Moc11g29840 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g29840
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	alpha/beta-Hydrolases superfamily protein
Location	chr11: 21871682 .. 21871891 (+)
RNA-Seq Expression	Moc11g29840
Synteny	Moc11g29840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTAAGCAATCCATTTCCTGACAATAAGGGATCTGTTCATATGTGGCAAGGGATTGAAGATCGTATGGTTCCTATTGAATTGAATCGTTTAATAGCACAAAAGCTTCCTTGGATTCAGTATCGTGAGGTTCCTGATGCTGGCCATCTATTAATTCATAAAGCTGAACATTTTGAAGCCATTCTAAGGGCTCTTCTTGCCCGATAG

mRNA sequence

ATGGACTTAAGCAATCCATTTCCTGACAATAAGGGATCTGTTCATATGTGGCAAGGGATTGAAGATCGTATGGTTCCTATTGAATTGAATCGTTTAATAGCACAAAAGCTTCCTTGGATTCAGTATCGTGAGGTTCCTGATGCTGGCCATCTATTAATTCATAAAGCTGAACATTTTGAAGCCATTCTAAGGGCTCTTCTTGCCCGATAG

Coding sequence (CDS)

ATGGACTTAAGCAATCCATTTCCTGACAATAAGGGATCTGTTCATATGTGGCAAGGGATTGAAGATCGTATGGTTCCTATTGAATTGAATCGTTTAATAGCACAAAAGCTTCCTTGGATTCAGTATCGTGAGGTTCCTGATGCTGGCCATCTATTAATTCATAAAGCTGAACATTTTGAAGCCATTCTAAGGGCTCTTCTTGCCCGATAG

Protein sequence

MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFEAILRALLAR

Homology

[Close]

BLAST of Moc11g29840 vs. NCBI nr
Match: XP_038890210.1 (uncharacterized protein LOC120079849 [Benincasa hispida])

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 54/67 (80.60%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M+L+NPFPDNKGSVHMWQG EDR+VPIELNR IAQKLPWIQY E+P+ GHLL+H+A++FE
Sbjct: 284 MELTNPFPDNKGSVHMWQGSEDRIVPIELNRFIAQKLPWIQYHELPNYGHLLVHEAQNFE 343

Query: 61  AILRALL 68
           AILRALL
Sbjct: 344 AILRALL 350

[Close]

BLAST of Moc11g29840 vs. NCBI nr
Match: XP_022973956.1 (uncharacterized protein LOC111472577 [Cucurbita maxima])

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M L+NPFPDNKGSVHMWQG EDRMVPIELNR IAQKL WIQY E+P+ GHLL+H+AE FE
Sbjct: 269 MALTNPFPDNKGSVHMWQGSEDRMVPIELNRFIAQKLTWIQYHEIPNRGHLLVHEAEPFE 328

Query: 61  AILRALLA 69
           AILRALLA
Sbjct: 329 AILRALLA 336

[Close]

BLAST of Moc11g29840 vs. NCBI nr
Match: XP_022925490.1 (uncharacterized protein LOC111432776 [Cucurbita moschata])

HSP 1 Score: 121.7 bits (304), Expect = 2.5e-24
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M L+NPFPDNKGSVHMWQG EDRMVPIELNR IAQKL WIQY E+P+ GHLL+H+AE FE
Sbjct: 269 MALTNPFPDNKGSVHMWQGSEDRMVPIELNRFIAQKLTWIQYHEIPNHGHLLVHEAEPFE 328

Query: 61  AILRALLA 69
           AILRALLA
Sbjct: 329 AILRALLA 336

[Close]

BLAST of Moc11g29840 vs. NCBI nr
Match: XP_022142538.1 (uncharacterized protein LOC111012628 [Momordica charantia] >XP_022142540.1 uncharacterized protein LOC111012628 [Momordica charantia])

HSP 1 Score: 120.9 bits (302), Expect = 4.2e-24
Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           ++LSNPFPDNKGSVHMWQG EDR++PIE NR IA+KLPWIQY EVP+AGHL+IH AE F 
Sbjct: 270 INLSNPFPDNKGSVHMWQGCEDRVIPIEFNRFIAEKLPWIQYHEVPNAGHLIIHDAEVFG 329

Query: 61  AILRALLAR 70
           AI+RALLAR
Sbjct: 330 AIIRALLAR 338

[Close]

BLAST of Moc11g29840 vs. NCBI nr
Match: XP_023535507.1 (uncharacterized protein LOC111796927 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.6 bits (301), Expect = 5.5e-24
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M L+NPFPDNKGSVHMWQG EDRMVPIELNR IAQKL WIQY E+P+ GHLL+H+A+ FE
Sbjct: 269 MALTNPFPDNKGSVHMWQGSEDRMVPIELNRFIAQKLTWIQYHEIPNQGHLLVHEAKPFE 328

Query: 61  AILRALLA 69
           AILRALLA
Sbjct: 329 AILRALLA 336

[Close]

BLAST of Moc11g29840 vs. ExPASy TrEMBL
Match: A0A6J1IA23 (uncharacterized protein LOC111472577 OS=Cucurbita maxima OX=3661 GN=LOC111472577 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-25
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M L+NPFPDNKGSVHMWQG EDRMVPIELNR IAQKL WIQY E+P+ GHLL+H+AE FE
Sbjct: 269 MALTNPFPDNKGSVHMWQGSEDRMVPIELNRFIAQKLTWIQYHEIPNRGHLLVHEAEPFE 328

Query: 61  AILRALLA 69
           AILRALLA
Sbjct: 329 AILRALLA 336

[Close]

BLAST of Moc11g29840 vs. ExPASy TrEMBL
Match: A0A6J1EI49 (uncharacterized protein LOC111432776 OS=Cucurbita moschata OX=3662 GN=LOC111432776 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M L+NPFPDNKGSVHMWQG EDRMVPIELNR IAQKL WIQY E+P+ GHLL+H+AE FE
Sbjct: 269 MALTNPFPDNKGSVHMWQGSEDRMVPIELNRFIAQKLTWIQYHEIPNHGHLLVHEAEPFE 328

Query: 61  AILRALLA 69
           AILRALLA
Sbjct: 329 AILRALLA 336

[Close]

BLAST of Moc11g29840 vs. ExPASy TrEMBL
Match: A0A6J1CL81 (uncharacterized protein LOC111012628 OS=Momordica charantia OX=3673 GN=LOC111012628 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           ++LSNPFPDNKGSVHMWQG EDR++PIE NR IA+KLPWIQY EVP+AGHL+IH AE F 
Sbjct: 270 INLSNPFPDNKGSVHMWQGCEDRVIPIEFNRFIAEKLPWIQYHEVPNAGHLIIHDAEVFG 329

Query: 61  AILRALLAR 70
           AI+RALLAR
Sbjct: 330 AIIRALLAR 338

[Close]

BLAST of Moc11g29840 vs. ExPASy TrEMBL
Match: A0A6J1EWC7 (uncharacterized protein LOC111438516 OS=Cucurbita moschata OX=3662 GN=LOC111438516 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 53/69 (76.81%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           +DLSNPFP+N GSVH+W   ED +VPIELNRLIA+K PWIQY EVPDAGHL+IH AE+FE
Sbjct: 270 LDLSNPFPNNDGSVHLWSSSEDHVVPIELNRLIAEKHPWIQYHEVPDAGHLIIHDAENFE 329

Query: 61  AILRALLAR 70
           AI+RALLAR
Sbjct: 330 AIIRALLAR 338

[Close]

BLAST of Moc11g29840 vs. ExPASy TrEMBL
Match: A0A6J1I094 (uncharacterized protein LOC111469316 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469316 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           +DLSNPFP+N GSVH+W G EDR+VPIE+NRLIA+K PWIQY EVPDAGHL+IH +E FE
Sbjct: 338 LDLSNPFPNNDGSVHLWSGSEDRVVPIEVNRLIAEKHPWIQYHEVPDAGHLIIHDSEKFE 397

Query: 61  AILRALLAR 70
           AI+RALL R
Sbjct: 398 AIIRALLGR 406

[Close]

BLAST of Moc11g29840 vs. TAIR 10
Match: AT3G54240.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.8e-17
Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 1   MDLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 60
           M + NPFP  +GSVHMWQG +DR+VPI+L R+IAQKL WI+Y E+P AGH+        E
Sbjct: 278 MKIENPFPKGEGSVHMWQGDDDRLVPIQLQRIIAQKLTWIKYHEIPGAGHIFPMADGMAE 337

Query: 61  AILRALL 68
            IL+ LL
Sbjct: 338 TILKELL 344

[Close]

BLAST of Moc11g29840 vs. TAIR 10
Match: AT5G22460.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 5.3e-17
Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 2   DLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFEA 61
           +L NPF + +GSVH+WQG+EDR++P E+NR I++KLPWI+Y EV   GHLL  + E  + 
Sbjct: 273 ELENPFAEGEGSVHVWQGMEDRIIPYEINRYISEKLPWIKYHEVLGYGHLLNAEEEKCKD 332

Query: 62  ILRALL 68
           I++ALL
Sbjct: 333 IIKALL 338

[Close]

BLAST of Moc11g29840 vs. TAIR 10
Match: AT5G22460.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 5.3e-17
Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 2   DLSNPFPDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFEA 61
           +L NPF + +GSVH+WQG+EDR++P E+NR I++KLPWI+Y EV   GHLL  + E  + 
Sbjct: 273 ELENPFAEGEGSVHVWQGMEDRIIPYEINRYISEKLPWIKYHEVLGYGHLLNAEEEKCKD 332

Query: 62  ILRALL 68
           I++ALL
Sbjct: 333 IIKALL 338

[Close]

BLAST of Moc11g29840 vs. TAIR 10
Match: AT3G03240.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 9.1e-17
Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 2   DLSNPF-PDNKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 61
           +LSNPF  DNKGSVH+W  +ED+ +  E+   +  KLPWI+  EVPDAGHL+IH+ +HFE
Sbjct: 266 ELSNPFSDDNKGSVHIWCALEDKQISHEVLLYLCDKLPWIKLHEVPDAGHLIIHEKQHFE 325

Query: 62  AILRA 66
            I++A
Sbjct: 326 DIIKA 330

[Close]

BLAST of Moc11g29840 vs. TAIR 10
Match: AT3G03230.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 4.5e-16
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 2   DLSNPFPD-NKGSVHMWQGIEDRMVPIELNRLIAQKLPWIQYREVPDAGHLLIHKAEHFE 61
           +L NPF D NKGSVHMW  +ED+ +  ++   I  KLPWI+  EVPD GH +IH+  HFE
Sbjct: 265 ELKNPFSDSNKGSVHMWCALEDKQISRDVLLYICDKLPWIKLHEVPDGGHYIIHEKRHFE 324

Query: 62  AILRA 66
           AI++A
Sbjct: 325 AIIKA 329

The following BLAST results are available for this feature:

BLAST of Moc11g29840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890210.1	1.4e-24	80.60	uncharacterized protein LOC120079849 [Benincasa hispida]	[more]
XP_022973956.1	1.9e-24	82.35	uncharacterized protein LOC111472577 [Cucurbita maxima]	[more]
XP_022925490.1	2.5e-24	82.35	uncharacterized protein LOC111432776 [Cucurbita moschata]	[more]
XP_022142538.1	4.2e-24	78.26	uncharacterized protein LOC111012628 [Momordica charantia] >XP_022142540.1 uncha...	[more]
XP_023535507.1	5.5e-24	80.88	uncharacterized protein LOC111796927 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Moc11g29840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g29840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA23	9.2e-25	82.35	uncharacterized protein LOC111472577 OS=Cucurbita maxima OX=3661 GN=LOC111472577...	[more]
A0A6J1EI49	1.2e-24	82.35	uncharacterized protein LOC111432776 OS=Cucurbita moschata OX=3662 GN=LOC1114327...	[more]
A0A6J1CL81	2.0e-24	78.26	uncharacterized protein LOC111012628 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1EWC7	1.3e-23	76.81	uncharacterized protein LOC111438516 OS=Cucurbita moschata OX=3662 GN=LOC1114385...	[more]
A0A6J1I094	1.7e-23	75.36	uncharacterized protein LOC111469316 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Moc11g29840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54240.1	1.8e-17	56.72	alpha/beta-Hydrolases superfamily protein	[more]
AT5G22460.1	5.3e-17	54.55	alpha/beta-Hydrolases superfamily protein	[more]
AT5G22460.2	5.3e-17	54.55	alpha/beta-Hydrolases superfamily protein	[more]
AT3G03240.1	9.1e-17	55.38	alpha/beta-Hydrolases superfamily protein	[more]
AT3G03230.1	4.5e-16	53.85	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 2..68 e-value: 1.5E-8 score: 36.6
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 3..66
None	No IPR available	PANTHER	PTHR45763	HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED	coord: 1..68
None	No IPR available	PANTHER	PTHR45763:SF21	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g29840.1	Moc11g29840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity