Moc11g29680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g29680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 21733478 .. 21735087 (+)
RNA-Seq Expression	Moc11g29680
Synteny	Moc11g29680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGGCGAGTCTCATGGCGAGCCAGAAAACAACAATGGGACTGATGAAGGCTTTGACTAACAGGTATGAAAAATCTTCTGCCAACAGCAAGGTGTATCTCATTACGAGATACTTCAACATCCACATGGAGGAGGGTACCTTAGTGAACTCCCACATAAATGAGGTCATTGATCTGATGAACAAGTTGGAGTCCATGGAAGTCACATTCTCAGAGGAGGTGAAGGCTATAAAACTTCTATCCTCATTGCTTAACAGTTGGAAGACGATGAAGACGACTATGTCGAATTCGTTGGGAGACAAGAGTTTGAAACTTTAAGATATCTGTGACGCTGCAATTGCTAAGAAGGTTCGTAGAAAGGAGAGTGGGAAGAATTCTGCATCCACTTCCGAAGGGGAAACGGTTTAGAATCAACATTGATAGTTCAAAGTAGGGGCAAAGGGAAGATGATTTACAAGGGAATCAGCAGTATAGCAACCAAAGGAATCAGAGTAGTAGTAAGGATATAGAATGTTTTTACTACCACAAGAAGGGATACATTAAGCGGTTTTGTAGGAAACTTAAGCAGCATCAACAAAATGGAGATTCTACTAATGTTGTAGAAATAGTAAAAGAGTTTCTAGCTTGTGTTGGGAGCAACTCAATAGATCGACCATCATTGTGGGTTGTGGACACTACAACATCCGTACATGTATCTTCGAACAAGAACTGGTTATCATCTTTCACTAGTCAGCATGACACGGTAACGATGGGAAATGACATTGTCTCCAAAGGTAAAGGAATTGGGAATGTCTGTTTGAAGACCGATGGGGAAAAAAGTTAGTGTTGTGAGCTGTCAAGTATATTACAAGTTTAAGAAAGAATTTGCTACCTGTTGGAAAAATAGATGAAGATGGTTACAAAAGTGAGTTCGCAGAGGGTAGCTAGAAACTTCTGAGGTGATCGAGGTAGTGGCAGTGGGCCATAAACAAGCTTTTGTTTATGTGCTAAATTTGAGGTTGTCAGGGGATTTAAGAGACAGAGAATGCAAAGGATGGAAGATGATTCAGGGCAAAACTTTAATGAATCAGCAACATTGACAACCAAGACAAAATAAGAAATTCTACCATCAGTTCAAGTACAACAACTAGGAAGTAAAGGAAAATGGGAACAACTCAGTGAGTCGTTGTTCAACAGGTTGTTAGTTTCGAGCCCGAATTGTCAGACAGTTTGGAGTTGATGAAGTCGCGTAGGCAAAAGAGTGCATTGAGGAAACATACTATAGTTGGTGTTGTGGTCAAAGGAGAAATCTCTAGAGTGGCAACGAACTTGGGTGGAAGTGCCAAGTCATCAGAGGGGAGACTACCTTCGTAGGTCGTTGGGTTTGATCGAGGAAGGAAGCATCAAGGGCCACCTAGATCAAGTGGGAGCACGTGGCTATGTCTCGGAGCAATCATACAAGAAGCTTGGTTAGGGCTGAGTAGTTGTTGATCAGTTACTGTTGGTGTAGCAGAACTGAGCTTTGGCGGGGTTGCCAAGATGATGAGATACTGTTTGTGCAGTGGGAGGCAAGATCGATGTTTCATCTCCAAGTGGGAGATTGTTGGGATAATGGAGCCAAAACATGA

mRNA sequence

ATGAATGTGGCGAGTCTCATGGCGAGCCAGAAAACAACAATGGGACTGATGAAGGCTTTGACTAACAGGTATGAAAAATCTTCTGCCAACAGCAAGGTGTATCTCATTACGAGATACTTCAACATCCACATGGAGGAGGGTACCTTAGTGAACTCCCACATAAATGAGGTCATTGATCTGATGAACAAGTTGGAGTCCATGGAAGTCACATTCTCAGAGGAGGGGCAAAGGGAAGATGATTTACAAGGGAATCAGCAGTATAGCAACCAAAGGAATCAGAGTAGTAGTAAGGATATAGAATGTTTTTACTACCACAAGAAGGGATACATTAAGCGGTTTTGTAGGAAACTTAAGCAGCATCAACAAAATGGAGATTCTACTAATGTTGTAGAAATAGTAAAAGAGTTTCTAGCTTGTGTTGGGAGCAACTCAATAGATCGACCATCATTGTGGGTTGTGGACACTACAACATCCGTACATGTATCTTCGAACAAGAACTGGTTATCATCTTTCACTAGTCAGCATGACACGGTAACGATGGGAAATGACATTGTCTCCAAAGGTAAAGGAATTGGGAATGTTGTTAGTTTCGAGCCCGAATTGTCAGACAGTTTGGAGTTGATGAAGTCGCGTAGGCAAAAGAGTGCATTGAGGAAACATACTATAGTTGGTGTTGTGGTCAAAGGAGAAATCTCTAGAGTGGCAACGAACTTGGGTGGAAGTGCCAAGTCATCAGAGGGGAGACTACCTTCAACTGAGCTTTGGCGGGGTTGCCAAGATGATGAGATACTGTTTGTGCAGTGGGAGGCAAGATCGATGTTTCATCTCCAAGTGGGAGATTGTTGGGATAATGGAGCCAAAACATGA

Coding sequence (CDS)

ATGAATGTGGCGAGTCTCATGGCGAGCCAGAAAACAACAATGGGACTGATGAAGGCTTTGACTAACAGGTATGAAAAATCTTCTGCCAACAGCAAGGTGTATCTCATTACGAGATACTTCAACATCCACATGGAGGAGGGTACCTTAGTGAACTCCCACATAAATGAGGTCATTGATCTGATGAACAAGTTGGAGTCCATGGAAGTCACATTCTCAGAGGAGGGGCAAAGGGAAGATGATTTACAAGGGAATCAGCAGTATAGCAACCAAAGGAATCAGAGTAGTAGTAAGGATATAGAATGTTTTTACTACCACAAGAAGGGATACATTAAGCGGTTTTGTAGGAAACTTAAGCAGCATCAACAAAATGGAGATTCTACTAATGTTGTAGAAATAGTAAAAGAGTTTCTAGCTTGTGTTGGGAGCAACTCAATAGATCGACCATCATTGTGGGTTGTGGACACTACAACATCCGTACATGTATCTTCGAACAAGAACTGGTTATCATCTTTCACTAGTCAGCATGACACGGTAACGATGGGAAATGACATTGTCTCCAAAGGTAAAGGAATTGGGAATGTTGTTAGTTTCGAGCCCGAATTGTCAGACAGTTTGGAGTTGATGAAGTCGCGTAGGCAAAAGAGTGCATTGAGGAAACATACTATAGTTGGTGTTGTGGTCAAAGGAGAAATCTCTAGAGTGGCAACGAACTTGGGTGGAAGTGCCAAGTCATCAGAGGGGAGACTACCTTCAACTGAGCTTTGGCGGGGTTGCCAAGATGATGAGATACTGTTTGTGCAGTGGGAGGCAAGATCGATGTTTCATCTCCAAGTGGGAGATTGTTGGGATAATGGAGCCAAAACATGA

Protein sequence

MNVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLMNKLESMEVTFSEEGQREDDLQGNQQYSNQRNQSSSKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIVKEFLACVGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSFTSQHDTVTMGNDIVSKGKGIGNVVSFEPELSDSLELMKSRRQKSALRKHTIVGVVVKGEISRVATNLGGSAKSSEGRLPSTELWRGCQDDEILFVQWEARSMFHLQVGDCWDNGAKT

Homology

[Close]

BLAST of Moc11g29680 vs. NCBI nr
Match: RVW64114.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-12
Identity = 83/343 (24.20%), Postives = 150/343 (43.73%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 24  SVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 83

Query: 62  NKLESMEVTFSEE---------------------------GQ--------------REDD 121
           N+L S+E+ F +E                           G+              + +D
Sbjct: 84  NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMVEIRRRDVGETSRSGFALNLETRGKGND 143

Query: 122 LQGNQQYSNQRNQS-------SSKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIV 181
              N+  SN RN +       S + ++C+ Y K G+ KR C+  K+  ++  +  V+E +
Sbjct: 144 RNSNRGRSNSRNSNRNKSKSRSGQQVQCWNYGKTGHFKRQCKSPKKKNEDDSANAVIEEL 203

Query: 182 KEFLACVGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIG 241
           ++ L     N +D    WV+D+  S H + ++  + ++ +     V + +       G+G
Sbjct: 204 QDALLLAVDNPLDD---WVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSTLDVVGLG 263

Query: 242 NVVSFEPELSDSLELMKSRRQKSALRKHTIVGVVVKGEISRVATNLGGSAKSSE------ 288
           +V    P  + S+ L++  R    LR++ ++ V    +       +GG+ K ++      
Sbjct: 264 DVRITLP--NGSIWLLEKVRHIPDLRRN-LISVGQLDDEGHAILFVGGTWKVTKGARVLA 323

[Close]

BLAST of Moc11g29680 vs. NCBI nr
Match: CAN68388.1 (hypothetical protein VITISV_038864 [Vitis vinifera])

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-12
Identity = 83/343 (24.20%), Postives = 150/343 (43.73%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 24  SVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 83

Query: 62  NKLESMEVTFSEE---------------------------GQ--------------REDD 121
           N+L S+E+ F +E                           G+              + +D
Sbjct: 84  NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMVEIRRRDVGETSRSGFALNLETRGKGND 143

Query: 122 LQGNQQYSNQRNQS-------SSKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIV 181
              N+  SN RN +       S + ++C+ Y K G+ KR C+  K+  ++  +  V+E +
Sbjct: 144 RNSNRGRSNSRNSNRNKSKSRSGQQVQCWNYGKTGHFKRQCKSPKKKNEDDSANAVIEEL 203

Query: 182 KEFLACVGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIG 241
           ++ L     N +D    WV+D+  S H + ++  + ++ +     V + +       G+G
Sbjct: 204 QDALLLAVDNPLDD---WVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSTLDVVGLG 263

Query: 242 NVVSFEPELSDSLELMKSRRQKSALRKHTIVGVVVKGEISRVATNLGGSAKSSE------ 288
           +V    P  + S+ L++  R    LR++ ++ V    +       +GG+ K ++      
Sbjct: 264 DVRITLP--NGSIWLLEKVRHIPDLRRN-LISVGQLDDEGHAILFVGGTWKVTKGARVLA 323

[Close]

BLAST of Moc11g29680 vs. NCBI nr
Match: RVX13264.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-12
Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 70  SVAHNVVKEKTTADLMKALSGMYEKLSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129

Query: 62  NKLESMEVTFSEE-------------------GQREDDLQGNQQYSNQRNQS-------S 121
           N+L S+E+ F  E                     + ++   NQ  SN RN +       S
Sbjct: 130 NQLSSVEIDFDNEIRALIVLASLPNSWEAMRMAVKPNNRNSNQSRSNSRNSNRNRSKSRS 189

Query: 122 SKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIVKEFLACVGSNSIDRPSLWVVDT 172
            + ++C+   K G+ KR C+  K+  ++  +  V+E VK+ L     + +D    WV+D+
Sbjct: 190 GQQVQCWNCGKTGHFKRQCKSPKKKNEDDSANAVIEEVKDALLLAVDSPLDD---WVLDS 249

[Close]

BLAST of Moc11g29680 vs. NCBI nr
Match: KAE8732531.1 (Histidine kinase 5 [Hibiscus syriacus])

HSP 1 Score: 82.0 bits (201), Expect = 9.0e-12
Identity = 63/216 (29.17%), Postives = 107/216 (49.54%), Query Frame = 0


Query: 2    NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
            NVA  +A +KTT GLM AL++ YEK SA++KV+L+ R FN+ M EG  V  H+NE+  + 
Sbjct: 957  NVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTIT 1016

Query: 62   NKLESMEVTFSEEGQ----------------------REDDLQGNQQYSNQRNQSSSKDI 121
             +L S+E+ F +E +                      R+       +    ++++  KD 
Sbjct: 1017 TQLSSVEIEFDDEVRALILLSSLPDSWNATVTARKNFRKIFKSWQIKIQTGKSRTGKKDF 1076

Query: 122  ECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIVKEFLACVGSNSIDRPSLWVVDTTTSV 181
             C+   KKG+ KR CR LK+     +S NV E   + +    ++ I+    W++D+  S 
Sbjct: 1077 TCYNCGKKGHFKRDCRALKKDTGAQESANVTEETGDAMILSVNSPIES---WILDSGASF 1136

Query: 182  HVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIGNV 195
            H +  +  + ++ S     V + +D   K  G G++
Sbjct: 1137 HSTPCQEIMENYVSGDFGKVHLADDETLKIVGKGDI 1169

[Close]

BLAST of Moc11g29680 vs. NCBI nr
Match: RVW54736.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 79.0 bits (193), Expect = 7.7e-11
Identity = 84/341 (24.63%), Postives = 149/341 (43.70%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 70  SVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129

Query: 62  NKLESMEVTF-------------------------------------------SEEGQRE 121
           N+L S+E+ F                                           +EE +R 
Sbjct: 130 NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 189

Query: 122 DDLQGNQQYSNQRNQSSSK---DIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIVKE 181
           D  + N + SN RN+S S+    ++C+   K G+ KR C+  K+  ++  +  V E V++
Sbjct: 190 DAGRSNSRNSN-RNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKNEDDSANAVTEEVQD 249

Query: 182 FLACVGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIGNV 241
            L     + +D    WV+D+  S H + ++  + ++ +     V + +       G+G+V
Sbjct: 250 ALLLAVDSPLDD---WVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDV 309

Query: 242 VSFEPELSDSLELMKSRRQKSALRKHTIVGVVVKGEISRVATNLGGSAKSSE-------G 288
               P  + S+ L++  R    LR++ ++ V    +       +GG+ K ++       G
Sbjct: 310 RISLP--NGSVWLLEKVRHIPDLRRN-LISVGQLDDEGHAILFVGGTWKVTKGARVLARG 369

[Close]

BLAST of Moc11g29680 vs. ExPASy TrEMBL
Match: A0A438FVZ7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_204 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 83/343 (24.20%), Postives = 150/343 (43.73%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 24  SVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 83

Query: 62  NKLESMEVTFSEE---------------------------GQ--------------REDD 121
           N+L S+E+ F +E                           G+              + +D
Sbjct: 84  NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMVEIRRRDVGETSRSGFALNLETRGKGND 143

Query: 122 LQGNQQYSNQRNQS-------SSKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIV 181
              N+  SN RN +       S + ++C+ Y K G+ KR C+  K+  ++  +  V+E +
Sbjct: 144 RNSNRGRSNSRNSNRNKSKSRSGQQVQCWNYGKTGHFKRQCKSPKKKNEDDSANAVIEEL 203

Query: 182 KEFLACVGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIG 241
           ++ L     N +D    WV+D+  S H + ++  + ++ +     V + +       G+G
Sbjct: 204 QDALLLAVDNPLDD---WVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSTLDVVGLG 263

Query: 242 NVVSFEPELSDSLELMKSRRQKSALRKHTIVGVVVKGEISRVATNLGGSAKSSE------ 288
           +V    P  + S+ L++  R    LR++ ++ V    +       +GG+ K ++      
Sbjct: 264 DVRITLP--NGSIWLLEKVRHIPDLRRN-LISVGQLDDEGHAILFVGGTWKVTKGARVLA 323

[Close]

BLAST of Moc11g29680 vs. ExPASy TrEMBL
Match: A5BWL7 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_038864 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 83/343 (24.20%), Postives = 150/343 (43.73%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 24  SVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 83

Query: 62  NKLESMEVTFSEE---------------------------GQ--------------REDD 121
           N+L S+E+ F +E                           G+              + +D
Sbjct: 84  NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMVEIRRRDVGETSRSGFALNLETRGKGND 143

Query: 122 LQGNQQYSNQRNQS-------SSKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIV 181
              N+  SN RN +       S + ++C+ Y K G+ KR C+  K+  ++  +  V+E +
Sbjct: 144 RNSNRGRSNSRNSNRNKSKSRSGQQVQCWNYGKTGHFKRQCKSPKKKNEDDSANAVIEEL 203

Query: 182 KEFLACVGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIG 241
           ++ L     N +D    WV+D+  S H + ++  + ++ +     V + +       G+G
Sbjct: 204 QDALLLAVDNPLDD---WVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSTLDVVGLG 263

Query: 242 NVVSFEPELSDSLELMKSRRQKSALRKHTIVGVVVKGEISRVATNLGGSAKSSE------ 288
           +V    P  + S+ L++  R    LR++ ++ V    +       +GG+ K ++      
Sbjct: 264 DVRITLP--NGSIWLLEKVRHIPDLRRN-LISVGQLDDEGHAILFVGGTWKVTKGARVLA 323

[Close]

BLAST of Moc11g29680 vs. ExPASy TrEMBL
Match: A0A6A3CZB7 (Histidine kinase 5 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001825pilonHSYRG00013 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-12
Identity = 63/216 (29.17%), Postives = 107/216 (49.54%), Query Frame = 0


Query: 2    NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
            NVA  +A +KTT GLM AL++ YEK SA++KV+L+ R FN+ M EG  V  H+NE+  + 
Sbjct: 957  NVAFNIAKEKTTAGLMAALSSMYEKPSASNKVHLMRRLFNLRMTEGASVAQHLNELNTIT 1016

Query: 62   NKLESMEVTFSEEGQ----------------------REDDLQGNQQYSNQRNQSSSKDI 121
             +L S+E+ F +E +                      R+       +    ++++  KD 
Sbjct: 1017 TQLSSVEIEFDDEVRALILLSSLPDSWNATVTARKNFRKIFKSWQIKIQTGKSRTGKKDF 1076

Query: 122  ECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIVKEFLACVGSNSIDRPSLWVVDTTTSV 181
             C+   KKG+ KR CR LK+     +S NV E   + +    ++ I+    W++D+  S 
Sbjct: 1077 TCYNCGKKGHFKRDCRALKKDTGAQESANVTEETGDAMILSVNSPIES---WILDSGASF 1136

Query: 182  HVSSNKNWLSSFTS-QHDTVTMGNDIVSKGKGIGNV 195
            H +  +  + ++ S     V + +D   K  G G++
Sbjct: 1137 HSTPCQEIMENYVSGDFGKVHLADDETLKIVGKGDI 1169

[Close]

BLAST of Moc11g29680 vs. ExPASy TrEMBL
Match: A0A438JWC5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1668 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-12
Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 0


Query: 2   NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
           +VA  +  +KTT  LMKAL+  YEK SAN+KV+L+ + FN+ M E   V  H+NE   + 
Sbjct: 70  SVAHNVVKEKTTADLMKALSGMYEKLSANNKVHLMKKLFNLKMAENASVAQHLNEFNTIT 129

Query: 62  NKLESMEVTFSEE-------------------GQREDDLQGNQQYSNQRNQS-------S 121
           N+L S+E+ F  E                     + ++   NQ  SN RN +       S
Sbjct: 130 NQLSSVEIDFDNEIRALIVLASLPNSWEAMRMAVKPNNRNSNQSRSNSRNSNRNRSKSRS 189

Query: 122 SKDIECFYYHKKGYIKRFCRKLKQHQQNGDSTNVVEIVKEFLACVGSNSIDRPSLWVVDT 172
            + ++C+   K G+ KR C+  K+  ++  +  V+E VK+ L     + +D    WV+D+
Sbjct: 190 GQQVQCWNCGKTGHFKRQCKSPKKKNEDDSANAVIEEVKDALLLAVDSPLDD---WVLDS 249

[Close]

BLAST of Moc11g29680 vs. ExPASy TrEMBL
Match: A0A2N9INZ9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53782 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.7e-12
Identity = 70/236 (29.66%), Postives = 108/236 (45.76%), Query Frame = 0


Query: 2    NVASLMASQKTTMGLMKALTNRYEKSSANSKVYLITRYFNIHMEEGTLVNSHINEVIDLM 61
            ++A  +  + TT+GLM AL   YEK SAN+KV+L+ + FN+ M EG  V  H+NE   + 
Sbjct: 2055 SIAYNVVKETTTVGLMMALFGMYEKLSANNKVHLMKKLFNLKMAEGAAVAKHLNEFNTIT 2114

Query: 62   NKLESMEVTFSEE----------------------GQREDDLQGNQQYSNQRNQSSSKD- 121
            N+L S+E+ F +E                      G+  +  + ++   N R++S  K  
Sbjct: 2115 NQLSSVEIEFDDEIRALIVLAFLPNSWEAMRMANMGRSRNKWRNDRATFNDRSKSRDKSQ 2174

Query: 122  ----IECFYYHKKGYIKRFCRKLKQHQQNG---------------DSTNVVEIVKEFLAC 181
                 ECF+  KKG+I+  CR  ++ Q                  D   VV +  +   C
Sbjct: 2175 HTETRECFHCGKKGHIRMNCRHWRKEQTEDKDHKHDDEKGTIAVVDDEEVVVLSVQEQKC 2234

Query: 182  VGSNSIDRPSLWVVDTTTSVHVSSNKNWLSSF-TSQHDTVTMGNDIVSKGKGIGNV 195
               ++ID    WVVD+  + HV   K   +++      TV M N   SK  GIG+V
Sbjct: 2235 EHVDNID--DEWVVDSVATHHVVCTKELFTTYKVGDFGTVKMDNTSYSKIVGIGDV 2288

The following BLAST results are available for this feature:

BLAST of Moc11g29680 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW64114.1	2.4e-12	24.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN68388.1	2.4e-12	24.20	hypothetical protein VITISV_038864 [Vitis vinifera]	[more]
RVX13264.1	9.0e-12	29.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
KAE8732531.1	9.0e-12	29.17	Histidine kinase 5 [Hibiscus syriacus]	[more]
RVW54736.1	7.7e-11	24.63	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]

BLAST of Moc11g29680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g29680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438FVZ7	1.2e-12	24.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5BWL7	1.2e-12	24.20	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A6A3CZB7	4.4e-12	29.17	Histidine kinase 5 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001825pilonHSYRG...	[more]
A0A438JWC5	4.4e-12	29.08	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A2N9INZ9	5.7e-12	29.66	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53782 PE=4 SV=1	[more]

BLAST of Moc11g29680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 7..74 e-value: 1.3E-11 score: 44.4
None	No IPR available	GENE3D	4.10.60.10		coord: 73..129 e-value: 4.7E-5 score: 25.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..92
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 7..73
None	No IPR available	PANTHER	PTHR34676:SF1	ZINC FINGER, CCHC-TYPE, TUBBY C-TERMINAL-LIKE DOMAIN PROTEIN-RELATED	coord: 7..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g29680.1	Moc11g29680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0017111	nucleoside-triphosphatase activity
molecular_function	GO:0035639	purine ribonucleoside triphosphate binding
molecular_function	GO:0032555	purine ribonucleotide binding