Moc11g30600 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g30600
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 22357999 .. 22358637 (+)
RNA-Seq ExpressionMoc11g30600
SyntenyMoc11g30600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTACCATGCCACTTGTGTCCACAGCTGTAGCAAAACTCAAACCCACACCTACACTTGATATGTGGACAGCCTTCAGTCCTCTCCACATAAATCTTGCAATGAGGACATCTCTTCCAGTTCTTGCGCCCAGCGAGCTGCATGGTCAAGAAATCATCGATTCCCCCTGCCTCTTTGCACAGCCTCTGAAACTCCTCGCATTTCACTTCCCCATGCCACGCCACCTCGCACTGCGCGCAGAACATTCTGTGGCAGCAGGGACACTCCGCCGCCGTCACCGCCACCGCCGCCGCCTCGTCGATGATCGTCGCCGAGCAGTCCACGAAGGGGCAGAGGATGAGTTTGTGCATCCCCAGGATCATGGTCTCGCACAGGGCGTCTCCCCAGCGCTCCAGCGCCTCTTTGGAGAGGAAATAACTGCATGTTTGTGGCTCCAGCGCCGCGTCGCAGTTTGGCTCTGGACACGTCACTTTGGCCACGTTGTTCTCGAGTTTTGCGGCGATGTGGCTCGCAATGCAATCGGTGCAGAAGGAGTGGGAGCAGCCGCTGCCGGTGAACATGTCGGCGGCGGCTTTGGCATCCGTACAGATGGTGCACGTGGTTTTGGAAGCAGAGGATTCGCCTTTGGACATTATTGA

mRNA sequence

ATGGTTACCATGCCACTTGTGTCCACAGCTGTAGCAAAACTCAAACCCACACCTACACTTGATATGTGGACAGCCTTCAGTCCTCTCCACATAAATCTTGCAATGAGGACATCTCTTCCAGTTCTTGCGCCCAGCGAGCTGCATGGTCAAGAAATCATCGATTCCCCCTGCCTCTTTGCACAGCCTCTGAAACTCCTCGCATTTCACTTCCCCATGCCACGCCACCTCGCACTGCGCGCAGAACATTCTGTGGCAGCAGGGACACTCCGCCGCCGTCACCGCCACCGCCGCCGCCTCGTCGATGATCGTCGCCGAGCAGTCCACGAAGGGGCAGAGGATGAGTTTGTGCATCCCCAGGATCATGGTCTCGCACAGGGCGTCTCCCCAGCGCTCCAGCGCCTCTTTGGAGAGGAAATAACTGCATGTTTGTGGCTCCAGCGCCGCGTCGCAGTTTGGCTCTGGACACGTCACTTTGGCCACGTTGTTCTCGAGTTTTGCGGCGATGTGGCTCGCAATGCAATCGGTGCAGAAGGAGTGGGAGCAGCCGCTGCCGGTGAACATGTCGGCGGCGGCTTTGGCATCCGTACAGATGGTGCACGTGGTTTTGGAAGCAGAGGATTCGCCTTTGGACATTATTGA

Coding sequence (CDS)

ATGGTTACCATGCCACTTGTGTCCACAGCTGTAGCAAAACTCAAACCCACACCTACACTTGATATGTGGACAGCCTTCAGTCCTCTCCACATAAATCTTGCAATGAGGACATCTCTTCCAGTTCTTGCGCCCAGCGAGCTGCATGGTCAAGAAATCATCGATTCCCCCTGCCTCTTTGCACAGCCTCTGAAACTCCTCGCATTTCACTTCCCCATGCCACGCCACCTCGCACTGCGCGCAGAACATTCTGTGGCAGCAGGGACACTCCGCCGCCGTCACCGCCACCGCCGCCGCCTCGTCGATGATCGTCGCCGAGCAGTCCACGAAGGGGCAGAGGATGAGTTTGTGCATCCCCAGGATCATGGTCTCGCACAGGGCGTCTCCCCAGCGCTCCAGCGCCTCTTTGGAGAGGAAATAACTGCATGTTTGTGGCTCCAGCGCCGCGTCGCAGTTTGGCTCTGGACACGTCACTTTGGCCACGTTGTTCTCGAGTTTTGCGGCGATGTGGCTCGCAATGCAATCGGTGCAGAAGGAGTGGGAGCAGCCGCTGCCGGTGAACATGTCGGCGGCGGCTTTGGCATCCGTACAGATGGTGCACGTGGTTTTGGAAGCAGAGGATTCGCCTTTGGACATTATTGA

Protein sequence

MVTMPLVSTAVAKLKPTPTLDMWTAFSPLHINLAMRTSLPVLAPSELHGQEIIDSPCLFAQPLKLLAFHFPMPRHLALRAEHSVAAGTLRRRHRHRRRLVDDRRRAVHEGAEDEFVHPQDHGLAQGVSPALQRLFGEEITACLWLQRRVAVWLWTRHFGHVVLEFCGDVARNAIGAEGVGAAAAGEHVGGGFGIRTDGARGFGSRGFAFGHY
Homology
[Close]
BLAST of Moc11g30600 vs. NCBI nr
Match: KAG5537354.1 (hypothetical protein RHGRI_024710 [Rhododendron griersonianum])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-06
Identity = 71/200 (35.50%), Postives = 91/200 (45.50%), Query Frame = 0 

Query: 22  MWTAFSPLHINLAMRTSLPVLAPSELHGQEIIDSPCLFAQPLKLLAFHFPMPRHLALRAE 81
           M T FS L+I LAMR   P LA   L  Q+I+    +F Q  KLLA +  MP H+  RAE
Sbjct: 1   MQTPFSFLNIKLAMRAPHPALALGHLPHQQILPPSLIFVQLPKLLAPNPRMPPHVTTRAE 60

Query: 82  HSVAAGTLRRR------HRHRRRLVDDRR----RAVHEGAEDEFVHPQDHGLAQGVSPAL 141
             +    L  R      H H RR V +R     R  ++      V P+ H         +
Sbjct: 61  QPMTHRALALRDQNPFLHHHHRRAVLERAVKLLRRRYKRLAQHLVPPRRH---------V 120

Query: 142 QRLFGEEITACLWLQRRVAVWLWTRHFGHVVLEFCGDVARNAIGAEGVGAAAAGEHVGGG 201
           +R  G ++     L+R  AV         V L+  GDV  +A+GAEGVGA    EHV G 
Sbjct: 121 RRDDGPDVDE---LERAAAVEAGAGDQSGVGLDPGGDVLGHAVGAEGVGAGFDEEHVAGV 180

Query: 202 FGIRTDGARGFGS-RGFAFG 211
           F +  D A G G   GF  G
Sbjct: 181 FLVGADFAEGGGGLAGFGGG 188

The following BLAST results are available for this feature:
BLAST of Moc11g30600 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5537354.11.1e-0635.50hypothetical protein RHGRI_024710 [Rhododendron griersonianum][more]
BLAST of Moc11g30600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g30600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g30600 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g30600.1Moc11g30600.1mRNA