Moc11g30970 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g30970
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 22653334 .. 22654030 (+)
RNA-Seq Expression	Moc11g30970
Synteny	Moc11g30970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGATCCAAGAAGTTTCTCCATACCGATATTTATAAGAGGACAGAAAATCAGGCAAGCACTTTGTGATCTTGGTGCAAGCATTAACTTGATGCCCTTGTCTGTTTACAAGAAGCTGGGAACGGGTGAAGCAAGACTCACTACGGTGACGCTCCAACTAGCAGATCGCTCTATTACGTATCATGAAGGGAAAATCGAAGATGTGCTGGTACAAGTGAACAAATTTATATTCCCCGCTGACTTTATTATCCTTGATTATGATACATATTAGGAAGTCTCAATCATTTTGGGAAGATCATTTCTAGCAATTGGAAGGGCATTGGTGGATGTACACAAGGGAAAGCTAACAATGCGAGTACCCAAGATCAAGAAGTGAAGTTTTCTATCTACGATTCCATGAAGTATTCGGCAGAATCTGCGGATGTTCAGTCTTACAGATTGTGGAAGAATCATTTTTAGAGGATTTTAGTCAGGAGATGATGCTGGAGCATAGTGCAAATAGAGATGCTAGAGCTCAAGACGATTTTAGTGATAGGAATAAAGAGATGATAGTAAAAAAAGATGCTGCCACTGAAATAGAAACTCCAGCACCAGTAGAACAGTATAAAAATGTTGAGGCCTTAGCGCAACATGCAGAAGCTAATGAGGGCCAACCAAGTGGAGAGAGGGTAGATGTGTTGGGTTTTGTGCCCTAA

mRNA sequence

ATGAAGGATCCAAGAAGTTTCTCCATACCGATATTTATAAGAGGACAGAAAATCAGGCAAGCACTTTGTGATCTTGGTGCAAGCATTAACTTGATGCCCTTGTCTGTTTACAAGAAGCTGGGAACGGGTGAAGCAAGACTCACTACGGTGACGCTCCAACTAGCAGATCGCTCTATTACGTATCATGAAGGGAAAATCGAAGATGTGCTGGAAGTCTCAATCATTTTGGGAAGATCATTTCTAGCAATTGGAAGGGCATTGGTGGATGTACACAAGGGAAAGCTAACAATGCGAATTGTGGAAGAATCATTTTTAGAGGATTTTAGTCAGGAGATGATGCTGGAGCATAGTGCAAATAGAGATGCTAGAGCTCAAGACGATTTTAGTGATAGGAATAAAGAGATGATAGTAAAAAAAGATGCTGCCACTGAAATAGAAACTCCAGCACCAGTAGAACAGTATAAAAATGTTGAGGCCTTAGCGCAACATGCAGAAGCTAATGAGGGCCAACCAAGTGGAGAGAGGGTAGATGTGTTGGGTTTTGTGCCCTAA

Coding sequence (CDS)

ATGAAGGATCCAAGAAGTTTCTCCATACCGATATTTATAAGAGGACAGAAAATCAGGCAAGCACTTTGTGATCTTGGTGCAAGCATTAACTTGATGCCCTTGTCTGTTTACAAGAAGCTGGGAACGGGTGAAGCAAGACTCACTACGGTGACGCTCCAACTAGCAGATCGCTCTATTACGTATCATGAAGGGAAAATCGAAGATGTGCTGGAAGTCTCAATCATTTTGGGAAGATCATTTCTAGCAATTGGAAGGGCATTGGTGGATGTACACAAGGGAAAGCTAACAATGCGAATTGTGGAAGAATCATTTTTAGAGGATTTTAGTCAGGAGATGATGCTGGAGCATAGTGCAAATAGAGATGCTAGAGCTCAAGACGATTTTAGTGATAGGAATAAAGAGATGATAGTAAAAAAAGATGCTGCCACTGAAATAGAAACTCCAGCACCAGTAGAACAGTATAAAAATGTTGAGGCCTTAGCGCAACATGCAGAAGCTAATGAGGGCCAACCAAGTGGAGAGAGGGTAGATGTGTTGGGTTTTGTGCCCTAA

Protein sequence

MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSITYHEGKIEDVLEVSIILGRSFLAIGRALVDVHKGKLTMRIVEESFLEDFSQEMMLEHSANRDARAQDDFSDRNKEMIVKKDAATEIETPAPVEQYKNVEALAQHAEANEGQPSGERVDVLGFVP

Homology

[Close]

BLAST of Moc11g30970 vs. NCBI nr
Match: XP_022158748.1 (uncharacterized protein LOC111025212 [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 5.5e-31
Identity = 93/180 (51.67%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDPRSF+IPI I GQKI  A CDLGASINLMPLS+  KLG GEAR T VTLQLADR IT
Sbjct: 42  MKDPRSFTIPISIGGQKIGLAFCDLGASINLMPLSINNKLGIGEARPTIVTLQLADRFIT 101

Query: 61  YHEGKIEDVLEVSIILGRSFLAIGRALVDVHKGKLTMRIVEESFLEDFSQEMMLEHSANR 120
           + EGK EDVL                            +  + F+   +  ++L++  ++
Sbjct: 102 HLEGKFEDVL----------------------------VQVDKFISP-ADFIILDYDVDK 161

Query: 121 DARAQDDFSDRNKEMIVKKDAATEIETPAPVEQYKNVE---ALAQHAEANEGQPSGERVD 178
           +       SD NKEM+ K+DA TEIETPAP E+YKNVE   A AQHAEA++ QPSGE VD
Sbjct: 162 EVPIILG-SDGNKEMMAKEDAITEIETPAPGEEYKNVELSHAPAQHAEASKSQPSGEMVD 191

[Close]

BLAST of Moc11g30970 vs. NCBI nr
Match: XP_022155367.1 (uncharacterized protein LOC111022509 [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29
Identity = 89/183 (48.63%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDPRSF+IP+ I  QKI Q LCDL ASINLMPLS+YKKLG GEA  T VTLQLADRSIT
Sbjct: 17  MKDPRSFTIPVSIGEQKIGQTLCDLRASINLMPLSIYKKLGMGEAPPTXVTLQLADRSIT 76

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTM-- 120
           Y EGKIE+VL                     EV II G+ F A  +ALVDV KG+L M  
Sbjct: 77  YLEGKIENVLXQVDKFIFPADFIILDYDADKEVPIIFGKPFFATEKALVDVKKGELKMHV 136

Query: 121 -------------------------RIVEESFLEDFSQEMMLEHSANRDARAQDDFSDRN 136
                                    +I+ E+ +E  S   +LEHS +RDA AQ+ F + N
Sbjct: 137 QDQKVKFSVYDSRKFPIGTEECSLLKILGEALMEKLSANAILEHSVSRDAEAQEYFGEWN 196

[Close]

BLAST of Moc11g30970 vs. NCBI nr
Match: XP_022158600.1 (uncharacterized protein LOC111025057 [Momordica charantia])

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-29
Identity = 77/123 (62.60%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDP SF+IP+ I GQKI  ALCDLGASINLMPL +Y KLG GEAR TTVTLQL DRS T
Sbjct: 17  MKDPESFTIPVSIGGQKIGLALCDLGASINLMPLLIYNKLGIGEARPTTVTLQLTDRSST 76

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTMRI 103
           Y EGKIED L                     +VSIILGRSFLA G+ALVDVHKG+LT+R+
Sbjct: 77  YLEGKIEDFLVQVDKFIFPADFIILDYDADKKVSIILGRSFLATGKALVDVHKGELTIRV 136

[Close]

BLAST of Moc11g30970 vs. NCBI nr
Match: XP_022148334.1 (uncharacterized protein LOC111017014 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-29
Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDPRSF+IPI I GQKI  ALCDLGASINL+PLS+Y KLG GEAR TTVTLQLAD+S+T
Sbjct: 131 MKDPRSFTIPISIGGQKIGLALCDLGASINLIPLSIYNKLGIGEARPTTVTLQLADQSLT 190

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTMRI 103
           + EGKIEDVL                     EV II+ R FLA  RALV+VHKGKLTMR+
Sbjct: 191 HPEGKIEDVLVQVDKFIFPIDFIILDYDADKEVHIIIRRPFLATERALVNVHKGKLTMRV 250

[Close]

BLAST of Moc11g30970 vs. NCBI nr
Match: XP_022155972.1 (uncharacterized protein LOC111022956 [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-29
Identity = 76/123 (61.79%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKD  SF+IP+ I GQKI QALCDLGASI LM LSVYKKLG G+AR+TT+T+QLADRSIT
Sbjct: 42  MKDLGSFTIPVAITGQKIGQALCDLGASIKLMSLSVYKKLGMGKARITTITIQLADRSIT 101

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTMRI 103
           + EGKIEDVL                     EV IILGRSFL  GR LVDVHKG++TMR+
Sbjct: 102 HPEGKIEDVLVQVDKFIFPADFIILDYDANKEVPIILGRSFLDTGRTLVDVHKGEVTMRV 161

[Close]

BLAST of Moc11g30970 vs. ExPASy TrEMBL
Match: A0A6J1DWZ3 (uncharacterized protein LOC111025212 OS=Momordica charantia OX=3673 GN=LOC111025212 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31
Identity = 93/180 (51.67%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDPRSF+IPI I GQKI  A CDLGASINLMPLS+  KLG GEAR T VTLQLADR IT
Sbjct: 42  MKDPRSFTIPISIGGQKIGLAFCDLGASINLMPLSINNKLGIGEARPTIVTLQLADRFIT 101

Query: 61  YHEGKIEDVLEVSIILGRSFLAIGRALVDVHKGKLTMRIVEESFLEDFSQEMMLEHSANR 120
           + EGK EDVL                            +  + F+   +  ++L++  ++
Sbjct: 102 HLEGKFEDVL----------------------------VQVDKFISP-ADFIILDYDVDK 161

Query: 121 DARAQDDFSDRNKEMIVKKDAATEIETPAPVEQYKNVE---ALAQHAEANEGQPSGERVD 178
           +       SD NKEM+ K+DA TEIETPAP E+YKNVE   A AQHAEA++ QPSGE VD
Sbjct: 162 EVPIILG-SDGNKEMMAKEDAITEIETPAPGEEYKNVELSHAPAQHAEASKSQPSGEMVD 191

[Close]

BLAST of Moc11g30970 vs. ExPASy TrEMBL
Match: A0A6J1DP51 (uncharacterized protein LOC111022509 OS=Momordica charantia OX=3673 GN=LOC111022509 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.0e-30
Identity = 89/183 (48.63%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDPRSF+IP+ I  QKI Q LCDL ASINLMPLS+YKKLG GEA  T VTLQLADRSIT
Sbjct: 17  MKDPRSFTIPVSIGEQKIGQTLCDLRASINLMPLSIYKKLGMGEAPPTXVTLQLADRSIT 76

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTM-- 120
           Y EGKIE+VL                     EV II G+ F A  +ALVDV KG+L M  
Sbjct: 77  YLEGKIENVLXQVDKFIFPADFIILDYDADKEVPIIFGKPFFATEKALVDVKKGELKMHV 136

Query: 121 -------------------------RIVEESFLEDFSQEMMLEHSANRDARAQDDFSDRN 136
                                    +I+ E+ +E  S   +LEHS +RDA AQ+ F + N
Sbjct: 137 QDQKVKFSVYDSRKFPIGTEECSLLKILGEALMEKLSANAILEHSVSRDAEAQEYFGEWN 196

[Close]

BLAST of Moc11g30970 vs. ExPASy TrEMBL
Match: A0A6J1DWA2 (uncharacterized protein LOC111025057 OS=Momordica charantia OX=3673 GN=LOC111025057 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 6.6e-30
Identity = 77/123 (62.60%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDP SF+IP+ I GQKI  ALCDLGASINLMPL +Y KLG GEAR TTVTLQL DRS T
Sbjct: 17  MKDPESFTIPVSIGGQKIGLALCDLGASINLMPLLIYNKLGIGEARPTTVTLQLTDRSST 76

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTMRI 103
           Y EGKIED L                     +VSIILGRSFLA G+ALVDVHKG+LT+R+
Sbjct: 77  YLEGKIEDFLVQVDKFIFPADFIILDYDADKKVSIILGRSFLATGKALVDVHKGELTIRV 136

[Close]

BLAST of Moc11g30970 vs. ExPASy TrEMBL
Match: A0A6J1D3P6 (uncharacterized protein LOC111017014 OS=Momordica charantia OX=3673 GN=LOC111017014 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 77/123 (62.60%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKDPRSF+IPI I GQKI  ALCDLGASINL+PLS+Y KLG GEAR TTVTLQLAD+S+T
Sbjct: 131 MKDPRSFTIPISIGGQKIGLALCDLGASINLIPLSIYNKLGIGEARPTTVTLQLADQSLT 190

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTMRI 103
           + EGKIEDVL                     EV II+ R FLA  RALV+VHKGKLTMR+
Sbjct: 191 HPEGKIEDVLVQVDKFIFPIDFIILDYDADKEVHIIIRRPFLATERALVNVHKGKLTMRV 250

[Close]

BLAST of Moc11g30970 vs. ExPASy TrEMBL
Match: A0A6J1DQT7 (uncharacterized protein LOC111022956 OS=Momordica charantia OX=3673 GN=LOC111022956 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29
Identity = 76/123 (61.79%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 1   MKDPRSFSIPIFIRGQKIRQALCDLGASINLMPLSVYKKLGTGEARLTTVTLQLADRSIT 60
           MKD  SF+IP+ I GQKI QALCDLGASI LM LSVYKKLG G+AR+TT+T+QLADRSIT
Sbjct: 42  MKDLGSFTIPVAITGQKIGQALCDLGASIKLMSLSVYKKLGMGKARITTITIQLADRSIT 101

Query: 61  YHEGKIEDVL---------------------EVSIILGRSFLAIGRALVDVHKGKLTMRI 103
           + EGKIEDVL                     EV IILGRSFL  GR LVDVHKG++TMR+
Sbjct: 102 HPEGKIEDVLVQVDKFIFPADFIILDYDANKEVPIILGRSFLDTGRTLVDVHKGEVTMRV 161

The following BLAST results are available for this feature:

BLAST of Moc11g30970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158748.1	5.5e-31	51.67	uncharacterized protein LOC111025212 [Momordica charantia]	[more]
XP_022155367.1	1.0e-29	48.63	uncharacterized protein LOC111022509 [Momordica charantia]	[more]
XP_022158600.1	1.4e-29	62.60	uncharacterized protein LOC111025057 [Momordica charantia]	[more]
XP_022148334.1	2.3e-29	62.60	uncharacterized protein LOC111017014 [Momordica charantia]	[more]
XP_022155972.1	4.0e-29	61.79	uncharacterized protein LOC111022956 [Momordica charantia]	[more]

BLAST of Moc11g30970 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g30970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWZ3	2.7e-31	51.67	uncharacterized protein LOC111025212 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DP51	5.0e-30	48.63	uncharacterized protein LOC111022509 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DWA2	6.6e-30	62.60	uncharacterized protein LOC111025057 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D3P6	1.1e-29	62.60	uncharacterized protein LOC111017014 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DQT7	1.9e-29	61.79	uncharacterized protein LOC111022956 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Moc11g30970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..74 e-value: 1.3E-10 score: 43.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..183
None	No IPR available	PANTHER	PTHR33067	FAMILY NOT NAMED	coord: 2..119
None	No IPR available	PANTHER	PTHR33067:SF28	SUBFAMILY NOT NAMED	coord: 2..119
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 9..82 e-value: 9.18467E-10 score: 51.1832

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g30970.1	Moc11g30970.1	mRNA