Moc11g30800 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g30800
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr11: 22479795 .. 22487675 (-)
RNA-Seq Expression	Moc11g30800
Synteny	Moc11g30800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGAAGGAAAGGAGAATGCTCACCAAGTTTGGACTTCTTTAGAAGAAATCTTATTATCTATTACAAAGGAGAACAAGATTCATGTCAATGAATCTCTACACTGTTTGAAGAAGGGAAGTCTATCATTGGAAGAATACATAAAACGATTCAAGGCTTTAAGTGACAAGTTAGCAGCCATGAAAAGGCTCCTTGATAATATGATAAAAGTCTTCACTTCGGCTAGAGGATTGGGAAGTGACTACATGAATTTTAAAATAGCAATGTTGTCAAAGGCACGTTACCCTACATTCAATCAATTCATTCTTGCACTAAAAGCCCATGATCAAATGAACCAACTTAAAGTTGAAGGAGAAAGAGTTGGAATTCCTAATCACAATCAAGCTTTCTTCAGTCAAAGAAAAGGATATCGTGGTAGAGGAAGATAATTTACTTCACGAGGAAGGGGATTCCAACCTAGTCGAAGTCAAAATTCACAAGAAACTCATTTTGCAAATAATTTCAGCCATCGATCATCTCCTGGAAACTCCTCAGCCAAAAATCAAAGTAAGTCAAGTCCATGTCAAATTTGTGGTAGAACTAACCATACTGCGATGAAATGTTGGAACAGATTCGATCATACATATCAGCCTGATGATGTTCCCAAAGCCCTTGCTGTTGTTGCTCTACAGGAAGAAAATGATTTAAACTTATACGCTGACTCTGGAGCCACGACACATGTGATTAATGATCCAGGTGTGATTCATTCTACTAACAAATATATTGGAAATGAGAAAATGTATGTTGGAAATGGTGAAGTATTAAACCACTCACATAGGAACCGGTAAGATTTCAATAAATGGAAATCAACCTATAAAATTGGAAAAAGTACTTGTAGTTCCTAATATGAAGAAAATTTTGTTATCTATAAGCAAATTAACCTTTAACAATGATTGCTTGATAATTTTTTTGCTGATGGATTTATTATAAAGGACAAGCAGGGGAGAACCATGACCAAAGGAATTAATAGAGAGAGTCTATATGCTTTAGAAGATGCATCACAACATGTTGCTCCACATTCTGTTTTTTCTGCTATTTCTACTCAAAATAAGGTTGATTACACTGTATGGCATAGAAGAATTGGCCACATTAATGAAGCTGCTTTAAAAACTCTTTGCAATCAACACATGATCCATGTGTCAAATTGGGAAAATGAAAAGTTTATTTGCTCTAGTTGTCAAATGAGTAAAAGTTGCAAGTTACCTTTTAGCTCTAATGTTGAACTAAGTTTATGTTCTCTTAATAAAGTTCATTGTGATTTGTGAGGTCCTGCTCCTATTATTTCATGTCAAGGCTTTAAATATTATGTGAGTTTTGTGGATGACTACTCTAGGTTCACTTGGATATATCCCTTGAAGAAGAAATCTGATTTATATGCTTGCTTCTCTAAGTTTCAAAGGTTAGTTGAAAATCAATTTGAAATAAAGATAAAAGTGTTACAATCTGATGGAAGAGGTGAATTCATGTCCCTTAATCTCAAAACTCTCTTAGAACAAAGTGGAATTAGACACCAAATGTCATGTCCTCACACACCACAACAAAATGGTAGAAACTAGTTTGACCATACTTTTTCAATCTAATGTTCCCATGAAGTATTGGTAGATGCATTTCTTACTGTCACTTTCTTGATAAATAGAATGTCATCAAATGTTTTAGGAATGAGCACACCATTTGAAAAGTTATATAAAAAGAAACCTAGTTACAATAATCTAAAGATTTTTGGCTGTAGATGCTTTTCATACTTGAGAAATTACACCAAAGATAAATTTTCCAAAAGAACTTATCCTTGTGTGTTTATTGGATATAGTCCTGTACGTAAAGGATATAGATGTCTTGATCCTAGAACAAATAGAGTGTATATCTCAAGGCATGTTGTGTTTGATGAACAATTATTTCCATTTTGCCAAAGCTCTCTGTCAACTACTAACATCTCCCAAAGCCTAGATGTGACTGTGTTTGCAGATGAAGAAATGTGGAACATGCCTAGCTCCAGCACACTAAACCCGCATCATAGAGCAATGGTGGAACAATCCTCTAACACAAAATACACCTTTGAAAATCACATCAGAAATAGGTACGATGATCTGAGCAATCCAAGAACTAATATTGAAGAGCCTATTGACTACTCCTCCACTCAAACTCTCATAAATCAAGAGTCTATAAGGGTGTTGACAAGTGATAGTGAGGTATTAGTAGATAAGTCTCCAACAACTATCTTAGAAGCACAATCTAAACTGTCACTTGCTTAATAATAGTGATGACTTTCATATTGAGTTGCCACTTGCTCCCAATAATAGTGATGACTTTTATATTGAGTTGCCCATTGAATTAGGTGTCAATTCTCTAAATGAGTTATCAAGTGAAGTGCAGGGAAGTGGTGAATCTCAATGCTTAGGTGCAAACACACAAGGAGCCACAACCAACACACACTCAATGATTACTCGAAGCAAAGCAGTGAAGAATCAAGCAAGTGTCCTCTGTGATCAAAATCTAAGCGAGAGAATCGAAGGCAATGTCACTGTTAATTACATGATGGCTATAAAACAAACAATAGAGCCCAAAGGATACAAAAGTGCCCTTAAAATTCATCGTTGGAAGGAAGCTATGGATGACGAGATTAAAGCTCTTTATGAAAACCAAACATGGGAACTCACGCAAAGACCTCCAAACACAAACATTGTAAGGTGCAAATGGATTTTCAAAACCAAACTAAAGGAAGATGGATCGGTGGAACATTATAAGGCAAGATTAGTTGCTCAACCAGGTATAGACTATAATGAAACCTTCAACCCTGTCATTAAACACACTACAATCAGGTTAGTACTTGCACTTGCTGTATCTAAAAATTGGTCTTTTAGACAGCTAGATGTCAAAAATGTCTTTCTCCATGGCTGTCTAAAAGAAGAAGTTTACATGTCCCAACCTCCAGGTTATATACACCCTAAGCTTCCTAACCATGTTTGCAAATTAAAAAAGTTTTATACGGTTTGAAATAAGCTCCTCGAGCTTGGTTTGATTTCTTATCTCAATATCTCATCATTCATGGCTTTGTATGTAGTAGAAATGACCCATCTTTATTCATTTTTAAGATAGATGAGATCATTACCTTCATGCTTGTATATGTTGATGATATCATACTTACAGGAACTGATACTAATTTCTTGACTCATCTTATCAAGAGACTAAGTACAAAGTTTGCATTAAAGGATTTAAGGGATTTAAAGTTCTTTTTAGGTATTGAAGTTCAGCCAACAGCTCAAGGAATTAACGTCACTCAAACAAAATACATGAAAGAATTGTTGGAAAAGGCTGATATGCTCGAGTCCACTTCCATTGCAACACCTATGTCCACTTCAAACTTAAAAACTCCAAAAGATGATGAGTTAGTTGATCCAACCACATACAAAAATTTAGTTGGCTCTCGTCAATATCTCACCTTAACTAGACCTGACATTGTTCAAGTTGTTAATAAAGTTTTCCAACATCTTCAACAACCCCATCTTCAACACATGCGAGCAGTCAAGAGGATACTTTATTATCTCAAAGGAAAAATGACACATGGTATATCCTTCTCCAAACATAGTTCGAATAACTTATATGCATTTTGTGATGCAGATTGGGGGAGGGGGGGATGTCTAACAATAAGAAGGAGCACCACAGTCTGTGTGTTCCTTGGATCAAATTTAATATCCTGGTCATCAAAGAAACCTACAGTGTCATGATCTAGCTCTGAAGCAGAATATCGGGCAATGGCAAACACAACGGCTGAGTTAACATGGATATCCTTTTTTGCTAAGAGACATGCATATTCCTCATTTAAAACCTCCTCAACTCTTTTGTGATAACATGAGTGCATTGCATATGTCTATAAATCTAGTGTTTCATGCTAGAACTAAACATATTGAACTTGATTACCACTTTGTTCGAGAAAAAGTAGCCATGGCTCACTAATTACTAGATATGTTCCTTCTCATGATCAACTGGCTGGCATCCTCACAAAGCCACTAGCAACGGTCACCTTCAGAACACTAAGGAGCAAACTTGGCATTTGGTCCATCCTACCTCCAGTTTGAAGAAGAATGAAAAGCTCCACAAGTTGCCACATTGAAGCCACGTTGAAGCAGGTGTCAATTTCACAATCTCTAAAATTGTGGCTTCATTGAAATTTAATGAAATTTGGAATTTGGTGGAATTTCCTAAAATTCCTCATATCGATTAGCAAATTCTCACCCCATAACGGGCTAATTGCGCAGATTTGGCTCCCTTCGAATTGGTCAGTGTCTTTCTGTTTTTAATTTAATTAGTATATATTTTGTAATTAAAATCATGGACACACATTCTTAATTTGTCCTCCTACCTTTTGTATTTTGGACAATTAAGGATTTTGTCTATTGTTTTATTATCTTTCTTTTTCTGGTTACCTTCACCCTTGTGTAGTTAAATAGAGATGAATCTCACTGTATTCAATGAGAATAGTTATTCTGTTGTAAATCAATCAAGGATTCATCTTTTTTTCTTAATTTATATCTCGATGAATGGTGCACCAAAGAAAGAACTTGCACCATTTACGAAAAGGTAAAGCCCATAAATTTGCAGCTGTGGTGGAGACGTCGAATGGAATACCTATTTCTTCACTGTACTTTTACAGCTTATTTATGGGCTCGCCTCCTCTCCACTTTCCACTTGGATATTGCGCTTCTGAACCGAATAGATACTTTTATCCTCGAGAGTTTGTTCTTATCTACGAACAACCAGCATAACATCCTTTGGTGCAATGCAATCGGTAGTCTTTTATGGCACATTTGGTTGGAAAGAAACAAAATCAAACACTCATGGATTCTAACAAAAGCCTCACAAATATTTGGGAAGATATCATTGCCTCAACTTGGACATCCAAATCTTCCATCTTTTGTAATTACAATATTGTAATCATTTCTCTCCATTGGAGTGCTTTCATTGAAGCCTCTTTTTTTGTATGTATGTTCCTCACATACTACAATGAATGGTACTTCATTTTCCAAAAAAAAAAAAAAAGAAAGCTCTCGTCCAGGAGAATAAAAGAGGTTGGGAATAAGCTATTTTTAGAAAAAGTTTTCAAATCTGTCAAAGGTTTACTTGCCCATGCTCGATCTTGCCCATTCCCACCCAATAAACCCTCAACCAAAAGGTCCCTTAGATTGCAGGCAATTGTCGGGTTGATAACTAATTAATTATTTATTATTCTTAATTAATTAATTTACTATTTACCATTAATTTTTTATGACATGTTTTATAATTTTATAAATTAAAGAAACGTTATAATAGTCTAAAAATATTTTTTTCAAAATCTTACTTTTTTAATATAGATATAGATATAATTTTTTTTAAATAGACTAGAAAAATAATATTAAAAAAGACGAATTTTTCTTTGTTCTAATTATTCACACCAATTCTTTATTGATCTAAGTTGGAATTAGTAACGATTTGTTTGTTTCATTTATAGTAATTATTCACACCCTTCTAACTTTATTCCAAAACTACAACCACTAAATCTTCCCATTCTTCTCTTCTTTTTTATTAAAATTAAAAAAAAAAAGACCTAGTAGAAAAGCCAAAGTTATAAGTAAAAGCTTGAGGAAAGGGAGTATGAGCATGGAAGAATATTGGAAGAAATTCAAGGGGTTGTGCGATAAACTAGCAGCAATGAAGAAACCCCTTGATGACACAACCAAAGTCTTCTATCTTGCGAGGGGATTAGGAGGTAAGTATAAGGATTTTAGAATTGCAATGCTTTTCAAAGCCCCTTATCCCTCTTACAACCAATTTGTGTTGGCTTTTAAGAACCATGAAAAACAATTAATTGCTGAGTCAAGAGGAGGAAAAACATCATACCATTGACCATAACCAAGCCTTTCTCGGGCAAATGGCAAGGTCTAGAGGAAGAGAAACGCACTACGTAGCTAGAGAAGGAGGTGCCTACCGAAACCGAAATCACACTGCGCATCAAATGAGCCAACCTGTTACGACTCAACAAGACTATAGAAATTTTAGTCCAAGCAGTCACAAATCAAATCAAAAGGAGAAGGTTGAATGCTAGATATGCGGTAAGTTCAACCACACGGCTCTAAAATGCTGGAATAGGTTTGACCACAACTACCAAAATGAAGAGATTCCAAAAGCTCTAGTAGCCCTAGGCATGAATGAAATCATTGATCCAACACTGTTTGCAGATTCTGGAGCCACGACACACATAGTAAATGATCCTGGTACGATCTCCCTTTCAAAACCTTATAATGGAACTGAAAAATTATATGTAGGAGATGGAAATGGCTTAAACATAACTCACACTGGATCTTGTCATGTTCAAACTGATTTCTCTAAGCTAAAACTGAACGATGTCTTGGTGGTTCCTGAAATAAAGAAAAACTTGATGTCAATTAGTAAACTTACTTTAGATAATGACTGTCTAATTACATTTGATAAATTTGGTTTCGTTATTAAGAAAAAATAGGGACAAATCTTGGGCAAGGGTCATAAAAGGGAGGGCCTCTATGCATTGGTTGAGGAAAACAAGCAAGCTCTCCAAGCTTTTACTGCAACAACAAGCTCTAATAAAGCACATTTCTATATTTGGCACAAACGTATGGGTCATCTAAATGATGAGGCCCTGAAGCATTTGAATAATTCTCATCTCTTACCAGTTGTTAGTTGGAACAAAACTAGAAATTTGTGTGATTTCTGTCAAATGGGCAAGAGTTGTCAACTTCCTTTCAAGTTAAATAAACACATAAGTAGTTATCCTCTTTATAAAGTAGATTGTGATCTTTGGGGACCGTCTCCCATTAATTCTATTCTAAGGTTTTAGATACTATGTGAGCTTTGTAGATGATTTCTCAAGGTTTTGTTGGATTTACCGTTTTAAGGAAAAAATCTGATTTTCTTTGTTGTTTCATTAAATTTCAAAATCTTGTGGAAAACCAATTTGAAAGGAAGATAAAAAATTTTCAAAGTGATGGAGGGGTGAGTTTACATCTGGGTCTTAAAAGCTTATTTGAACAAAAAGGGATCATTCACCAATTCTCATGTCCTCACACCCCACAACAAAATGGACTTGTTAAGAGAAAACATAGGCACATAGTAGAGACCGGGCTAACACTTCTCTTTCAATCTAAAGTTCCCCCTATGCTTTTCTTACTGTTGTGTTCTTGATAAATAGAATGCCCTCTAAAAACCTTAATTTCTTGAAATTGTTTAATAGAGAACCTGACTATAGTGGCATCAAAGTCTTTGGATGCAAGTGTTTTCCTTACCTTAGAAACTACAACAAAAACAAACTCTCAAAGAGAACTTATCCTTGTGTGTTTCTAGGATATAGCCCCATTCTCAAAGGTTATAGGTGTTTGGACCTTTGACAAACAAAATTTATATTTCAAGGCATGCTGTTTTTTATGAAAATATTTTTCCTTTTGAACCTTAATAACAAAACTGACACACAATGCATGGATAACTCTCTTGTTACTTCTGAGTTTACAGATTTTGAAGAATGGCATGACCCATCTAGCATGGCAAATCAAACACCTCAAGATGACTATATAGATGTCAGACAACAGAAAATGGAGGAAACTACTTACACTAGAAAACATACTCATTTGGATGACAATGAAACTTCCTCAAACCTACTGATAGACAATAATATTGCAGATCAATCACAAAATCCTTTCCAAGGTAGAAATAATACTTCAAGTCTTGAGATGCAATCACCAGACAAGCAACAAATTGAGGAAAACAATGTATCTCAAATTAAAGTCTCTAATCCTCACCAAAACTCTACCCAAAGAGCTGAAATACAATGGCAATATTAA

mRNA sequence

ATGATTGAAGGAAAGGAGAATGCTCACCAAGTTTGGACTTCTTTAGAAGAAATCTTATTATCTATTACAAAGGAGAACAAGATTCATGTCAATGAATCTCTACACTGTTTGAAGAAGGGAAGTCTATCATTGGAAGAATACATAAAACGATTCAAGGCTTTAAGTGACAAGTTAGCAGCCATGAAAAGGCTCCTTGATAATATGATAAAAGTCTTCACTTCGGCTAGAGGATTGGGAAGTGACTACATGAATTTTAAAATAGCAATGTTGTCAAAGGCACGTTACCCTACATTCAATCAATTCATTCTTGCACTAAAAGCCCATGATCAAATGAACCAACTTAAAGTTGAAGGAGAAAGAGTTGGAATTCCTAATCACAATCAAGCTTTCTTCAGTCAAAGAAAAGGATATCGTGATGAAGAAATGTGGAACATGCCTAGCTCCAGCACACTAAACCCGCATCATAGAGCAATGGTGGAACAATCCTCTAACACAAAATACACCTTTGAAAATCACATCAGAAATAGGTACGATGATCTGAGCAATCCAAGAACTAATATTGAAGAGCCTATTGACTACTCCTCCACTCAAACTCTCATAAATCAAGAGTCTATAAGGGTGTTGACAAGTGATAGTGAGTTGCCACTTGCTCCCAATAATAGTGATGACTTTTATATTGAGTTGCCCATTGAATTAGGTGTCAATTCTCTAAATGAGTTATCAAGTGAAGTGCAGGGAAGTGGTGAATCTCAATGCTTAGATTTTGAAGAATGGCATGACCCATCTAGCATGGCAAATCAAACACCTCAAGATGACTATATAGATGTCAGACAACAGAAAATGGAGGAAACTACTTACACTAGAAAACATACTCATTTGGATGACAATGAAACTTCCTCAAACCTACTGATAGACAATAATATTGCAGATCAATCACAAAATCCTTTCCAAGGTAGAAATAATACTTCAAGTCTTGAGATGCAATCACCAGACAAGCAACAAATTGAGGAAAACAATGTATCTCAAATTAAAGTCTCTAATCCTCACCAAAACTCTACCCAAAGAGCTGAAATACAATGGCAATATTAA

Coding sequence (CDS)

ATGATTGAAGGAAAGGAGAATGCTCACCAAGTTTGGACTTCTTTAGAAGAAATCTTATTATCTATTACAAAGGAGAACAAGATTCATGTCAATGAATCTCTACACTGTTTGAAGAAGGGAAGTCTATCATTGGAAGAATACATAAAACGATTCAAGGCTTTAAGTGACAAGTTAGCAGCCATGAAAAGGCTCCTTGATAATATGATAAAAGTCTTCACTTCGGCTAGAGGATTGGGAAGTGACTACATGAATTTTAAAATAGCAATGTTGTCAAAGGCACGTTACCCTACATTCAATCAATTCATTCTTGCACTAAAAGCCCATGATCAAATGAACCAACTTAAAGTTGAAGGAGAAAGAGTTGGAATTCCTAATCACAATCAAGCTTTCTTCAGTCAAAGAAAAGGATATCGTGATGAAGAAATGTGGAACATGCCTAGCTCCAGCACACTAAACCCGCATCATAGAGCAATGGTGGAACAATCCTCTAACACAAAATACACCTTTGAAAATCACATCAGAAATAGGTACGATGATCTGAGCAATCCAAGAACTAATATTGAAGAGCCTATTGACTACTCCTCCACTCAAACTCTCATAAATCAAGAGTCTATAAGGGTGTTGACAAGTGATAGTGAGTTGCCACTTGCTCCCAATAATAGTGATGACTTTTATATTGAGTTGCCCATTGAATTAGGTGTCAATTCTCTAAATGAGTTATCAAGTGAAGTGCAGGGAAGTGGTGAATCTCAATGCTTAGATTTTGAAGAATGGCATGACCCATCTAGCATGGCAAATCAAACACCTCAAGATGACTATATAGATGTCAGACAACAGAAAATGGAGGAAACTACTTACACTAGAAAACATACTCATTTGGATGACAATGAAACTTCCTCAAACCTACTGATAGACAATAATATTGCAGATCAATCACAAAATCCTTTCCAAGGTAGAAATAATACTTCAAGTCTTGAGATGCAATCACCAGACAAGCAACAAATTGAGGAAAACAATGTATCTCAAATTAAAGTCTCTAATCCTCACCAAAACTCTACCCAAAGAGCTGAAATACAATGGCAATATTAA

Protein sequence

MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAAMKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGERVGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDLSNPRTNIEEPIDYSSTQTLINQESIRVLTSDSELPLAPNNSDDFYIELPIELGVNSLNELSSEVQGSGESQCLDFEEWHDPSSMANQTPQDDYIDVRQQKMEETTYTRKHTHLDDNETSSNLLIDNNIADQSQNPFQGRNNTSSLEMQSPDKQQIEENNVSQIKVSNPHQNSTQRAEIQWQY

Homology

[Close]

BLAST of Moc11g30800 vs. NCBI nr
Match: XP_022154021.1 (uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncharacterized protein LOC111021379 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-33
Identity = 81/134 (60.45%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           ++EG E A +VW SLEE+LL++TKEN+IH+NE+L  LKKGSLS++EYI++FK L D+L A
Sbjct: 97  LLEGTETAKEVWHSLEELLLTMTKENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXA 156

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           MK+ LD++ KVF  ARGLG  Y +F+ AMLSKA YP++NQF+LALKAHDQ      E ER
Sbjct: 157 MKKPLDDLTKVFHLARGLGIKYKDFRTAMLSKAPYPSYNQFVLALKAHDQF-LTDEEEER 216

Query: 121 VGIPNHNQAFFSQR 135
               N NQAFFS R
Sbjct: 217 SSQVNLNQAFFSNR 229

[Close]

BLAST of Moc11g30800 vs. NCBI nr
Match: RVW93768.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 129.0 bits (323), Expect = 8.1e-26
Identity = 80/249 (32.13%), Postives = 133/249 (53.41%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G E A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 97  LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 156

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM  ++ E  +
Sbjct: 157 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMIENEENK 216

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH QA+F+QR   R+     +       P  R     +S+ +       +N +   
Sbjct: 217 ESI-NHEQAYFTQRGRGRNRGGRFLSKGRGFTPAGRFNNNATSDQR-------QNVHSST 276

Query: 181 SNPRTNIEEPIDYSSTQTLINQESIRVLTSDSELPLAPNNSDDFYIELPIELGVNSLNEL 240
            NPR +     DYS     I Q    +   + E         +FY++      + +  E+
Sbjct: 277 RNPRNSFNNQFDYSYQSEEIPQALAAMALHEEE------KDPNFYVDSGATAHITNDPEI 331

Query: 241 SSEVQGSGE 250
              +   G+
Sbjct: 337 KKNLLSIGQ 331

[Close]

BLAST of Moc11g30800 vs. NCBI nr
Match: RVW19921.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-24
Identity = 80/249 (32.13%), Postives = 138/249 (55.42%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G E A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 111 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 170

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM   + E  +
Sbjct: 171 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENK 230

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH QA+F+QR   R++    +       P  R     +S+ +    +  RN  +  
Sbjct: 231 ESI-NHEQAYFTQRGRGRNQGGRFLSRGRGFTPAGRFNNNATSDQRQNVHSSTRNPRNSF 290

Query: 181 SN------PRTNIEEPIDYSSTQTLINQESIRVLTSDSELPLAPNNSD-DFYIELPIELG 240
           +N          I+E    +S     N +++++  + + + L     D +FY++      
Sbjct: 291 NNHFHHNRSAPEIQEIASTTSFHHNRNFKNLKIPQALAAMALHEEEKDPNFYVDSGATAH 350

Query: 241 VNSLNELSS 243
           + +  E SS
Sbjct: 351 ITNDPEFSS 358

[Close]

BLAST of Moc11g30800 vs. NCBI nr
Match: RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-24
Identity = 71/186 (38.17%), Postives = 112/186 (60.22%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G E A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 142 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 201

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM   + E  +
Sbjct: 202 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENK 261

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH QA+F+QR   R+     +       P  R     +S+ +       +N Y   
Sbjct: 262 ESI-NHEQAYFTQRGRGRNRGGRFLSRGRGFTPAGRFNNNATSDQR-------QNVYSST 319

Query: 181 SNPRTN 187
            NPR +
Sbjct: 322 RNPRNS 319

[Close]

BLAST of Moc11g30800 vs. NCBI nr
Match: RVW82530.1 (hypothetical protein CK203_046287 [Vitis vinifera])

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-24
Identity = 67/182 (36.81%), Postives = 112/182 (61.54%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G + A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 114 LLDGTKTAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 173

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM   + E  +
Sbjct: 174 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENK 233

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH Q +F+QR   R++    +       P  R     +S+ ++   +  RN  +  
Sbjct: 234 ESI-NHEQTYFTQRGRGRNQGGRFLSRGRGFTPAGRFNNNATSDQRHNVHSSTRNPRNSF 293

Query: 181 SN 183
           +N
Sbjct: 294 NN 294

[Close]

BLAST of Moc11g30800 vs. ExPASy TrEMBL
Match: A0A6J1DMG5 (uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021379 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33
Identity = 81/134 (60.45%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           ++EG E A +VW SLEE+LL++TKEN+IH+NE+L  LKKGSLS++EYI++FK L D+L A
Sbjct: 97  LLEGTETAKEVWHSLEELLLTMTKENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXA 156

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           MK+ LD++ KVF  ARGLG  Y +F+ AMLSKA YP++NQF+LALKAHDQ      E ER
Sbjct: 157 MKKPLDDLTKVFHLARGLGIKYKDFRTAMLSKAPYPSYNQFVLALKAHDQF-LTDEEEER 216

Query: 121 VGIPNHNQAFFSQR 135
               N NQAFFS R
Sbjct: 217 SSQVNLNQAFFSNR 229

[Close]

BLAST of Moc11g30800 vs. ExPASy TrEMBL
Match: A0A438IAM2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3180 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-26
Identity = 80/249 (32.13%), Postives = 133/249 (53.41%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G E A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 97  LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 156

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM  ++ E  +
Sbjct: 157 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMIENEENK 216

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH QA+F+QR   R+     +       P  R     +S+ +       +N +   
Sbjct: 217 ESI-NHEQAYFTQRGRGRNRGGRFLSKGRGFTPAGRFNNNATSDQR-------QNVHSST 276

Query: 181 SNPRTNIEEPIDYSSTQTLINQESIRVLTSDSELPLAPNNSDDFYIELPIELGVNSLNEL 240
            NPR +     DYS     I Q    +   + E         +FY++      + +  E+
Sbjct: 277 RNPRNSFNNQFDYSYQSEEIPQALAAMALHEEE------KDPNFYVDSGATAHITNDPEI 331

Query: 241 SSEVQGSGE 250
              +   G+
Sbjct: 337 KKNLLSIGQ 331

[Close]

BLAST of Moc11g30800 vs. ExPASy TrEMBL
Match: A0A438C9J9 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1040 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-25
Identity = 80/249 (32.13%), Postives = 138/249 (55.42%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G E A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 111 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 170

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM   + E  +
Sbjct: 171 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENK 230

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH QA+F+QR   R++    +       P  R     +S+ +    +  RN  +  
Sbjct: 231 ESI-NHEQAYFTQRGRGRNQGGRFLSRGRGFTPAGRFNNNATSDQRQNVHSSTRNPRNSF 290

Query: 181 SN------PRTNIEEPIDYSSTQTLINQESIRVLTSDSELPLAPNNSD-DFYIELPIELG 240
           +N          I+E    +S     N +++++  + + + L     D +FY++      
Sbjct: 291 NNHFHHNRSAPEIQEIASTTSFHHNRNFKNLKIPQALAAMALHEEEKDPNFYVDSGATAH 350

Query: 241 VNSLNELSS 243
           + +  E SS
Sbjct: 351 ITNDPEFSS 358

[Close]

BLAST of Moc11g30800 vs. ExPASy TrEMBL
Match: A0A438E6Z5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1575 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.7e-25
Identity = 71/186 (38.17%), Postives = 112/186 (60.22%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G E A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 142 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 201

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM   + E  +
Sbjct: 202 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENK 261

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH QA+F+QR   R+     +       P  R     +S+ +       +N Y   
Sbjct: 262 ESI-NHEQAYFTQRGRGRNRGGRFLSRGRGFTPAGRFNNNATSDQR-------QNVYSST 319

Query: 181 SNPRTN 187
            NPR +
Sbjct: 322 RNPRNS 319

[Close]

BLAST of Moc11g30800 vs. ExPASy TrEMBL
Match: A0A438HDK5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_046287 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-24
Identity = 67/182 (36.81%), Postives = 112/182 (61.54%), Query Frame = 0


Query: 1   MIEGKENAHQVWTSLEEILLSITKENKIHVNESLHCLKKGSLSLEEYIKRFKALSDKLAA 60
           +++G + A+ VW SL E LL +TKE ++ +   L  +KKG+ SL+EY++ FK + D LAA
Sbjct: 114 LLDGTKTAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 173

Query: 61  MKRLLDNMIKVFTSARGLGSDYMNFKIAMLSKARYPTFNQFILALKAHDQMNQLKVEGER 120
           +++ + ++ KVF  A+GLG+ YM+F++AMLSK  YP++NQF+LAL+ H+QM   + E  +
Sbjct: 174 VRKPVSDLDKVFQLAQGLGTKYMDFRVAMLSKPPYPSYNQFVLALQGHEQMIMTENEENK 233

Query: 121 VGIPNHNQAFFSQRKGYRDEEMWNMPSSSTLNPHHRAMVEQSSNTKYTFENHIRNRYDDL 180
             I NH Q +F+QR   R++    +       P  R     +S+ ++   +  RN  +  
Sbjct: 234 ESI-NHEQTYFTQRGRGRNQGGRFLSRGRGFTPAGRFNNNATSDQRHNVHSSTRNPRNSF 293

Query: 181 SN 183
           +N
Sbjct: 294 NN 294

The following BLAST results are available for this feature:

BLAST of Moc11g30800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154021.1	2.4e-33	60.45	uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncha...	[more]
RVW93768.1	8.1e-26	32.13	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]
RVW19921.1	1.5e-24	32.13	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]
RVW43526.1	2.0e-24	38.17	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW82530.1	2.6e-24	36.81	hypothetical protein CK203_046287 [Vitis vinifera]	[more]

BLAST of Moc11g30800 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g30800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DMG5	1.1e-33	60.45	uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A438IAM2	3.9e-26	32.13	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A438C9J9	7.4e-25	32.13	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A438E6Z5	9.7e-25	38.17	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438HDK5	1.3e-24	36.81	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_046287 PE=4 SV=1	[more]

BLAST of Moc11g30800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..64
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 2..112 e-value: 1.5E-9 score: 37.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..362
None	No IPR available	PANTHER	PTHR47481:SF2	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 1..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g30800.1	Moc11g30800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003824	catalytic activity