGARSRSENRVARNDMHEQRGHHLGPVKKGHPEGGEDEEYTH 60

Query: 159 QRGDLRDHLNRKRSSSLRRGGTPACSHKNSNQ 191
           QRGDLR+HLNRKRSSSLR+G +P+CSH+NSNQ
Sbjct: 61  QRGDLREHLNRKRSSSLRKGQSPSCSHRNSNQ 92

[Close]

BLAST of Moc11g31480 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-19
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 1   MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHP 60
           MVQP NSTNTADRRALAAN  HQREVG EV EGQ  E LGTEPL RSARIT PVLPPAHP
Sbjct: 1   MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61  KPSKANRDRGGASRRTTRGAALALNRENFDALQK----EMETMRTQMRTMEEMYNE 113
           KPSKA      +    T G    + RE FD L+     ++E ++ +    E  +++
Sbjct: 61  KPSKAE----SSYNPITPG---VITREEFDQLKSKFDAQVEALKARCEKKESSFDD 109

[Close]

BLAST of Moc11g31480 vs. ExPASy TrEMBL
Match: A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 9.6e-16
Identity = 56/95 (58.95%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 96  METMRTQMRTMEEMYNEMVQAVGAGSRSENRAVRDEVREQGGLHLNPVDEKHPRGDEDEE 155
           ME MRTQMRTMEEMYN+MVQ  GA SRS ++ V ++V EQG LH +PVDE+H        
Sbjct: 1   MEAMRTQMRTMEEMYNKMVQIAGARSRSGDQVVHEDVHEQGDLHCDPVDEEH-------- 60

Query: 156 YTRQRGDLRDHLNRKRSSSLRRGGTPACSHKNSNQ 191
                GDLRDHLNRKR+SS R   T    HKNSNQ
Sbjct: 61  ---LGGDLRDHLNRKRNSSHRGERTSTYWHKNSNQ 84

[Close]

BLAST of Moc11g31480 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 1  MVQPVNSTNTADRRALAANDSHQREVGVEVAEGQIQEGLGTEPLRRSARITMPVLPPAHP 60
          MVQP+ S NTA+RRAL  N+  Q E+  +V E Q + G   +P RRS R    +LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 KPSKANRDRGGAS 74
          +  KANR RGG +
Sbjct: 61 RSGKANRGRGGGT 73

The following BLAST results are available for this feature:

BLAST of Moc11g31480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159327.1	8.5e-59	71.05	uncharacterized protein LOC111025738 [Momordica charantia]	[more]
XP_022151719.1	4.3e-26	71.74	uncharacterized protein LOC111019634 [Momordica charantia]	[more]
XP_022152854.1	3.9e-19	55.17	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022156088.1	2.0e-15	58.95	uncharacterized protein LOC111023060 [Momordica charantia]	[more]
XP_022156638.1	2.8e-09	50.68	uncharacterized protein LOC111023488 [Momordica charantia]	[more]

BLAST of Moc11g31480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g31480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZJ1	4.1e-59	71.05	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDW5	2.1e-26	71.74	uncharacterized protein LOC111019634 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DHB3	1.9e-19	55.17	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DPN4	9.6e-16	58.95	uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DR60	1.3e-09	50.68	uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Moc11g31480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g31480.1	Moc11g31480.1	mRNA