Moc11g30750 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g30750
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Locationchr11: 22455481 .. 22457211 (+)
RNA-Seq ExpressionMoc11g30750
SyntenyMoc11g30750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCTTCAACTTGACAAAGACTTGAATTCATCGATTTTTCTTCTGTCAAACATCTGTAATTTGATTTCGATCGGGCTCGATTCAACAAATTTTGTTTTGTGGAAATTTCAACTCATGGCTATTCTAAAAGCTCACAAGCTTTTTGGTTTTATTGATGGATTGAAACCACCTCCAAAGAAATTTCTTCCTTCCACAAAATCTGGATCTGAATCGTCATCTCAATCTATTAATCCCGCCTATGAAGATTGGATTGCACGCGATCAAGCTCTTATGACGCTAATAAATGCTACTTTATCTCCATCTGCCCTAGCATACGTTGTCGGTAGTACCTCTCCGAAGGAAATTTGGGACACTCTGGAGAAGCATTATTCATCAAGCTCACGCACCAATGTTGTTAACCTCAAATCTGATCTTCAATCCATATCCAAGAAAGTCGGTGAGTCTATTGATGATTATGTAAAACGTATTAAGGAGGTTAAGGACAAATTAGCAAATGTCTCTGTAGTTGTTGATGATGAGGATCTGTTGATTTACACTTTGAATGGTTTACCGTCTGAGTATAATGTCTTTCGCACATCTATGGGTACTCGGTCTCAATCCGTTACTTTTGATGAACTCCATGTTCTTATGAAATCGGAGGAAGTTGCTTTGGACAAGCAGGTGAAACGAGATGATTTGTTTTCTCAAAATACTGCTCTATTTACTGTTCCGAATCCATCTCGCACGGCTCCTGTTTATAACTCAAATAGCTCTCGCGATAAAGGAAATCAGGGTCGTGGTCGTAATATTGGAAATCAAGGCCGTGGTCAATTTTATAAATCACTCTTTCGTAGTGATGGAGGGGGTGAGTTTATAAATGACTCTTTTCGTTCCTATCTCAATTCTCGTGGCATTCTTCATAAAAAATAATGTGCTTACACACCCGAACAAAATGGTGTGGCTGAATGCAAACACCGTCACATTGTTGAAATGGCCATTTCCCTAATGACTAAAGCTTCTATTCCTATTAAGTTCTGGTCATTTGCCTTCGCTGCTGCTGTATTCCTTATAAATCGTTTACCATCTCCTTCCTTAGCTCATAAATCTCCTTTTGAGTGTCTCTTTCGTCGACTCCCTAATTATTCTCATCTTAAAACATTCGGTTGCGCCTGCTATCCTATTTTAAAGCCATACAATTCACATAAACTTCTACCCAAAACATCGAAGTGTGTCTTTCTCGGTTATCCCTTAGATTATAAGGGTTATTTGTGCTACAACATGAGCTCTCACAAGTTCTATACCTCTAGACATGTTCCTTTTGATGAATCTTATTTTCCTTTCTCTACTGCTACTTCTTTTTCCCGTTCTTCTCCTTCTCCTATTTTACCTCTTCTCTTGTCTACTTTATCATCTCTGTCTAGCCCTTCCACGGTTTCATCATCTTCTTCTACTACCTCTCCCTTAGATTCTTCCACTGCCTCTGATTCTGATTTCTCTACTCATACTCCAACTACTGATTTAGGGTTGTCTTGTACACATCCACCAGCACCAGTTTCTCTGGTTGATGCATCACATACTGTACAATCTGTTGCTCATGGTTCTGCTGGTATTTCTTCCTCTGTTGTTGACATGAATACACCAACACCAACACCTATTCCTAGTTGTGTTCCACAATCCACAAATATCCATCCAATGGAAACTAGAGGCAAATCAGGGATATCTAAAAAGAAGGTTTTTGTTGCTTAA

mRNA sequence

ATGGCTTCCCTTCAACTTGACAAAGACTTGAATTCATCGATTTTTCTTCTGTCAAACATCTGTAATTTGATTTCGATCGGGCTCGATTCAACAAATTTTGTTTTGTGGAAATTTCAACTCATGGCTATTCTAAAAGCTCACAAGCTTTTTGGTTTTATTGATGGATTGAAACCACCTCCAAAGAAATTTCTTCCTTCCACAAAATCTGGATCTGAATCGTCATCTCAATCTATTAATCCCGCCTATGAAGATTGGATTGCACGCGATCAAGCTCTTATGACGCTAATAAATGCTACTTTATCTCCATCTGCCCTAGCATACGTTGTCGGTAGTACCTCTCCGAAGGAAATTTGGGACACTCTGGAGAAGCATTATTCATCAAGCTCACGCACCAATGTTGTTAACCTCAAATCTGATCTTCAATCCATATCCAAGAAAGTCGGTGAGTCTATTGATGATTATGTAAAACGTATTAAGGAGGTTAAGGACAAATTAGCAAATGTCTCTGTAGTTGTTGATGATGAGGATCTGTTGATTTACACTTTGAATGGTTTACCGTCTGAGTATAATGTCTTTCGCACATCTATGGGTACTCGGTCTCAATCCGTTACTTTTGATGAACTCCATGTTCTTATGAAATCGGAGGAAGTTGCTTTGGACAAGCAGGTGAAACGAGATGATTTGTTTTCTCAAAATACTGCTCTATTTACTGTTCCGAATCCATCTCGCACGGCTCCTGTTTATAACTCAAATAGCTCTCGCGATAAAGGAAATCAGGGTCGTGGTCGTAATATTGGAAATCAAGGCCGTGATTCTTCCACTGCCTCTGATTCTGATTTCTCTACTCATACTCCAACTACTGATTTAGGGTTGTCTTGTACACATCCACCAGCACCAGTTTCTCTGGTTGATGCATCACATACTGTACAATCTGTTGCTCATGGTTCTGCTGGTATTTCTTCCTCTGTTGTTGACATGAATACACCAACACCAACACCTATTCCTAGTTGTGTTCCACAATCCACAAATATCCATCCAATGGAAACTAGAGGCAAATCAGGGATATCTAAAAAGAAGGTTTTTGTTGCTTAA

Coding sequence (CDS)

ATGGCTTCCCTTCAACTTGACAAAGACTTGAATTCATCGATTTTTCTTCTGTCAAACATCTGTAATTTGATTTCGATCGGGCTCGATTCAACAAATTTTGTTTTGTGGAAATTTCAACTCATGGCTATTCTAAAAGCTCACAAGCTTTTTGGTTTTATTGATGGATTGAAACCACCTCCAAAGAAATTTCTTCCTTCCACAAAATCTGGATCTGAATCGTCATCTCAATCTATTAATCCCGCCTATGAAGATTGGATTGCACGCGATCAAGCTCTTATGACGCTAATAAATGCTACTTTATCTCCATCTGCCCTAGCATACGTTGTCGGTAGTACCTCTCCGAAGGAAATTTGGGACACTCTGGAGAAGCATTATTCATCAAGCTCACGCACCAATGTTGTTAACCTCAAATCTGATCTTCAATCCATATCCAAGAAAGTCGGTGAGTCTATTGATGATTATGTAAAACGTATTAAGGAGGTTAAGGACAAATTAGCAAATGTCTCTGTAGTTGTTGATGATGAGGATCTGTTGATTTACACTTTGAATGGTTTACCGTCTGAGTATAATGTCTTTCGCACATCTATGGGTACTCGGTCTCAATCCGTTACTTTTGATGAACTCCATGTTCTTATGAAATCGGAGGAAGTTGCTTTGGACAAGCAGGTGAAACGAGATGATTTGTTTTCTCAAAATACTGCTCTATTTACTGTTCCGAATCCATCTCGCACGGCTCCTGTTTATAACTCAAATAGCTCTCGCGATAAAGGAAATCAGGGTCGTGGTCGTAATATTGGAAATCAAGGCCGTGATTCTTCCACTGCCTCTGATTCTGATTTCTCTACTCATACTCCAACTACTGATTTAGGGTTGTCTTGTACACATCCACCAGCACCAGTTTCTCTGGTTGATGCATCACATACTGTACAATCTGTTGCTCATGGTTCTGCTGGTATTTCTTCCTCTGTTGTTGACATGAATACACCAACACCAACACCTATTCCTAGTTGTGTTCCACAATCCACAAATATCCATCCAATGGAAACTAGAGGCAAATCAGGGATATCTAAAAAGAAGGTTTTTGTTGCTTAA

Protein sequence

MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPKKFLPSTKSGSESSSQSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVYNSNSSRDKGNQGRGRNIGNQGRDSSTASDSDFSTHTPTTDLGLSCTHPPAPVSLVDASHTVQSVAHGSAGISSSVVDMNTPTPTPIPSCVPQSTNIHPMETRGKSGISKKKVFVA
Homology
BLAST of Moc11g30750 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 310.8 bits (795), Expect = 1.5e-80
Identity = 178/292 (60.96%), Postives = 213/292 (72.95%), Query Frame = 0

Query: 2   ASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPK 61
           +S    KDL+S IFLLSNICNL+SI LDST+F+LWKFQL AILKAHKLFGFIDG    P 
Sbjct: 25  SSTNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPS 84

Query: 62  KFLPSTKSGSESSSQS--------INPAYEDWIARDQALMTLINATLSPSALAYVVGSTS 121
           +FL S+   SE+ SQ         INP +EDWIA+DQALMTLINATLS  ALAYVV S +
Sbjct: 85  QFLASS---SETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGT 144

Query: 122 PKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVD 181
            K++W+ LEKHYSS+SRTNVVNLKSDLQSI KK  ESID YVKRIKE+KDK ANVS+ ++
Sbjct: 145 SKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITIN 204

Query: 182 DEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNT 241
           DE LLIY LNGL +EYN   TSM TR+QSV+F+ELHV MKSEE A++KQ+KR+DL +Q  
Sbjct: 205 DEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPN 264

Query: 242 ALF-TVPNPSRTAPVYNSNSSRDKG---NQGRGR-----NIGNQGRDSSTAS 277
           ALF + P        ++ N S D+G   N GRG+        NQGR  S+ +
Sbjct: 265 ALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGN 313

BLAST of Moc11g30750 vs. NCBI nr
Match: XP_022157455.1 (uncharacterized protein LOC111024149 [Momordica charantia])

HSP 1 Score: 310.1 bits (793), Expect = 2.6e-80
Identity = 165/178 (92.70%), Postives = 166/178 (93.26%), Query Frame = 0

Query: 93  MTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESID 152
           MTLINATLSPSA AYVVGSTS KEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGE ID
Sbjct: 1   MTLINATLSPSAPAYVVGSTSSKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGECID 60

Query: 153 DYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLM 212
           DYVKRIKEVKDKL NVSVVVDDEDLLIYTLNGLPS YNVFRTSM TRSQSVTFDELHVLM
Sbjct: 61  DYVKRIKEVKDKLTNVSVVVDDEDLLIYTLNGLPSAYNVFRTSMRTRSQSVTFDELHVLM 120

Query: 213 KSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVYNSNSSRDKGNQGRGRNIGNQGR 271
           KSEEVALD+QVKRDDLFSQNTALF VPNPS  APVYNSNSSR KGNQG GR IGNQGR
Sbjct: 121 KSEEVALDRQVKRDDLFSQNTALFAVPNPSHMAPVYNSNSSRGKGNQGHGRTIGNQGR 178

BLAST of Moc11g30750 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-78
Identity = 181/297 (60.94%), Postives = 213/297 (71.72%), Query Frame = 0

Query: 1   MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
           + S   +KD  S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKLFGF+DG  P P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLFGFVDGTNPCP 66

Query: 61  KKFLPSTKSGSESSSQSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDT 120
           +   PST S   +     NP YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++WD 
Sbjct: 67  QT-SPSTTS---TVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDV 126

Query: 121 LEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIY 180
           L K YSS SR+NVVNLKSDLQ+I KK  ESID Y+KRIKE+KDKLANVS  +++EDLLIY
Sbjct: 127 LAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIY 186

Query: 181 TLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPN 240
            LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +   
Sbjct: 187 ALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQ 246

Query: 241 PSRT-APVYNSNSSRDKGNQGRGRNIGNQGR---DSSTASDSDFSTHTPTTDLGLSC 294
              + AP +N+N  R  GN G G+N G+ GR   D+ T          P  D   +C
Sbjct: 247 SLLSCAPTFNNNFVR--GN-GHGKNYGH-GRFSFDAQTRGHGLSQEQKPVHDNHATC 295

BLAST of Moc11g30750 vs. NCBI nr
Match: XP_011658579.1 (uncharacterized protein LOC105436058 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-78
Identity = 181/297 (60.94%), Postives = 213/297 (71.72%), Query Frame = 0

Query: 1   MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
           + S   +KD  S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKLFGF+DG  P P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLFGFVDGTNPCP 66

Query: 61  KKFLPSTKSGSESSSQSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDT 120
           +   PST S   +     NP YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++WD 
Sbjct: 67  QT-SPSTTS---TVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDV 126

Query: 121 LEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIY 180
           L K YSS SR+NVVNLKSDLQ+I KK  ESID Y+KRIKE+KDKLANVS  +++EDLLIY
Sbjct: 127 LAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIY 186

Query: 181 TLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPN 240
            LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L +   
Sbjct: 187 ALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQ 246

Query: 241 PSRT-APVYNSNSSRDKGNQGRGRNIGNQGR---DSSTASDSDFSTHTPTTDLGLSC 294
              + AP +N+N  R  GN G G+N G+ GR   D+ T          P  D   +C
Sbjct: 247 SLLSCAPTFNNNFVR--GN-GHGKNYGH-GRFSFDAQTRGHGLSQEQKPVHDNHATC 295

BLAST of Moc11g30750 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 4.1e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0

Query: 1   MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
           + S   +KD  S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG  P P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 61  KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
               P T + S +S+     NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67  ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
           D L K YSS SR+NVVNLKSDLQ+I KK  ESID Y+KRIKE+KDKLANVS  +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
           IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L + 
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
                + AP +++N  R  G   + G GR   +   +G  SS    S    H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294

BLAST of Moc11g30750 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-07
Identity = 33/114 (28.95%), Postives = 56/114 (49.12%), Query Frame = 0

Query: 83  EDWIARDQALMTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQS 142
           EDW   D+   + I   LS   +  ++   + + IW  LE  Y S + TN + LK  L +
Sbjct: 50  EDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYA 109

Query: 143 ISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSM 197
           +    G +   ++     +  +LAN+ V +++ED  I  LN LPS Y+   T++
Sbjct: 110 LHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTI 163

BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 7.3e-81
Identity = 178/292 (60.96%), Postives = 213/292 (72.95%), Query Frame = 0

Query: 2   ASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPK 61
           +S    KDL+S IFLLSNICNL+SI LDST+F+LWKFQL AILKAHKLFGFIDG    P 
Sbjct: 25  SSTNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPS 84

Query: 62  KFLPSTKSGSESSSQS--------INPAYEDWIARDQALMTLINATLSPSALAYVVGSTS 121
           +FL S+   SE+ SQ         INP +EDWIA+DQALMTLINATLS  ALAYVV S +
Sbjct: 85  QFLASS---SETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGT 144

Query: 122 PKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVD 181
            K++W+ LEKHYSS+SRTNVVNLKSDLQSI KK  ESID YVKRIKE+KDK ANVS+ ++
Sbjct: 145 SKQVWEVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITIN 204

Query: 182 DEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNT 241
           DE LLIY LNGL +EYN   TSM TR+QSV+F+ELHV MKSEE A++KQ+KR+DL +Q  
Sbjct: 205 DEYLLIYALNGLSTEYNTLSTSMRTRAQSVSFEELHVFMKSEESAIEKQMKREDLVTQPN 264

Query: 242 ALF-TVPNPSRTAPVYNSNSSRDKG---NQGRGR-----NIGNQGRDSSTAS 277
           ALF + P        ++ N S D+G   N GRG+        NQGR  S+ +
Sbjct: 265 ALFASSPQSQNRTSAFHPNQSHDRGRGKNNGRGKANFAPTFTNQGRGRSSGN 313

BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match: A0A6J1DT57 (uncharacterized protein LOC111024149 OS=Momordica charantia OX=3673 GN=LOC111024149 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 165/178 (92.70%), Postives = 166/178 (93.26%), Query Frame = 0

Query: 93  MTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGESID 152
           MTLINATLSPSA AYVVGSTS KEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGE ID
Sbjct: 1   MTLINATLSPSAPAYVVGSTSSKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVGECID 60

Query: 153 DYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLM 212
           DYVKRIKEVKDKL NVSVVVDDEDLLIYTLNGLPS YNVFRTSM TRSQSVTFDELHVLM
Sbjct: 61  DYVKRIKEVKDKLTNVSVVVDDEDLLIYTLNGLPSAYNVFRTSMRTRSQSVTFDELHVLM 120

Query: 213 KSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVYNSNSSRDKGNQGRGRNIGNQGR 271
           KSEEVALD+QVKRDDLFSQNTALF VPNPS  APVYNSNSSR KGNQG GR IGNQGR
Sbjct: 121 KSEEVALDRQVKRDDLFSQNTALFAVPNPSHMAPVYNSNSSRGKGNQGHGRTIGNQGR 178

BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0

Query: 1   MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
           + S   +KD  S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG  P P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 61  KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
               P T + S +S+     NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67  ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
           D L K YSS SR+NVVNLKSDLQ+I KK  ESID Y+KRIKE+KDKLANVS  +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
           IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L + 
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
                + AP +++N  R  G   + G GR   +   +G  SS    S    H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294

BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0

Query: 1   MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
           + S   +KD  S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG  P P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 61  KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
               P T + S +S+     NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67  ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
           D L K YSS SR+NVVNLKSDLQ+I KK  ESID Y+KRIKE+KDKLANVS  +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
           IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L + 
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
                + AP +++N  R  G   + G GR   +   +G  SS    S    H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294

BLAST of Moc11g30750 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.0e-78
Identity = 176/292 (60.27%), Postives = 210/292 (71.92%), Query Frame = 0

Query: 1   MASLQLDKDLNSSIFLLSNICNLISIGLDSTNFVLWKFQLMAILKAHKLFGFIDGLKPPP 60
           + S   +KD  S IFLLSNICNLIS+ LDSTNFVLWKFQL AILKAHKL+GFIDG  P P
Sbjct: 7   LPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDGTNPCP 66

Query: 61  KKFLPSTKSGSESSS--QSINPAYEDWIARDQALMTLINATLSPSALAYVVGSTSPKEIW 120
               P T + S +S+     NP+YEDWIA+DQALMT+INATLSP ALAYVVGSTS K++W
Sbjct: 67  ----PRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVW 126

Query: 121 DTLEKHYSSSSRTNVVNLKSDLQSISKKVGESIDDYVKRIKEVKDKLANVSVVVDDEDLL 180
           D L K YSS SR+NVVNLKSDLQ+I KK  ESID Y+KRIKE+KDKLANVS  +++EDLL
Sbjct: 127 DVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLL 186

Query: 181 IYTLNGLPSEYNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTV 240
           IY LNGLP+EYN FRTSM TRSQ VTF+ELHVL+++EE AL KQ K DD ++Q T L + 
Sbjct: 187 IYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLSS 246

Query: 241 PNPSRT-APVYNSNSSRDKG---NQGRGR---NIGNQGRDSSTASDSDFSTH 284
                + AP +++N  R  G   + G GR   +   +G  SS    S    H
Sbjct: 247 SQSLLSCAPTFDNNFVRGNGHGKHYGHGRFSFDAQTRGHGSSPEQKSVHDNH 294

BLAST of Moc11g30750 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 3.8e-13
Identity = 74/272 (27.21%), Postives = 131/272 (48.16%), Query Frame = 0

Query: 14  IFLLSNICNLISIGLD--STNFVLWKFQLMAILKAHKLFGFIDGLKPPPKKFLPSTKSGS 73
           I+ +SNI + I + LD   +N+  W+   +    +  + G IDG   P            
Sbjct: 10  IYGVSNIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLP------------ 69

Query: 74  ESSSQSINPAYEDWIARDQALMTLINATLSPSAL--AYVVGSTSPKEIWDTLEKHYSSSS 133
            +++  +N     W  RD  +   +  TL+P     ++V  STS ++IW  ++  + ++ 
Sbjct: 70  -TNANDVN-----WQKRDGIVKLSLYGTLTPKQFQGSFVTSSTS-RDIWLRIKNQFRNNK 129

Query: 134 RTNVVNLKSDLQSISKKVGE-SIDDYVKRIKEVKDKLANVSVVVDDEDLLIYTLNGLPSE 193
               + L S+L+  +K +G+  + DY +++K++ D L NV V V D +L++Y LNGL  +
Sbjct: 130 DARALRLDSELR--TKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPK 189

Query: 194 YNVFRTSMGTRSQSVTFDELHVLMKSEEVALDKQVKRDDLFSQNTALFTVPNPSRTAPVY 253
           ++     +  R    +FD+   +++ EE  L + +K +     +++  TV   S   PV 
Sbjct: 190 FDNIINVIKHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPV- 249

Query: 254 NSNSSRDKGNQ------GRGRNI--GNQGRDS 273
            +N  R  GNQ      GRG NI  G  GR S
Sbjct: 250 -TNFQRSGGNQMGYRGRGRGNNIFRGRGGRFS 258

BLAST of Moc11g30750 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 3.4e-06
Identity = 31/143 (21.68%), Postives = 68/143 (47.55%), Query Frame = 0

Query: 29  DSTNFVLWKFQLMAILKAHKLFGFIDGLKPPPKKFLPSTKSGSESSSQSINPAYEDWIAR 88
           D  N+V WK +  + L+  K FGFIDG  P P  F               +P Y+ W   
Sbjct: 38  DEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPF---------------SPLYQPWEQC 97

Query: 89  DQALMTLINATLSPSALAYVVGSTSPKEIWDTLEKHYSSSSRTNVVNLKSDLQSISKKVG 148
           +  +M  +  +++   L  V+ + +  ++W+ L + +       +  L+  L ++ ++ G
Sbjct: 98  NAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATL-RQGG 157

Query: 149 ESIDDYVKRIKEVKDKLANVSVV 172
           +S+++Y  ++ +V  +L+  + +
Sbjct: 158 DSVEEYFGKLSKVWMELSEYAPI 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150845.11.5e-8060.96uncharacterized protein LOC111018892 [Momordica charantia][more]
XP_022157455.12.6e-8092.70uncharacterized protein LOC111024149 [Momordica charantia][more]
KAE8645659.11.8e-7860.94hypothetical protein Csa_020439 [Cucumis sativus][more]
XP_011658579.11.8e-7860.94uncharacterized protein LOC105436058 [Cucumis sativus][more]
XP_008448007.14.1e-7860.27PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
P109783.9e-0728.95Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A6J1D9L67.3e-8160.96uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DT571.2e-8092.70uncharacterized protein LOC111024149 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5D3CLI62.0e-7860.27T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=... [more]
A0A1S3BI582.0e-7860.27uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S4DWT92.0e-7860.27uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
AT1G34070.13.8e-1327.21CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G21280.13.4e-0621.68CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 22..61
e-value: 2.1E-8
score: 33.8
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 85..217
e-value: 1.8E-26
score: 92.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..291
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 16..262
NoneNo IPR availablePANTHERPTHR47481:SF3GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATEDcoord: 16..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g30750.1Moc11g30750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding