Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCTTCAACTTGACAAAGACTTGAATTCATCGATTTTTCTTCTGTCAAACATCTGTAATTTGATTTCGATCGGGCTCGATTCAACAAATTTTGTTTTGTGGAAATTTCAACTCATGGCTATTCTAAAAGCTCACAAGCTTTTTGGTTTTATTGATGGATTGAAACCACCTCCAAAGAAATTTCTTCCTTCCACAAAATCTGGATCTGAATCGTCATCTCAATCTATTAATCCCGCCTATGAAGATTGGATTGCACGCGATCAAGCTCTTATGACGCTAATAAATGCTACTTTATCTCCATCTGCCCTAGCATACGTTGTCGGTAGTACCTCTCCGAAGGAAATTTGGGACACTCTGGAGAAGCATTATTCATCAAGCTCACGCACCAATGTTGTTAACCTCAAATCTGATCTTCAATCCATATCCAAGAAAGTCGGTGAGTCTATTGATGATTATGTAAAACGTATTAAGGAGGTTAAGGACAAATTAGCAAATGTCTCTGTAGTTGTTGATGATGAGGATCTGTTGATTTACACTTTGAATGGTTTACCGTCTGAGTATAATGTCTTTCGCACATCTATGGGTACTCGGTCTCAATCCGTTACTTTTGATGAACTCCATGTTCTTATGAAATCGGAGGAAGTTGCTTTGGACAAGCAGGTGAAACGAGATGATTTGTTTTCTCAAAATACTGCTCTATTTACTGTTCCGAATCCATCTCGCACGGCTCCTGTTTATAACTCAAATAGCTCTCGCGATAAAGGAAATCAGGGTCGTGGTCGTAATATTGGAAATCAAGGCCGTGGTCAATTTTATAAATCACTCTTTCGTAGTGATGGAGGGGGTGAGTTTATAAATGACTCTTTTCGTTCCTATCTCAATTCTCGTGGCATTCTTCATAAAAAATAATGTGCTTACACACCCGAACAAAATGGTGTGGCTGAATGCAAACACCGTCACATTGTTGAAATGGCCATTTCCCTAATGACTAAAGCTTCTATTCCTATTAAGTTCTGGTCATTTGCCTTCGCTGCTGCTGTATTCCTTATAAATCGTTTACCATCTCCTTCCTTAGCTCATAAATCTCCTTTTGAGTGTCTCTTTCGTCGACTCCCTAATTATTCTCATCTTAAAACATTCGGTTGCGCCTGCTATCCTATTTTAAAGCCATACAATTCACATAAACTTCTACCCAAAACATCGAAGTGTGTCTTTCTCGGTTATCCCTTAGATTATAAGGGTTATTTGTGCTACAACATGAGCTCTCACAAGTTCTATACCTCTAGACATGTTCCTTTTGATGAATCTTATTTTCCTTTCTCTACTGCTACTTCTTTTTCCCGTTCTTCTCCTTCTCCTATTTTACCTCTTCTCTTGTCTACTTTATCATCTCTGTCTAGCCCTTCCACGGTTTCATCATCTTCTTCTACTACCTCTCCCTTAGATTCTTCCACTGCCTCTGATTCTGATTTCTCTACTCATACTCCAACTACTGATTTAGGGTTGTCTTGTACACATCCACCAGCACCAGTTTCTCTGGTTGATGCATCACATACTGTACAATCTGTTGCTCATGGTTCTGCTGGTATTTCTTCCTCTGTTGTTGACATGAATACACCAACACCAACACCTATTCCTAGTTGTGTTCCACAATCCACAAATATCCATCCAATGGAAACTAGAGGCAAATCAGGGATATCTAAAAAGAAGGTTTTTGTTGCTTAA
mRNA sequence
ATGGCTTCCCTTCAACTTGACAAAGACTTGAATTCATCGATTTTTCTTCTGTCAAACATCTGTAATTTGATTTCGATCGGGCTCGATTCAACAAATTTTGTTTTGTGGAAATTTCAACTCATGGCTATTCTAAAAGCTCACAAGCTTTTTGGTTTTATTGATGGATTGAAACCACCTCCAAAGAAATTTCTTCCTTCCACAAAATCTGGATCTGAATCGTCATCTCAATCTATTAATCCCGCCTATGAAGATTGGATTGCACGCGATCAAGCTCTTATGACGCTAATAAATGCTACTTTATCTCCATCTGCCCTAGCATACGTTGTCGGTAGTACCTCTCCGAAGGAAATTTGGGACACTCTGGAGAAGCATTATTCATCAAGCTCACGCACCAATGTTGTTAACCTCAAATCTGATCTTCAATCCATATCCAAGAAAGTCGGTGAGTCTATTGATGATTATGTAAAACGTATTAAGGAGGTTAAGGACAAATTAGCAAATGTCTCTGTAGTTGTTGATGATGAGGATCTGTTGATTTACACTTTGAATGGTTTACCGTCTGAGTATAATGTCTTTCGCACATCTATGGGTACTCGGTCTCAATCCGTTACTTTTGATGAACTCCATGTTCTTATGAAATCGGAGGAAGTTGCTTTGGACAAGCAGGTGAAACGAGATGATTTGTTTTCTCAAAATACTGCTCTATTTACTGTTCCGAATCCATCTCGCACGGCTCCTGTTTATAACTCAAATAGCTCTCGCGATAAAGGAAATCAGGGTCGTGGTCGTAATATTGGAAATCAAGGCCGTGATTCTTCCACTGCCTCTGATTCTGATTTCTCTACTCATACTCCAACTACTGATTTAGGGTTGTCTTGTACACATCCACCAGCACCAGTTTCTCTGGTTGATGCATCACATACTGTACAATCTGTTGCTCATGGTTCTGCTGGTATTTCTTCCTCTGTTGTTGACATGAATACACCAACACCAACACCTATTCCTAGTTGTGTTCCACAATCCACAAATATCCATCCAATGGAAACTAGAGGCAAATCAGGGATATCTAAAAAGAAGGTTTTTGTTGCTTAA
Coding sequence (CDS)
ATGGCTTCCCTTCAACTTGACAAAGACTTGAATTCATCGATTTTTCTTCTGTCAAACATCTGTAATTTGATTTCGATCGGGCTCGATTCAACAAATTTTGTTTTGTGGAAATTTCAACTCATGGCTATTCTAAAAGCTCACAAGCTTTTTGGTTTTATTGATGGATTGAAACCACCTCCAAAGAAATTTCTTCCTTCCACAAAATCTGGATCTGAATCGTCATCTCAATCTATTAATCCCGCCTATGAAGATTGGATTGCACGCGATCAAGCTCTTATGACGCTAATAAATGCTACTTTATCTCCATCTGCCCTAGCATACGTTGTCGGTAGTACCTCTCCGAAGGAAATTTGGGACACTCTGGAGAAGCATTATTCATCAAGCTCACGCACCAATGTTGTTAACCTCAAATCTGATCTTCAATCCATATCCAAGAAAGTCGGTGAGTCTATTGATGATTATGTAAAACGTATTAAGGAGGTTAAGGACAAATTAGCAAATGTCTCTGTAGTTGTTGATGATGAGGATCTGTTGATTTACACTTTGAATGGTTTACCGTCTGAGTATAATGTCTTTCGCACATCTATGGGTACTCGGTCTCAATCCGTTACTTTTGATGAACTCCATGTTCTTATGAAATCGGAGGAAGTTGCTTTGGACAAGCAGGTGAAACGAGATGATTTGTTTTCTCAAAATACTGCTCTATTTACTGTTCCGAATCCATCTCGCACGGCTCCTGTTTATAACTCAAATAGCTCTCGCGATAAAGGAAATCAGGGTCGTGGTCGTAATATTGGAAATCAAGGCCGTGATTCTTCCACTGCCTCTGATTCTGATTTCTCTACTCATACTCCAACTACTGATTTAGGGTTGTCTTGTACACATCCACCAGCACCAGTTTCTCTGGTTGATGCATCACATACTGTACAATCTGTTGCTCATGGTTCTGCTGGTATTTCTTCCTCTGTTGTTGACATGAATACACCAACACCAACACCTATTCCTAGTTGTGTTCCACAATCCACAAATATCCATCCAATGGAAACTAGAGGCAAATCAGGGATATCTAAAAAGAAGGTTTTTGTTGCTTAA
Protein sequence
MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPKKFLPSTKSGSESSSQSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVYNSNSSRDKGNQGRGRNIGNQGRDSSTASDSDFSTHTPTTDLGLSCTHPPAPVSLVDASHTVQSVAHGSAGISSSVVDMNTPTPTPIPSCVPQSTNIHPMETRGKSGISKKKVFVA
Homology
BLAST of Moc11g30750 vs. NCBI nr
Match:
XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])
HSP 1 Score: 310.8 bits (795), Expect = 1.5e-80
Identity = 178/292 (60.96%), Postives = 213/292 (72.95%), Query Frame = 0
Query: 2 ASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPK 61
+S KDL+S IFLLSNICNL+SI LDST+F+LWKFQL AILKAHKLFGFIDG P
Sbjct: 25 SSTNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPS 84
Query: 62 KFLPSTKSGSESSSQS--------INPAYEDWIARDQALMTLINATLSPSALAYVVGSTS 121
+FL S+ SE+ SQ INP +EDWIA+DQALMTLINATLS ALAYVV S +
Sbjct: 85 QFLASS---SETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGT 144
Query: 122 PKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVD 181
K++W+ LEKHYSS+SRTNVVNLKSDLQSI KK ESID YVKRIKE+KDK ANVS+ ++
Sbjct: 145 SKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITIN 204
Query: 182 DEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNT 241
DE LLIY LNGL +EYN TSM TR+QSV+F+ELHV MKSEE A++KQ+KR+DL +Q
Sbjct: 205 DEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPN 264
Query: 242 ALF-TVPNPSRTAPVYNSNSSRDKG---NQGRGR-----NIGNQGRDSSTAS 277
ALF + P ++ N S D+G N GRG+ NQGR S+ +
Sbjct: 265 ALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGN 313
BLAST of Moc11g30750 vs. NCBI nr
Match:
XP_022157455.1 (uncharacterized protein LOC111024149 [Momordica charantia])
HSP 1 Score: 310.1 bits (793), Expect = 2.6e-80
Identity = 165/178 (92.70%), Postives = 166/178 (93.26%), Query Frame = 0
Query: 93 MTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESID 152
MTLINATLSPSA AYVVGSTS KEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGE ID
Sbjct: 1 MTLINATLSPSAPAYVVGSTSSKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGECID 60
Query: 153 DYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLM 212
DYVKRIKEVKDKL NVSVVVDDEDLLIYTLNGLPS YNVFRTSM TRSQSVTFDELHVLM
Sbjct: 61 DYVKRIKEVKDKLTNVSVVVDDEDLLIYTLNGLPSAYNVFRTSMRTRSQSVTFDELHVLM 120
Query: 213 KSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVYNSNSSRDKGNQGRGRNIGNQGR 271
KSEEVALD+QVKRDDLFSQNTALF VPNPS APVYNSNSSR KGNQG GR IGNQGR
Sbjct: 121 KSEEVALDRQVKRDDLFSQNTALFAVPNPSHMAPVYNSNSSRGKGNQGHGRTIGNQGR 178
BLAST of Moc11g30750 vs. NCBI nr
Match:
KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])
HSP 1 Score: 303.9 bits (777), Expect = 1.8e-78
Identity = 181/297 (60.94%), Postives = 213/297 (71.72%), Query Frame = 0
Query: 1 MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
+ S +KD S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKLFGF+DG P P
Sbjct: 7 LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLFGFVDGTNPCP 66
Query: 61 KKFLPSTKSGSESSSQSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDT 120
+ PST S + NP YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++WD
Sbjct: 67 QT-SPSTTS---TVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDV 126
Query: 121 LEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIY 180
L K YSS SR+NVVNLKSDLQ+I KK ESID Y+KRIKE+KDKLANVS +++EDLLIY
Sbjct: 127 LAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIY 186
Query: 181 TLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPN 240
LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +
Sbjct: 187 ALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQ 246
Query: 241 PSRT-APVYNSNSSRDKGNQGRGRNIGNQGR---DSSTASDSDFSTHTPTTDLGLSC 294
+ AP +N+N R GN G G+N G+ GR D+ T P D +C
Sbjct: 247 SLLSCAPTFNNNFVR--GN-GHGKNYGH-GRFSFDAQTRGHGLSQEQKPVHDNHATC 295
BLAST of Moc11g30750 vs. NCBI nr
Match:
XP_011658579.1 (uncharacterized protein LOC105436058 [Cucumis sativus])
HSP 1 Score: 303.9 bits (777), Expect = 1.8e-78
Identity = 181/297 (60.94%), Postives = 213/297 (71.72%), Query Frame = 0
Query: 1 MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
+ S +KD S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKLFGF+DG P P
Sbjct: 7 LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLFGFVDGTNPCP 66
Query: 61 KKFLPSTKSGSESSSQSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDT 120
+ PST S + NP YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++WD
Sbjct: 67 QT-SPSTTS---TVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDV 126
Query: 121 LEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIY 180
L K YSS SR+NVVNLKSDLQ+I KK ESID Y+KRIKE+KDKLANVS +++EDLLIY
Sbjct: 127 LAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIY 186
Query: 181 TLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPN 240
LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +
Sbjct: 187 ALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQ 246
Query: 241 PSRT-APVYNSNSSRDKGNQGRGRNIGNQGR---DSSTASDSDFSTHTPTTDLGLSC 294
+ AP +N+N R GN G G+N G+ GR D+ T P D +C
Sbjct: 247 SLLSCAPTFNNNFVR--GN-GHGKNYGH-GRFSFDAQTRGHGLSQEQKPVHDNHATC 295
BLAST of Moc11g30750 vs. NCBI nr
Match:
XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])
HSP 1 Score: 302.8 bits (774), Expect = 4.1e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0
Query: 1 MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
+ S +KD S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG P P
Sbjct: 7 LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66
Query: 61 KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
P T + S +S+ NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67 ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126
Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
D L K YSS SR+NVVNLKSDLQ+I KK ESID Y+KRIKE+KDKLANVS +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186
Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246
Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
+ AP +++N R G + G GR + +G SS S H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294
BLAST of Moc11g30750 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 3.9e-07
Identity = 33/114 (28.95%), Postives = 56/114 (49.12%), Query Frame = 0
Query: 83 EDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQS 142
EDW D+ + I LS + ++ + + IW LE Y S + TN + LK L +
Sbjct: 50 EDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYA 109
Query: 143 ISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSM 197
+ G + ++ + +LAN+ V +++ED I LN LPS Y+ T++
Sbjct: 110 LHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTI 163
BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match:
A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)
HSP 1 Score: 310.8 bits (795), Expect = 7.3e-81
Identity = 178/292 (60.96%), Postives = 213/292 (72.95%), Query Frame = 0
Query: 2 ASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPK 61
+S KDL+S IFLLSNICNL+SI LDST+F+LWKFQL AILKAHKLFGFIDG P
Sbjct: 25 SSTNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPS 84
Query: 62 KFLPSTKSGSESSSQS--------INPAYEDWIARDQALMTLINATLSPSALAYVVGSTS 121
+FL S+ SE+ SQ INP +EDWIA+DQALMTLINATLS ALAYVV S +
Sbjct: 85 QFLASS---SETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGT 144
Query: 122 PKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVD 181
K++W+ LEKHYSS+SRTNVVNLKSDLQSI KK ESID YVKRIKE+KDK ANVS+ ++
Sbjct: 145 SKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITIN 204
Query: 182 DEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNT 241
DE LLIY LNGL +EYN TSM TR+QSV+F+ELHV MKSEE A++KQ+KR+DL +Q
Sbjct: 205 DEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPN 264
Query: 242 ALF-TVPNPSRTAPVYNSNSSRDKG---NQGRGR-----NIGNQGRDSSTAS 277
ALF + P ++ N S D+G N GRG+ NQGR S+ +
Sbjct: 265 ALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGN 313
BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match:
A0A6J1DT57 (uncharacterized protein LOC111024149 OS=Momordica charantia OX=3673 GN=LOC111024149 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 165/178 (92.70%), Postives = 166/178 (93.26%), Query Frame = 0
Query: 93 MTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESID 152
MTLINATLSPSA AYVVGSTS KEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGE ID
Sbjct: 1 MTLINATLSPSAPAYVVGSTSSKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGECID 60
Query: 153 DYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLM 212
DYVKRIKEVKDKL NVSVVVDDEDLLIYTLNGLPS YNVFRTSM TRSQSVTFDELHVLM
Sbjct: 61 DYVKRIKEVKDKLTNVSVVVDDEDLLIYTLNGLPSAYNVFRTSMRTRSQSVTFDELHVLM 120
Query: 213 KSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVYNSNSSRDKGNQGRGRNIGNQGR 271
KSEEVALD+QVKRDDLFSQNTALF VPNPS APVYNSNSSR KGNQG GR IGNQGR
Sbjct: 121 KSEEVALDRQVKRDDLFSQNTALFAVPNPSHMAPVYNSNSSRGKGNQGHGRTIGNQGR 178
BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match:
A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0
Query: 1 MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
+ S +KD S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG P P
Sbjct: 7 LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66
Query: 61 KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
P T + S +S+ NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67 ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126
Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
D L K YSS SR+NVVNLKSDLQ+I KK ESID Y+KRIKE+KDKLANVS +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186
Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246
Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
+ AP +++N R G + G GR + +G SS S H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294
BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match:
A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0
Query: 1 MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
+ S +KD S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG P P
Sbjct: 7 LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66
Query: 61 KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
P T + S +S+ NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67 ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126
Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
D L K YSS SR+NVVNLKSDLQ+I KK ESID Y+KRIKE+KDKLANVS +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186
Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246
Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
+ AP +++N R G + G GR + +G SS S H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294
BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match:
A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0
Query: 1 MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
+ S +KD S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG P P
Sbjct: 7 LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66
Query: 61 KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
P T + S +S+ NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67 ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126
Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
D L K YSS SR+NVVNLKSDLQ+I KK ESID Y+KRIKE+KDKLANVS +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186
Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246
Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
+ AP +++N R G + G GR + +G SS S H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294
BLAST of Moc11g30750 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 73.6 bits (179), Expect = 3.8e-13
Identity = 74/272 (27.21%), Postives = 131/272 (48.16%), Query Frame = 0
Query: 14 IFLLSNICNLISIGLD--STNFVLWKFQLMAILKAHKLFGFIDGLKPPPKKFLPSTKSGS 73
I+ +SNI + I + LD +N+ W+ + + + G IDG P
Sbjct: 10 IYGVSNIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLP------------ 69
Query: 74 ESSSQSINPAYEDWIARDQALMTLINATLSPSAL--AYVVGSTSPKEIWDTLEKHYSSSS 133
+++ +N W RD + + TL+P ++V STS ++IW ++ + ++
Sbjct: 70 -TNANDVN-----WQKRDGIVKLSLYGTLTPKQFQGSFVTSSTS-RDIWLRIKNQFRNNK 129
Query: 134 RTNVVNLKSDLQSISKKVGE-SIDDYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSE 193
+ L S+L+ +K +G+ + DY +++K++ D L NV V V D +L++Y LNGL +
Sbjct: 130 DARALRLDSELR--TKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPK 189
Query: 194 YNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVY 253
++ + R +FD+ +++ EE L + +K + +++ TV S PV
Sbjct: 190 FDNIINVIKHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPV- 249
Query: 254 NSNSSRDKGNQ------GRGRNI--GNQGRDS 273
+N R GNQ GRG NI G GR S
Sbjct: 250 -TNFQRSGGNQMGYRGRGRGNNIFRGRGGRFS 258
BLAST of Moc11g30750 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 50.4 bits (119), Expect = 3.4e-06
Identity = 31/143 (21.68%), Postives = 68/143 (47.55%), Query Frame = 0
Query: 29 DSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPKKFLPSTKSGSESSSQSINPAYEDWIAR 88
D N+V WK + + L+ K FGFIDG P P F +P Y+ W
Sbjct: 38 DEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPF---------------SPLYQPWEQC 97
Query: 89 DQALMTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVG 148
+ +M + +++ L V+ + + ++W+ L + + + L+ L ++ ++ G
Sbjct: 98 NAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATL-RQGG 157
Query: 149 ESIDDYVKRIKEVKDKLANVSVV 172
+S+++Y ++ +V +L+ + +
Sbjct: 158 DSVEEYFGKLSKVWMELSEYAPI 164
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022150845.1 | 1.5e-80 | 60.96 | uncharacterized protein LOC111018892 [Momordica charantia] | [more] |
XP_022157455.1 | 2.6e-80 | 92.70 | uncharacterized protein LOC111024149 [Momordica charantia] | [more] |
KAE8645659.1 | 1.8e-78 | 60.94 | hypothetical protein Csa_020439 [Cucumis sativus] | [more] |
XP_011658579.1 | 1.8e-78 | 60.94 | uncharacterized protein LOC105436058 [Cucumis sativus] | [more] |
XP_008448007.1 | 4.1e-78 | 60.27 | PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 3.9e-07 | 28.95 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D9L6 | 7.3e-81 | 60.96 | uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DT57 | 1.2e-80 | 92.70 | uncharacterized protein LOC111024149 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A5D3CLI6 | 2.0e-78 | 60.27 | T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=... | [more] |
A0A1S3BI58 | 2.0e-78 | 60.27 | uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4DWT9 | 2.0e-78 | 60.27 | uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
AT1G34070.1 | 3.8e-13 | 27.21 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G21280.1 | 3.4e-06 | 21.68 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |