Moc11g29950 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g29950
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 21933893 .. 21935494 (+)
RNA-Seq Expression	Moc11g29950
Synteny	Moc11g29950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGATCTTGATTTCGAATGGACCTTCTCGAATGATGGATCATCGTCGAATCCTTCGTCTGAATCTCGACCCTACTGTCCGTTCTGGGTGGATAATTCCACTCTTACGACGAGGGACTTGCGTCGCTTGCGTTCAAAATACCGTATCCCGGATTCAGTTAGCCTTCGTCTTCCGAATCCGGGAGAGAGTGTCGATGGCTCTTTTCTCGGTGAGGTTGTATTTTATGCAGCTATATTCCAATTTGGAGTCCGCCTACCGTTGCCTCTTTTCCTTCAAAACTTTTTAGCTTTCAATCAAGTAGCTCCCTCCCAAATCGTCACGAATGGGTGGTTTACTTTGATCAGTTGCTTTATTTTGTGGTCGTACCTCGGGGGCGAGTAACCTCTAACCGCTGCAGATTTCATGTCGCTTTATTACCTTAATCACAGTCCCGAGGATAACTTTCATTTTTATGTTAGTTCTCGGAATCAGGTTCTCGTTATGGGTCCTTCCTTAATGAAGCATTGGAAGAATGAGTTTTTCTTTATGAGTGGCGATTGGTTAGTCCGTGCGAGAGAGGACTGTACTTTCCCGTCCCGACTGAGTGTAGGGAGTTAGATAAGTAGATTCCCGAGCTCTATTAGGACTTTCGTAGATATCTATTCTGATATTTCTCTTTCTTGTTGACAGTTTCCCATAATTGTGAGCTTACTGGTCGAGGCATTCAATTTCTACCATACTAATATCCAGTTATCGGATACCGAGCGTTGGGGTCTAGATCTTGTTAAGGAGCGGAACTTAGTGAACTTTGGCTTGACTGCCCCTCATAACCCTTCAGGCACTTGTCGAAATCCTTTCTTTGTTTTGCGTGAAAGTCGATTTTTACCTTTATCTCTACTTGTAGAAATGTCGAGACAAAGTACTTCCCTGTATGAAAGAGAACACCGCCGAAACTCTCGAAGTTTGGGGGCCGGCTCTAGCCATGCTTCGGATATCGAAATGACTGACTTGACTGAGGAGGGACCCCCTTCTCAGCAGGCTCGCTCCTCCATGCCTCCTACAATCCCGAGGCGTTCCGCCCGACTTCATGGGACGTCTATCCCGTCTTCCCCTCGAGGTCATTCAGGGAGCTTCTCCCAAGCTTTAATCTACCCTTTCTTTGGGCCGTATAGTGATGATGTTGACGGGACAACCTACCTGGAAAGGGCATTTAGCCTTTGGCAGGGGCTCGGCGACTCATCGAGTGGGTCCGATTTTGGCCTGTCAAATCCTCAACACAACATCAGTACGTGCCTTAGCAATCTTCACCAGGTGCGCACTTTGTAGCTTCAAGTATTTGTCATAGCATCTTTCCCTAACGTCGGTTTCTGTCCTTGGCAGGTTTTCAATTGTCTAGTGGTATTCTAGGGTCGGGTTGCCGATGAAATTAATCACCTCCGCTGCCACTATGCTCCTTGGGAAGAGTTGAATCAGGCTCTTTCTTCCTTGAACCAAGCCAACAAAATTCTTGAGAGTACCCAACGTGAGTTGGAAACGGAGAAGAGAAAATCTCGAGATGAGTTGGCCAACTTGCAGAGGAGGCTTGACGCCTGGCTTTCTAATTCTGAATTCTTGGCCTGA

mRNA sequence

ATGGTCGATCTTGATTTCGAATGGACCTTCTCGAATGATGGATCATCGTCGAATCCTTCGTCTGAATCTCGACCCTACTGTCCGTTCTGGGTGGATAATTCCACTCTTACGACGAGGGACTTGCGTCGCTTGCGTTCAAAATACCGTATCCCGGATTCAGTTAGCCTTCGTCTTCCGAATCCGGGAGAGAGTGTCGATGGCTCTTTTCTCGGTGAGTTTCCCATAATTGTGAGCTTACTGGTCGAGGCATTCAATTTCTACCATACTAATATCCAGTTATCGGATACCGAGCGTTGGGGTCTAGATCTTGTTAAGGAGCGGAACTTAGTGAACTTTGGCTTGACTGCCCCTCATAACCCTTCAGGCACTTGTCGAAATCCTTTCTTTGTTTTGCGTGAAAGTCGATTTTTACCTTTATCTCTACTTGTAGAAATGTCGAGACAAAGTACTTCCCTGTATGAAAGAGAACACCGCCGAAACTCTCGAAGTTTGGGGGCCGGCTCTAGCCATGCTTCGGATATCGAAATGACTGACTTGACTGAGGAGGGACCCCCTTCTCAGCAGGCTCGCTCCTCCATGCCTCCTACAATCCCGAGGCGTTCCGCCCGACTTCATGGGACGTCTATCCCGTCTTCCCCTCGAGGTCATTCAGGGAGCTTCTCCCAAGCTTTAATCTACCCTTTCTTTGGGCCGTATAGTGATGATGTTGACGGGACAACCTACCTGGAAAGGGCATTTAGCCTTTGGCAGGGGCTCGGCGACTCATCGAGTGGGTCCGATTTTGGCCTGTCAAATCCTCAACACAACATCAGTACGTGCCTTAGCAATCTTCACCAGGGTCGGGTTGCCGATGAAATTAATCACCTCCGCTGCCACTATGCTCCTTGGGAAGAGTTGAATCAGGCTCTTTCTTCCTTGAACCAAGCCAACAAAATTCTTGAGAGTACCCAACGTGAGTTGGAAACGGAGAAGAGAAAATCTCGAGATGAGTTGGCCAACTTGCAGAGGAGGCTTGACGCCTGGCTTTCTAATTCTGAATTCTTGGCCTGA

Coding sequence (CDS)

ATGGTCGATCTTGATTTCGAATGGACCTTCTCGAATGATGGATCATCGTCGAATCCTTCGTCTGAATCTCGACCCTACTGTCCGTTCTGGGTGGATAATTCCACTCTTACGACGAGGGACTTGCGTCGCTTGCGTTCAAAATACCGTATCCCGGATTCAGTTAGCCTTCGTCTTCCGAATCCGGGAGAGAGTGTCGATGGCTCTTTTCTCGGTGAGTTTCCCATAATTGTGAGCTTACTGGTCGAGGCATTCAATTTCTACCATACTAATATCCAGTTATCGGATACCGAGCGTTGGGGTCTAGATCTTGTTAAGGAGCGGAACTTAGTGAACTTTGGCTTGACTGCCCCTCATAACCCTTCAGGCACTTGTCGAAATCCTTTCTTTGTTTTGCGTGAAAGTCGATTTTTACCTTTATCTCTACTTGTAGAAATGTCGAGACAAAGTACTTCCCTGTATGAAAGAGAACACCGCCGAAACTCTCGAAGTTTGGGGGCCGGCTCTAGCCATGCTTCGGATATCGAAATGACTGACTTGACTGAGGAGGGACCCCCTTCTCAGCAGGCTCGCTCCTCCATGCCTCCTACAATCCCGAGGCGTTCCGCCCGACTTCATGGGACGTCTATCCCGTCTTCCCCTCGAGGTCATTCAGGGAGCTTCTCCCAAGCTTTAATCTACCCTTTCTTTGGGCCGTATAGTGATGATGTTGACGGGACAACCTACCTGGAAAGGGCATTTAGCCTTTGGCAGGGGCTCGGCGACTCATCGAGTGGGTCCGATTTTGGCCTGTCAAATCCTCAACACAACATCAGTACGTGCCTTAGCAATCTTCACCAGGGTCGGGTTGCCGATGAAATTAATCACCTCCGCTGCCACTATGCTCCTTGGGAAGAGTTGAATCAGGCTCTTTCTTCCTTGAACCAAGCCAACAAAATTCTTGAGAGTACCCAACGTGAGTTGGAAACGGAGAAGAGAAAATCTCGAGATGAGTTGGCCAACTTGCAGAGGAGGCTTGACGCCTGGCTTTCTAATTCTGAATTCTTGGCCTGA

Protein sequence

MVDLDFEWTFSNDGSSSNPSSESRPYCPFWVDNSTLTTRDLRRLRSKYRIPDSVSLRLPNPGESVDGSFLGEFPIIVSLLVEAFNFYHTNIQLSDTERWGLDLVKERNLVNFGLTAPHNPSGTCRNPFFVLRESRFLPLSLLVEMSRQSTSLYEREHRRNSRSLGAGSSHASDIEMTDLTEEGPPSQQARSSMPPTIPRRSARLHGTSIPSSPRGHSGSFSQALIYPFFGPYSDDVDGTTYLERAFSLWQGLGDSSSGSDFGLSNPQHNISTCLSNLHQGRVADEINHLRCHYAPWEELNQALSSLNQANKILESTQRELETEKRKSRDELANLQRRLDAWLSNSEFLA

Homology

[Close]

BLAST of Moc11g29950 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 3.4e-45
Identity = 132/280 (47.14%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 82   EAFNFYHTNIQLSDTERWGLDLVKERNLVNFGLTAPHNPSGTCRNPFFVLRESRFLPLSL 141
            EA  FYHT IQL D ERWG DLV E+NLV+FGL  PHNP                     
Sbjct: 1014 EASTFYHTVIQLPDIERWGPDLVTEQNLVDFGLALPHNPP-------------------- 1073

Query: 142  LVEMSRQSTSLYEREHRRNSRSLGAGSSHASDIEMTDLTEEGPPSQQARSSMPPTIPRRS 201
              EM R+S SLYEREHRR++RSL AGS  ASDIE                          
Sbjct: 1074 --EMLRRSASLYEREHRRDARSLEAGSGRASDIE-------------------------- 1133

Query: 202  ARLHGTSIPSSPRGHSGSFSQALIYPFFGPYSDDVDGTTYLERAFSLWQGLGDSSSGSDF 261
                                                             GL DSSS SDF
Sbjct: 1134 -------------------------------------------------GLDDSSSWSDF 1193

Query: 262  GLSNPQHNISTCLSNLHQ---------GRVADEINHLRCHYAPWEELNQALSSLNQANKI 321
            GLSNP H+IST LS+LHQ         G VADEINHLRCHY P E+L QA+SSLNQAN +
Sbjct: 1194 GLSNPHHSISTWLSDLHQIFNRLVVFSGWVADEINHLRCHYTPREKLEQAISSLNQANSL 1196

Query: 322  LESTQRELETEKRKSRDELANLQRRLD---AWLSNSEFLA 350
            LE TQR+LE EKRKSRDELANLQRRLD   A L NSEFLA
Sbjct: 1254 LEGTQRKLEMEKRKSRDELANLQRRLDEVNARLFNSEFLA 1196

[Close]

BLAST of Moc11g29950 vs. NCBI nr
Match: XP_022147193.1 (uncharacterized protein LOC111016203 [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-16
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 252 LGDSSSGSDFGLSNPQHNISTCLSNLHQ---------GRVADEINHLRCHYAPWEELNQA 311
           +G+SS GS FG SN Q +I TCLS+LHQ         GRV DEINHLR H+A  +EL+Q 
Sbjct: 73  IGESSGGSSFGYSNLQQSIHTCLSDLHQVFNPSVVFSGRVTDEINHLRSHHARRDELDQT 132

Query: 312 LSSLNQANKILESTQRELETEKRKSRDELANLQRRLDA---WLSNSEFLA 350
           L+SL+QAN +L + + +LE  K KS D+LA LQR+L+     LSNS+FLA
Sbjct: 133 LASLDQANMLLANVRHDLEVGKGKSGDDLAALQRKLNEANDRLSNSKFLA 182

[Close]

BLAST of Moc11g29950 vs. NCBI nr
Match: XP_022150031.1 (uncharacterized protein LOC111018304 [Momordica charantia])

HSP 1 Score: 85.9 bits (211), Expect = 7.6e-13
Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 281 RVADEINHLRCHYAPWEELNQALSSLNQANKILESTQRELETEKRKSRDELANLQRRLD- 340
           RVAD+INHLR HY P  EL+QAL+SLNQAN +L +TQ +LE E+R+SRD+L  LQ++LD 
Sbjct: 99  RVADKINHLRRHYTPPNELDQALASLNQANSMLANTQHDLEVERRRSRDDLVVLQKKLDE 158

Query: 341 --AWLSNSEFLA 350
             A LSNSEFLA
Sbjct: 159 ANAQLSNSEFLA 170

[Close]

BLAST of Moc11g29950 vs. ExPASy TrEMBL
Match: A0A6J1DSS1 (uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023586 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 132/280 (47.14%), Postives = 143/280 (51.07%), Query Frame = 0


Query: 82   EAFNFYHTNIQLSDTERWGLDLVKERNLVNFGLTAPHNPSGTCRNPFFVLRESRFLPLSL 141
            EA  FYHT IQL D ERWG DLV E+NLV+FGL  PHNP                     
Sbjct: 1014 EASTFYHTVIQLPDIERWGPDLVTEQNLVDFGLALPHNPP-------------------- 1073

Query: 142  LVEMSRQSTSLYEREHRRNSRSLGAGSSHASDIEMTDLTEEGPPSQQARSSMPPTIPRRS 201
              EM R+S SLYEREHRR++RSL AGS  ASDIE                          
Sbjct: 1074 --EMLRRSASLYEREHRRDARSLEAGSGRASDIE-------------------------- 1133

Query: 202  ARLHGTSIPSSPRGHSGSFSQALIYPFFGPYSDDVDGTTYLERAFSLWQGLGDSSSGSDF 261
                                                             GL DSSS SDF
Sbjct: 1134 -------------------------------------------------GLDDSSSWSDF 1193

Query: 262  GLSNPQHNISTCLSNLHQ---------GRVADEINHLRCHYAPWEELNQALSSLNQANKI 321
            GLSNP H+IST LS+LHQ         G VADEINHLRCHY P E+L QA+SSLNQAN +
Sbjct: 1194 GLSNPHHSISTWLSDLHQIFNRLVVFSGWVADEINHLRCHYTPREKLEQAISSLNQANSL 1196

Query: 322  LESTQRELETEKRKSRDELANLQRRLD---AWLSNSEFLA 350
            LE TQR+LE EKRKSRDELANLQRRLD   A L NSEFLA
Sbjct: 1254 LEGTQRKLEMEKRKSRDELANLQRRLDEVNARLFNSEFLA 1196

[Close]

BLAST of Moc11g29950 vs. ExPASy TrEMBL
Match: A0A6J1D0L6 (uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016203 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.2e-17
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 252 LGDSSSGSDFGLSNPQHNISTCLSNLHQ---------GRVADEINHLRCHYAPWEELNQA 311
           +G+SS GS FG SN Q +I TCLS+LHQ         GRV DEINHLR H+A  +EL+Q 
Sbjct: 73  IGESSGGSSFGYSNLQQSIHTCLSDLHQVFNPSVVFSGRVTDEINHLRSHHARRDELDQT 132

Query: 312 LSSLNQANKILESTQRELETEKRKSRDELANLQRRLDA---WLSNSEFLA 350
           L+SL+QAN +L + + +LE  K KS D+LA LQR+L+     LSNS+FLA
Sbjct: 133 LASLDQANMLLANVRHDLEVGKGKSGDDLAALQRKLNEANDRLSNSKFLA 182

[Close]

BLAST of Moc11g29950 vs. ExPASy TrEMBL
Match: A0A6J1DA80 (uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018304 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-13
Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 281 RVADEINHLRCHYAPWEELNQALSSLNQANKILESTQRELETEKRKSRDELANLQRRLD- 340
           RVAD+INHLR HY P  EL+QAL+SLNQAN +L +TQ +LE E+R+SRD+L  LQ++LD 
Sbjct: 99  RVADKINHLRRHYTPPNELDQALASLNQANSMLANTQHDLEVERRRSRDDLVVLQKKLDE 158

Query: 341 --AWLSNSEFLA 350
             A LSNSEFLA
Sbjct: 159 ANAQLSNSEFLA 170

The following BLAST results are available for this feature:

BLAST of Moc11g29950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156747.1	3.4e-45	47.14	uncharacterized protein LOC111023586 [Momordica charantia]	[more]
XP_022147193.1	1.5e-16	53.64	uncharacterized protein LOC111016203 [Momordica charantia]	[more]
XP_022150031.1	7.6e-13	65.28	uncharacterized protein LOC111018304 [Momordica charantia]	[more]

BLAST of Moc11g29950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g29950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSS1	1.6e-45	47.14	uncharacterized protein LOC111023586 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1D0L6	7.2e-17	53.64	uncharacterized protein LOC111016203 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DA80	3.7e-13	65.28	uncharacterized protein LOC111018304 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Moc11g29950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 299..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g29950.1	Moc11g29950.1	mRNA