Moc11g29500 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g29500
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 21522676 .. 21523492 (+)
RNA-Seq ExpressionMoc11g29500
SyntenyMoc11g29500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACCCCGTCAGAATGTCTGGGCTCCTCCTCCTACGAGGGTGGTAAAGATAAATACTGACGGGACTTGTGTACCGCTTAGAGATGATAAATCGACTGTTTTGGCTACTTTGGTTGATGTCGTCCCATGGAAAAGTCCTCAGATGGTGGAAATTGCTGCGATTCGTGAAGGGCTAAGACTTGCTTTGTGTTAGGGATTCTTCGGGTGATTGTGGAATCTGATTCGCTAAATACCATCAATCTGATTTGCGAAGACACATTTGCTCGAAATGAGACTGCAAATTGAATATCTGATATTCGGGCGTTGTCAAACTCCTTTGAGTTGGTGTCGTTTCACCATGTCTACAAAGAATCAAACTCTGCTGCTCATGCCCTAGCGAGGGAAAGTGTAAAGATGGGACGAGCGTTCTTATGGCTTTCTAATTTTCCCCTTTTTCTCAAACAGCAGGTTGAAGCTGATCTGAAAATTTTTGTAGCCGTAATGGCATATTGAGTTTTGTTTTAATGAATTCATTTTCTAAAAAAAAAAGATTGAGCACTCCGATGCTCAAATCAGTATCGAAATAAGTATCAAGGTATTTTTGTCAGGATTAACTTACCTGTGTGCTTACGTTTCGTCTTATAGGCAAGTCGGGAGAGCGTTGGCACATTTTCCTGTAATGCACATTGTAGATTGAGGGACGTCAAGGGATTACAGATAACTTTTAACCGCATTTATGTCCTTCCGTAGATCATGGTGACATAGGTCGGTTGGAGACTGGAGATACTTCCCTTTGTGTGCGTCCATCCCTTTGTCTACGTGATCGATCAGATTGA

mRNA sequence

ATGGTACCCCGTCAGAATGTCTGGGCTCCTCCTCCTACGAGGGTGGTAAAGATAAATACTGACGGGACTTGTGTACCGCTTAGAGATGATAAATCGACTGTTTTGGCTACTTTGGTTGATGTCGTCCCATGGAAAAGTCCTCAGATGGTGGAAATTGCTGCGATTCGTGAAGGGCTAAGACTTGCTTTGTATCATGGTGACATAGGTCGGTTGGAGACTGGAGATACTTCCCTTTGTGTGCGTCCATCCCTTTGTCTACGTGATCGATCAGATTGA

Coding sequence (CDS)

ATGGTACCCCGTCAGAATGTCTGGGCTCCTCCTCCTACGAGGGTGGTAAAGATAAATACTGACGGGACTTGTGTACCGCTTAGAGATGATAAATCGACTGTTTTGGCTACTTTGGTTGATGTCGTCCCATGGAAAAGTCCTCAGATGGTGGAAATTGCTGCGATTCGTGAAGGGCTAAGACTTGCTTTGTATCATGGTGACATAGGTCGGTTGGAGACTGGAGATACTTCCCTTTGTGTGCGTCCATCCCTTTGTCTACGTGATCGATCAGATTGA

Protein sequence

MVPRQNVWAPPPTRVVKINTDGTCVPLRDDKSTVLATLVDVVPWKSPQMVEIAAIREGLRLALYHGDIGRLETGDTSLCVRPSLCLRDRSD
Homology
[Close]
BLAST of Moc11g29500 vs. NCBI nr
Match: XP_022155289.1 (uncharacterized protein LOC111022426 [Momordica charantia])

HSP 1 Score: 57.0 bits (136), Expect = 9.8e-05
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 2   VPRQNVWAPPPTR-VVKINTD--------GTCVPLRDDKSTVLATLVDVVPWKSPQMVEI 61
           +PR N W PPP   VVK+NTD        G  V LRD  + ++A ++D    K+P + EI
Sbjct: 125 IPRVNAWRPPPLGCVVKMNTDAAVSTEGSGVGVLLRDGNAEIVAAMIDFHVVKTPLLTEI 184

Query: 62  AAIREGLRLA 63
            AIREGLRLA
Sbjct: 185 LAIREGLRLA 194

[Close]
BLAST of Moc11g29500 vs. ExPASy TrEMBL
Match: A0A6J1DPU1 (uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022426 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.8e-05
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 2   VPRQNVWAPPPTR-VVKINTD--------GTCVPLRDDKSTVLATLVDVVPWKSPQMVEI 61
           +PR N W PPP   VVK+NTD        G  V LRD  + ++A ++D    K+P + EI
Sbjct: 125 IPRVNAWRPPPLGCVVKMNTDAAVSTEGSGVGVLLRDGNAEIVAAMIDFHVVKTPLLTEI 184

Query: 62  AAIREGLRLA 63
            AIREGLRLA
Sbjct: 185 LAIREGLRLA 194

The following BLAST results are available for this feature:
BLAST of Moc11g29500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155289.19.8e-0547.14uncharacterized protein LOC111022426 [Momordica charantia][more]
BLAST of Moc11g29500 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g29500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DPU14.8e-0547.14uncharacterized protein LOC111022426 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Moc11g29500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g29500.1Moc11g29500.1mRNA