Moc11g30040 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g30040
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820
Locationchr11: 21985027 .. 21985722 (-)
RNA-Seq ExpressionMoc11g30040
SyntenyMoc11g30040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGAAGAAGAAGAAGAAGACGGGTCTCGACAGAATCAGCCTCCTACCAGATTCTCTTCTCCATTCCATTCTATCCTTGTTAAATACAAGGCAAGTTGTGCAGACTTGTGTTCTATCAAAAAGATGGAAGACCCTTTGGACTGACATTCCCACACTCAACTTTGATTTCGACTCCTACCCATTTAAACAGTCAATCAGAAATAGCAGTGCTTCTAATCCAAAAGAACCATCGTTTGAGCGCTTCATCTTGAGAGTTTTATCTGAACATGGATGCAAAAATATTATAACATTGAATTTCTCTTGCTCAAGGGATTCTGACGATACGGTGTCGTTAATAGAATGGTTGATATGCTACGCTAGTCACGTGGTTCAAGAACTTTGCATCAGTACCTATAAAACTATTTACTATAATTGGCCATGTGGTTTATCAACATGTTCATCACTCCTTGTGCTGAAGATTAAATGTGGGTTCGTTGATGACTGTGGAGCCTTGAAATCAGCATCGTTGAGAATTTTAGAGATTGAATGTGATTGGGGGGATCGGTATGACCGTAAATACAATGAAATTGAGATGTTCTCTGGTTGTCCAAATTTGGAATCTTTGGTTTTGGTTAATTATCTTTTTGACAGTGCTACTATTTCTGCTCCAAAACTTGAGAATTTGGAATTATGTGCTTCTTCCACAAGTTGA

mRNA sequence

ATGTCGTCGAAGAAGAAGAAGAAGACGGGTCTCGACAGAATCAGCCTCCTACCAGATTCTCTTCTCCATTCCATTCTATCCTTGTTAAATACAAGGCAAGTTGTGCAGACTTGTGTTCTATCAAAAAGATGGAAGACCCTTTGGACTGACATTCCCACACTCAACTTTGATTTCGACTCCTACCCATTTAAACAGTCAATCAGAAATAGCAGTGCTTCTAATCCAAAAGAACCATCGTTTGAGCGCTTCATCTTGAGAGTTTTATCTGAACATGGATGCAAAAATATTATAACATTGAATTTCTCTTGCTCAAGGGATTCTGACGATACGGTGTCGTTAATAGAATGGTTGATATGCTACGCTAGTCACGTGGTTCAAGAACTTTGCATCAGTACCTATAAAACTATTTACTATAATTGGCCATGTGGTTTATCAACATGTTCATCACTCCTTGTGCTGAAGATTAAATGTGGGTTCGTTGATGACTGTGGAGCCTTGAAATCAGCATCGTTGAGAATTTTAGAGATTGAATGTGATTGGGGGGATCGGTATGACCGTAAATACAATGAAATTGAGATGTTCTCTGGTTGTCCAAATTTGGAATCTTTGGTTTTGGTTAATTATCTTTTTGACAGTGCTACTATTTCTGCTCCAAAACTTGAGAATTTGGAATTATGTGCTTCTTCCACAAGTTGA

Coding sequence (CDS)

ATGTCGTCGAAGAAGAAGAAGAAGACGGGTCTCGACAGAATCAGCCTCCTACCAGATTCTCTTCTCCATTCCATTCTATCCTTGTTAAATACAAGGCAAGTTGTGCAGACTTGTGTTCTATCAAAAAGATGGAAGACCCTTTGGACTGACATTCCCACACTCAACTTTGATTTCGACTCCTACCCATTTAAACAGTCAATCAGAAATAGCAGTGCTTCTAATCCAAAAGAACCATCGTTTGAGCGCTTCATCTTGAGAGTTTTATCTGAACATGGATGCAAAAATATTATAACATTGAATTTCTCTTGCTCAAGGGATTCTGACGATACGGTGTCGTTAATAGAATGGTTGATATGCTACGCTAGTCACGTGGTTCAAGAACTTTGCATCAGTACCTATAAAACTATTTACTATAATTGGCCATGTGGTTTATCAACATGTTCATCACTCCTTGTGCTGAAGATTAAATGTGGGTTCGTTGATGACTGTGGAGCCTTGAAATCAGCATCGTTGAGAATTTTAGAGATTGAATGTGATTGGGGGGATCGGTATGACCGTAAATACAATGAAATTGAGATGTTCTCTGGTTGTCCAAATTTGGAATCTTTGGTTTTGGTTAATTATCTTTTTGACAGTGCTACTATTTCTGCTCCAAAACTTGAGAATTTGGAATTATGTGCTTCTTCCACAAGTTGA

Protein sequence

MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCASSTS
Homology
BLAST of Moc11g30040 vs. NCBI nr
Match: XP_022141765.1 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [Momordica charantia])

HSP 1 Score: 466.8 bits (1200), Expect = 1.0e-127
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS 60
           MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS
Sbjct: 1   MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS 60

Query: 61  YPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICY 120
           YPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICY
Sbjct: 61  YPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICY 120

Query: 121 ASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDW 180
           ASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDW
Sbjct: 121 ASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDW 180

Query: 181 GDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
           GDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS
Sbjct: 181 GDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 228

BLAST of Moc11g30040 vs. NCBI nr
Match: XP_038890214.1 (F-box/LRR-repeat protein At3g26922-like [Benincasa hispida])

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-61
Identity = 135/220 (61.36%), Postives = 161/220 (73.18%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPD LLH ILS LNT+ VVQTCVLSKRWKTLWT IPTLNFD++SY    S    +
Sbjct: 5   DRISLLPDVLLHHILSTLNTKCVVQTCVLSKRWKTLWTHIPTLNFDYNSYSSSLSSFKDN 64

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               KE SF+ FI RVLS+H   NI  L ++ S++ D+ V L+E+LICYA S  VQ+LCI
Sbjct: 65  DDEAKEKSFKYFIFRVLSKHCTTNIHKLTYTTSQNEDELV-LVEFLICYAGSRNVQQLCI 124

Query: 132 STYKTI-YYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDR-YDRKY 191
           +TY TI  Y+W    S CSSL+ LK+ C FV D G L   SL+ILEIECDW +R  +  Y
Sbjct: 125 NTYDTIGIYDWNYCFSVCSSLIGLKMVCAFVHDWGVLAIPSLKILEIECDWYERDKEANY 184

Query: 192 NEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
             I MF GCPNLESLVLV+YLF+S+TISAPKL+NL+LCAS
Sbjct: 185 KGITMFPGCPNLESLVLVDYLFESSTISAPKLKNLKLCAS 223

BLAST of Moc11g30040 vs. NCBI nr
Match: XP_008459618.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-61
Identity = 132/219 (60.27%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPDSLLH ILS  NT+ VVQTC+LSKRWKTLWT IPTLNFD++S+    S  N  
Sbjct: 17  DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSF-NYD 76

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               K  SF+ FI RVLS+H   +I  L ++ S + D++V L+E LICYA SH VQ+LC+
Sbjct: 77  DEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESV-LVELLICYAGSHNVQQLCV 136

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDR-KYN 191
           +TY    Y W      CSSL+ LK+ CGFVDD G L   SL+ILEI+CDW  R +R  Y+
Sbjct: 137 NTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANYD 196

Query: 192 EIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
            I MFSGCPNLESLVLV+YLF+SATISAP+LEN +LCAS
Sbjct: 197 GITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS 233

BLAST of Moc11g30040 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-61
Identity = 132/219 (60.27%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPDSLLH ILS  NT+ VVQTC+LSKRWKTLWT IPTLNFD++S+    S  N  
Sbjct: 17  DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSF-NYD 76

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               K  SF+ FI RVLS+H   +I  L ++ S + D++V L+E LICYA SH VQ+LC+
Sbjct: 77  DEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESV-LVELLICYAGSHNVQQLCV 136

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDR-KYN 191
           +TY    Y W      CSSL+ LK+ CGFVDD G L   SL+ILEI+CDW  R +R  Y+
Sbjct: 137 NTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANYD 196

Query: 192 EIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
            I MFSGCPNLESLVLV+YLF+SATISAP+LEN +LCAS
Sbjct: 197 GITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS 233

BLAST of Moc11g30040 vs. NCBI nr
Match: KAA0039267.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 8.5e-61
Identity = 132/219 (60.27%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPD+LLH ILS  NT+ VVQTC+LSKRWKTLWT IPTLNFD++S+    S  N  
Sbjct: 17  DRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSF-NYD 76

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               K  SF+ FI RVLS+H   +I  L ++ S + D++V L+E LICYA SH VQ+LCI
Sbjct: 77  DEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESV-LVELLICYAGSHNVQQLCI 136

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDR-KYN 191
           +TY    Y W      CSSL+ LK+ CGFVDD G L   SL+ILEI+CDW  R +R  Y+
Sbjct: 137 NTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANYD 196

Query: 192 EIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
            I MFSGCPNLESLVLV+YLF+SATISAP+LEN +LCAS
Sbjct: 197 GITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS 233

BLAST of Moc11g30040 vs. ExPASy Swiss-Prot
Match: Q9LXJ6 (F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN=At3g52680 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 7.8e-17
Identity = 80/232 (34.48%), Postives = 109/232 (46.98%), Query Frame = 0

Query: 10  GLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS-----YPFK 69
           G DRIS LPD LL  ILS L T  VV T VLSK+W++LW  +P L FD D      Y F 
Sbjct: 19  GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFS 78

Query: 70  QSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHV 129
           + +  S  S+ K P  E F L+            +NF       + V +  W+    S  
Sbjct: 79  EIVCKSFLSH-KAPVLESFRLKF-----------VNF-------NPVDIGLWVGIAFSRH 138

Query: 130 VQELCISTY-----KTIYYNWPCGLSTCSSLLVLK-IKCGFVDDCGALKSASLRILEIEC 189
           ++EL +  Y     K + + +P  L TC++L  LK + C  VD    +   SLR L +E 
Sbjct: 139 LRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEF 198

Query: 190 DWGDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSA-----TISAPKLENLEL 226
               RY  + +   + SGCP LE L L  Y  D +     TI  P L+ L +
Sbjct: 199 ---VRYKDESSVRNLLSGCPGLEELRL--YRGDDSDIKVFTIEVPSLQRLTI 226

BLAST of Moc11g30040 vs. ExPASy Swiss-Prot
Match: Q9FJT1 (Putative FBD-associated F-box protein At5g56820 OS=Arabidopsis thaliana OX=3702 GN=At5g56820 PE=4 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 3.9e-16
Identity = 69/229 (30.13%), Postives = 107/229 (46.72%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRIS LPD LL  ILS ++T   + T +LSKRWK +W  +PTL+ D DS     ++R   
Sbjct: 15  DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLDEDSCRNIGTLR--- 74

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHVVQELCIS 131
                   F+      L  H    + +LN      S D    I+ L+     ++ E+ I+
Sbjct: 75  --------FDEGCCMFLKSHEAPVLTSLNLKLMTPSHD----IDRLLSNIKPILHEITIT 134

Query: 132 TYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCG------ALKSASLRILEIECDWGDRYD 191
           +Y+     +P  L+ C +L+V+K++   + D        +LKS  L  ++  C       
Sbjct: 135 SYRYSTIRFPRNLNVCQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRVKYSC------- 194

Query: 192 RKYNEIEMFSGCPNLESLVL----VNY-LFDSATISAPKLENLELCASS 230
            + +   + S CP LE L L    V+Y   +S TI  P L+ L +C  S
Sbjct: 195 -RESFTTLLSACPVLEDLDLFIGRVHYDCLNSFTIWVPSLQRLSICDES 220

BLAST of Moc11g30040 vs. ExPASy Swiss-Prot
Match: Q9LQM1 (Probable FBD-associated F-box protein At1g32375 OS=Arabidopsis thaliana OX=3702 GN=At1g32375 PE=4 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 72/224 (32.14%), Postives = 108/224 (48.21%), Query Frame = 0

Query: 11  LDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNS 70
           +D++S LP++LL  ILSLL+ + VV T VLSKRW+ LW  +P L +D DSY   Q+I   
Sbjct: 1   MDKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYD-DSY---QAIEYG 60

Query: 71  SASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHVVQELCI 130
                   SF RF+ R  + H  + + TL+F   + S  T  +  W+       ++EL I
Sbjct: 61  --------SFSRFVDRSFTLHDAQVLDTLHFKLGKTSCGTGDIRVWIKTAEKSCLRELII 120

Query: 131 STYKTIYYN----WPCGLSTCSSLLV-LKI-KCGFVDDCGALKSASLRILEIECDWGDRY 190
              K+   N     P  L TC  +LV LK+     VD   +    SL+ L +        
Sbjct: 121 EIDKSNSDNSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSL-------V 180

Query: 191 DRKYNEIE----MFSGCPNLESLVLVNYLFDSATISAPKLENLE 225
             K+   E    + S CP LE LV+    +D+ T    ++ +L+
Sbjct: 181 SMKFPGDELIKMLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLK 205

BLAST of Moc11g30040 vs. ExPASy Swiss-Prot
Match: Q9LXJ7 (FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana OX=3702 GN=At3g52670 PE=4 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 65/219 (29.68%), Postives = 106/219 (48.40%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DR++ LP+ L+  ILS L T  V+ T VLSK+W++LW  +P L FD D Y          
Sbjct: 10  DRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFDSDDY---------- 69

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWL-ICYASHVVQELCI 131
               +  +F   + +         + +L+ S  R S + V +  W+ I +A H ++EL +
Sbjct: 70  --ESEHYTFSEIVCKSFLSLKAPVLKSLHLS-FRKSVNPVDIGLWIGIAFARH-LRELVL 129

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGF-VDDCGALKSASLRILEIECDWGDRYDRKYN 191
                  + +P  L  C++L  LK+  G  VD    +   SLR L ++      Y  + +
Sbjct: 130 YVAPKQTFTFPSSLCICNTLETLKLILGIHVDIPCPVLLKSLRTLHLD---SVSYKDEES 189

Query: 192 EIEMFSGCPNLESLVLVNYLFD--SATISAPKLENLELC 227
              + S CP LE+LV+  Y ++  +  I  P L+ LE+C
Sbjct: 190 IRNLLSSCPILENLVVYEYWYNVVNFDIEVPSLKRLEIC 211

BLAST of Moc11g30040 vs. ExPASy Swiss-Prot
Match: Q8LF09 (F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana OX=3702 GN=At4g00160 PE=2 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-14
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 0

Query: 10  GLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRN 69
           G DRIS LPD+LL  ILS L T+ VV T V SK+W+ LW  +P L FD + Y  K+    
Sbjct: 14  GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKE---- 73

Query: 70  SSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWL-ICYASHVVQEL 129
                  + +F   + +    H    + +       +  D V +  W+ I ++ H+ + +
Sbjct: 74  -------QYTFSEIVCKSFLSHKAPVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELV 133

Query: 130 CIS--TYKTIYYNWPCGLSTCSSLLVLK-IKCGFVDDCGALKSASLRILEIECDWGDRYD 189
            ++  T     + +P  L TC++L  L+ +    VD    +   SLR L +E      Y 
Sbjct: 134 LVAADTGTGTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLEL---VSYK 193

Query: 190 RKYNEIEMFSGCPNLESLVLV 207
            + +   + SGCP LE L+++
Sbjct: 194 DESSIRNLLSGCPILEELLVI 200

BLAST of Moc11g30040 vs. ExPASy TrEMBL
Match: A0A6J1CJ18 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordica charantia OX=3673 GN=LOC111012046 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 5.1e-128
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS 60
           MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS
Sbjct: 1   MSSKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS 60

Query: 61  YPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICY 120
           YPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICY
Sbjct: 61  YPFKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICY 120

Query: 121 ASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDW 180
           ASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDW
Sbjct: 121 ASHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDW 180

Query: 181 GDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
           GDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS
Sbjct: 181 GDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 228

BLAST of Moc11g30040 vs. ExPASy TrEMBL
Match: A0A1S3CB41 (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.8e-61
Identity = 132/219 (60.27%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPDSLLH ILS  NT+ VVQTC+LSKRWKTLWT IPTLNFD++S+    S  N  
Sbjct: 17  DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSF-NYD 76

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               K  SF+ FI RVLS+H   +I  L ++ S + D++V L+E LICYA SH VQ+LC+
Sbjct: 77  DEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESV-LVELLICYAGSHNVQQLCV 136

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDR-KYN 191
           +TY    Y W      CSSL+ LK+ CGFVDD G L   SL+ILEI+CDW  R +R  Y+
Sbjct: 137 NTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANYD 196

Query: 192 EIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
            I MFSGCPNLESLVLV+YLF+SATISAP+LEN +LCAS
Sbjct: 197 GITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS 233

BLAST of Moc11g30040 vs. ExPASy TrEMBL
Match: A0A1S3CBU6 (F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.8e-61
Identity = 132/219 (60.27%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPDSLLH ILS  NT+ VVQTC+LSKRWKTLWT IPTLNFD++S+    S  N  
Sbjct: 17  DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSF-NYD 76

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               K  SF+ FI RVLS+H   +I  L ++ S + D++V L+E LICYA SH VQ+LC+
Sbjct: 77  DEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESV-LVELLICYAGSHNVQQLCV 136

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDR-KYN 191
           +TY    Y W      CSSL+ LK+ CGFVDD G L   SL+ILEI+CDW  R +R  Y+
Sbjct: 137 NTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANYD 196

Query: 192 EIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
            I MFSGCPNLESLVLV+YLF+SATISAP+LEN +LCAS
Sbjct: 197 GITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS 233

BLAST of Moc11g30040 vs. ExPASy TrEMBL
Match: A0A5A7TCF1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00570 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 4.1e-61
Identity = 132/219 (60.27%), Postives = 159/219 (72.60%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRISLLPD+LLH ILS  NT+ VVQTC+LSKRWKTLWT IPTLNFD++S+    S  N  
Sbjct: 17  DRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSSSSSF-NYD 76

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELCI 131
               K  SF+ FI RVLS+H   +I  L ++ S + D++V L+E LICYA SH VQ+LCI
Sbjct: 77  DEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESV-LVELLICYAGSHNVQQLCI 136

Query: 132 STYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWGDRYDR-KYN 191
           +TY    Y W      CSSL+ LK+ CGFVDD G L   SL+ILEI+CDW  R +R  Y+
Sbjct: 137 NTYNIGIYEWDYCFPICSSLIELKMVCGFVDDWGVLALPSLKILEIQCDWSARDERANYD 196

Query: 192 EIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS 229
            I MFSGCPNLESLVLV+YLF+SATISAP+LEN +LCAS
Sbjct: 197 GITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS 233

BLAST of Moc11g30040 vs. ExPASy TrEMBL
Match: A0A6J1CKA9 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica charantia OX=3673 GN=LOC111012077 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 133/228 (58.33%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 3   SKKKKKTGLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYP 62
           S  KKK   DRISLLPD LL  ILS +NT+QVVQTCVLSKRWKTLWT IPTLNF+F SYP
Sbjct: 109 SMSKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYP 168

Query: 63  FKQSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA- 122
           F++   N+  S  K+ SF+ FI R+LSE     I  L+++ S + D+ V L+E LIC+A 
Sbjct: 169 FEEPSLNACRS--KQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV-LVELLICFAR 228

Query: 123 SHVVQELCISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALKSASLRILEIECDWG 182
            H V+EL + TY    Y+W   LS CSSL VLK+ CGFV D G L   SLRILEIE +  
Sbjct: 229 RHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIEXE-D 288

Query: 183 DRYDRKYNEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCASS 230
              D  Y  I MFSGCPNL+SLVL+NYLF+SATI APKLENL LC+ +
Sbjct: 289 CEDDADYKGIRMFSGCPNLKSLVLINYLFESATICAPKLENLVLCSGN 332

BLAST of Moc11g30040 vs. TAIR 10
Match: AT3G52680.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.5e-18
Identity = 80/232 (34.48%), Postives = 109/232 (46.98%), Query Frame = 0

Query: 10  GLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS-----YPFK 69
           G DRIS LPD LL  ILS L T  VV T VLSK+W++LW  +P L FD D      Y F 
Sbjct: 19  GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFS 78

Query: 70  QSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHV 129
           + +  S  S+ K P  E F L+            +NF       + V +  W+    S  
Sbjct: 79  EIVCKSFLSH-KAPVLESFRLKF-----------VNF-------NPVDIGLWVGIAFSRH 138

Query: 130 VQELCISTY-----KTIYYNWPCGLSTCSSLLVLK-IKCGFVDDCGALKSASLRILEIEC 189
           ++EL +  Y     K + + +P  L TC++L  LK + C  VD    +   SLR L +E 
Sbjct: 139 LRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEF 198

Query: 190 DWGDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSA-----TISAPKLENLEL 226
               RY  + +   + SGCP LE L L  Y  D +     TI  P L+ L +
Sbjct: 199 ---VRYKDESSVRNLLSGCPGLEELRL--YRGDDSDIKVFTIEVPSLQRLTI 226

BLAST of Moc11g30040 vs. TAIR 10
Match: AT3G52680.2 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 5.5e-18
Identity = 80/232 (34.48%), Postives = 109/232 (46.98%), Query Frame = 0

Query: 10  GLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDS-----YPFK 69
           G DRIS LPD LL  ILS L T  VV T VLSK+W++LW  +P L FD D      Y F 
Sbjct: 19  GKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTFS 78

Query: 70  QSIRNSSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHV 129
           + +  S  S+ K P  E F L+            +NF       + V +  W+    S  
Sbjct: 79  EIVCKSFLSH-KAPVLESFRLKF-----------VNF-------NPVDIGLWVGIAFSRH 138

Query: 130 VQELCISTY-----KTIYYNWPCGLSTCSSLLVLK-IKCGFVDDCGALKSASLRILEIEC 189
           ++EL +  Y     K + + +P  L TC++L  LK + C  VD    +   SLR L +E 
Sbjct: 139 LRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEF 198

Query: 190 DWGDRYDRKYNEIEMFSGCPNLESLVLVNYLFDSA-----TISAPKLENLEL 226
               RY  + +   + SGCP LE L L  Y  D +     TI  P L+ L +
Sbjct: 199 ---VRYKDESSVRNLLSGCPGLEELRL--YRGDDSDIKVFTIEVPSLQRLTI 226

BLAST of Moc11g30040 vs. TAIR 10
Match: AT5G56820.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.7e-17
Identity = 69/229 (30.13%), Postives = 107/229 (46.72%), Query Frame = 0

Query: 12  DRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNSS 71
           DRIS LPD LL  ILS ++T   + T +LSKRWK +W  +PTL+ D DS     ++R   
Sbjct: 15  DRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLDEDSCRNIGTLR--- 74

Query: 72  ASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHVVQELCIS 131
                   F+      L  H    + +LN      S D    I+ L+     ++ E+ I+
Sbjct: 75  --------FDEGCCMFLKSHEAPVLTSLNLKLMTPSHD----IDRLLSNIKPILHEITIT 134

Query: 132 TYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCG------ALKSASLRILEIECDWGDRYD 191
           +Y+     +P  L+ C +L+V+K++   + D        +LKS  L  ++  C       
Sbjct: 135 SYRYSTIRFPRNLNVCQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRVKYSC------- 194

Query: 192 RKYNEIEMFSGCPNLESLVL----VNY-LFDSATISAPKLENLELCASS 230
            + +   + S CP LE L L    V+Y   +S TI  P L+ L +C  S
Sbjct: 195 -RESFTTLLSACPVLEDLDLFIGRVHYDCLNSFTIWVPSLQRLSICDES 220

BLAST of Moc11g30040 vs. TAIR 10
Match: AT1G32375.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 81.6 bits (200), Expect = 8.8e-16
Identity = 72/224 (32.14%), Postives = 108/224 (48.21%), Query Frame = 0

Query: 11  LDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNS 70
           +D++S LP++LL  ILSLL+ + VV T VLSKRW+ LW  +P L +D DSY   Q+I   
Sbjct: 1   MDKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYD-DSY---QAIEYG 60

Query: 71  SASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYASHVVQELCI 130
                   SF RF+ R  + H  + + TL+F   + S  T  +  W+       ++EL I
Sbjct: 61  --------SFSRFVDRSFTLHDAQVLDTLHFKLGKTSCGTGDIRVWIKTAEKSCLRELII 120

Query: 131 STYKTIYYN----WPCGLSTCSSLLV-LKI-KCGFVDDCGALKSASLRILEIECDWGDRY 190
              K+   N     P  L TC  +LV LK+     VD   +    SL+ L +        
Sbjct: 121 EIDKSNSDNSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPSLKTLSL-------V 180

Query: 191 DRKYNEIE----MFSGCPNLESLVLVNYLFDSATISAPKLENLE 225
             K+   E    + S CP LE LV+    +D+ T    ++ +L+
Sbjct: 181 SMKFPGDELIKMLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLK 205

BLAST of Moc11g30040 vs. TAIR 10
Match: AT4G00160.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-15
Identity = 59/201 (29.35%), Postives = 96/201 (47.76%), Query Frame = 0

Query: 10  GLDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRN 69
           G DRIS LPD+LL  ILS L T+ VV T V SK+W+ LW  +P L FD + Y  K+    
Sbjct: 14  GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKE---- 73

Query: 70  SSASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWL-ICYASHVVQEL 129
                  + +F   + +    H    + +       +  D V +  W+ I ++ H+ + +
Sbjct: 74  -------QYTFSEIVCKSFLSHKAPVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELV 133

Query: 130 CIS--TYKTIYYNWPCGLSTCSSLLVLK-IKCGFVDDCGALKSASLRILEIECDWGDRYD 189
            ++  T     + +P  L TC++L  L+ +    VD    +   SLR L +E      Y 
Sbjct: 134 LVAADTGTGTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLEL---VSYK 193

Query: 190 RKYNEIEMFSGCPNLESLVLV 207
            + +   + SGCP LE L+++
Sbjct: 194 DESSIRNLLSGCPILEELLVI 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022141765.11.0e-127100.00LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [M... [more]
XP_038890214.11.3e-6161.36F-box/LRR-repeat protein At3g26922-like [Benincasa hispida][more]
XP_008459618.13.8e-6160.27PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo][more]
XP_008459617.13.8e-6160.27PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo][more]
KAA0039267.18.5e-6160.27F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat... [more]
Match NameE-valueIdentityDescription
Q9LXJ67.8e-1734.48F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN=At3g52... [more]
Q9FJT13.9e-1630.13Putative FBD-associated F-box protein At5g56820 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LQM11.2e-1432.14Probable FBD-associated F-box protein At1g32375 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LXJ71.6e-1429.68FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana OX=3702 GN=At3g52... [more]
Q8LF093.6e-1429.35F-box/FBD/LRR-repeat protein At4g00160 OS=Arabidopsis thaliana OX=3702 GN=At4g00... [more]
Match NameE-valueIdentityDescription
A0A6J1CJ185.1e-128100.00LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordic... [more]
A0A1S3CB411.8e-6160.27F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A1S3CBU61.8e-6160.27F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A5A7TCF14.1e-6160.27F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1CKA91.2e-5758.33LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica ch... [more]
Match NameE-valueIdentityDescription
AT3G52680.15.5e-1834.48F-box/RNI-like/FBD-like domains-containing protein [more]
AT3G52680.25.5e-1834.48F-box/RNI-like/FBD-like domains-containing protein [more]
AT5G56820.12.7e-1730.13F-box/RNI-like/FBD-like domains-containing protein [more]
AT1G32375.18.8e-1632.14F-box/RNI-like/FBD-like domains-containing protein [more]
AT4G00160.12.6e-1529.35F-box/RNI-like/FBD-like domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..54
e-value: 2.5E-7
score: 32.3
NoneNo IPR availablePANTHERPTHR34223OS11G0201299 PROTEINcoord: 4..226
NoneNo IPR availablePANTHERPTHR34223:SF51OS11G0201299 PROTEINcoord: 4..226
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 90..225
IPR001810F-box domainPFAMPF00646F-boxcoord: 13..51
e-value: 1.6E-5
score: 24.6
IPR001810F-box domainPROSITEPS50181FBOXcoord: 11..61
score: 9.338503
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 4..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g30040.1Moc11g30040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding