Moc11g29360 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g29360
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Reverse transcriptase domain-containing protein
Location	chr11: 21405538 .. 21414404 (-)
RNA-Seq Expression	Moc11g29360
Synteny	Moc11g29360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGCCGGTCGTCGTCGCTCCCTCTCCTATTGCCGTCGGCCTTTGCAGCTGCAGCCCGCCGTTGTCGTCGAAGCAGCTTCAAGTAAGCACTTTAGTTCCTTCTTTTGTTTTGTATTTCAATAACATAGTTGCACATTATGAGATTTCAATTCTTTGAACCCTTACCTTTGAGATTAGAAAAATATATGGTAGAAAAAAAGGTAACAACCCGACAACCCAACCCGAAATATTTGGGTTGTGTTTGGTTGGGTTGACCATCAATTTTAGACCCATCGATTCCCACATATGGCTAACCCGAAAATTCGGGTTGTTCCCAAAAATACCCCTAACCTAACCCAACCCAACCCGTGAACACCCCTAGATGGGAGATTAACATTAATTGCTAGTGTGCTCCATTTTAAAAAAGGGTCATAAGGAATTTTTGGTGGGAGGGTGTTGAGGAGGGTGTGTTGGAATTAATTCATATGTGGGTAATAAATTAAAGAGTAATTATATTTGAGCTATTTAATGGTCATATTAGTGATCTTGATTATGGGCCCATGATTTCCCATTCATTGGTGTGACTGCTGAGTAGAAACCAGCCCATTAATCTTAGGGGATTATGGAAACCTAGGATTAACTTATAAATAAATGGTTATGGTCCTCAATACACTTTGAGTCTCCCGTTTCCCATCAAACAACGAGTATTGCCCATATTTGGTCTGAGTTGCATAGTTGAAGAATACCACAAACTACAACTACTTACAGATGGTTCCAGGTAATTCTAGTATCTTATAGATTTTTGTTCTAGAATTTTATGGCTTTTCTAGAATAATTATGAATTAGGATTTCTTTAATTTTTCCAATAGGGTGGAGAATGTCATCTTGTTAGCAAGGAGGTTGATTCTAAGTGGTATAAGAAATTTGAGAGAGTAAGGAATTTGCTCTCTTTGTCAAGTGACTTTGGTGCTTTCCTTTAAATCCTAATACTTTGCGATATAGGATCATTGAGAACGAGTATGGCTATGAGTTCGGGGTGGGAACAATTACCTGTGGCTGTTAATATTGATTTAATAACGAGTTTCTTGCTGTCATTTATCTTATTGGACATCTTTTACTTGTTTTATTTTATGGCCTATTCTTCTTAAAGTAAACCCAACCCATCTAAGTCTAGGTCTTGTTTGACCCGAAATTGACTTGGCTTCGCCAAAAGGCCTCATCTCTAGAAGCCTGGCTCGCGAGGCGTCCAAGGCTCCTTGAAAGTCTTTCGGGGATTACCAGTTCCGGAGGAACAAGACAATTCGATTGGCTTCACTCCTTCTAGTAATAGGACAAGTCCACTTCACAAGTCCATTGGGCTGCCAAAGGCTAGCACAAGTGAGCGAAATAAACGACTCGCACACACTCCCCTTCCAAAAAAAACATCCTTGTTCGTTTTTGTTTAAGACACCCGAAGGAGAAAAAGAATAGAGATAGAGGAGAGCCACTTTGAGAGAGAGAGAGAGAGAGAGAGATCAAGCTACCGCCTCTACCCACCTTCGATTCCATCGACGTCACCTCTCACCGTGCCATCGGGGTTGGGTAGAAATCGACGCTGCTGCCTGATTGAACAAAAAACGACGCCGCCGTCGGAGTGGTCGTGCAACCGTAAGGTTCTTTGGCGATTTTGTTTAGATCAGGACTTGGATTCGGGGTAGATCTAAGCGTTGAGGTTGTATCTCTCTATCTTTAATGGTTCTTAACTATTCTTGAAGAGATTTACATGTGTTTGAGATTGCTTCTCAAATCTCTTCAAGATTTTGAGTAGAAGCTTTCTTGAATCGTAAATCTTGACTCTCTATTTTAGGATTTCGATTATGTTTTTGTTGTATATGCCTATCGTGTAATTGTAGATTTGATCTTTGTCGTTAATAATATAGACTCGTAGGGATATTATCTTTGCAAAGTGGATGTAGGTCCTATTTTTATGACTGAACGACTATAAATTTTGTGTCGATTCTCTATTTTACATTACTGTTAATTGCTGGAAATTATCTAAAGAATAATTGAAACGTTTCTGTGATTATTCGCCTCTTAGTTAGCATTTGTAAATACTCTTTTAGACTATAAAGAACTCATTAAACAAGAAAATTAAGAAAATTGATTATAGAATTTATATAAAATTGTAACAATTGGTATCAGAGCTTGGTATTCTCTTTATTGTGTAATCTGCATTCTTTTATTGCCTAAAAAGTACACTGTTTTGAATTTTACAGCATTATTAATATTTTGTAAATTCTTGTTAATATTCTGTAAATTCTTGTTAATATTCTGAAAATTATTAGAATATTCTTCCGAGGTACTGTCCATTCTTGTTTTTGTGTAGGATGAGTACTAAGTTCGAAGTGGAACATTTTGATGGTAAAGAAGACTTTGGTCTCTGGAAAATCAAAATGATGGCCTTGTTAAGGCAACAGAAAGTTGACTACGTGCTAATGGATCCTAAGAAAATTCCAGCAAGTGTCAATGATGACGAATGATCTTAAAGAAAAGGATAGGGTGGCGCCACTTGGCAGATAGTGTCATACGCCAAATGCTTTGTGAGGACACTATAAGTAAGTTTTGGGAAAGGTTAGAAACTACATATCAAGTAGCATCCATTTCAAATAAAAAATATATAAAATCTAGGTTCTTTAGTTTTAAAATGGAAACTAATAAAAACATGAAAGATAACCTAGATGAATTTAATAAAATAGTATTTGAAATGGAGAATATTGGTGAAACCTTTTCTAATGAAAATCATGCAATTATTTTAGTAAATTTTTTGCCTGATAGTTATAATGATGTTAAGTCTGCAATGAAGTATGGTAAATATGATCTAACGTCTGCTATTGTGATTAATGTCATTAAAATGAAAGAGTTAGAATTGAAGGATAGTAAAAATAATAATAGCAAGTCTTTGTTTGTTAGTGAGAGATCAAATAATAAGAAATCCCATAATAGGGGAAGAAGTAGAAACAGATCGAAGTCTAGGGAGCCTAGTCATACGAGGTGTTATAATTGTAATAAAGAAGGTCATATTAGGAGATTTTGTTCCAACCTTAGGAAGAATGGGGGTGGTAACCATAACCAAAACCAAAAGGGTAAAGGGAAAGAGGATAAGGATGTGGTCAACCTCGGTGAGGAGTATGAGGAGTATGAGGAGTATGACCATGTCCTTATAGTGAGTGAGCCTAGTGAGGATGAAACATGGATCATCATATTGTTCTTTCCATATGACACCAAATAGGGATTGGTTAGAGAACTTTAAAACCGGTACGAGGGGTAAAGCTATGCTAGAAAATCGTCATTTTTGTAATGTAGAGGCTCAATGCACAATTAGGCTTAAACTTCATGACAGAAAAATTAGACTTTTAATCGGTGTTAGGTATGTTCCAGAGGTTAAGAGGAATCTAATTTCAACTAGTATGCTTAATAAACTAGAATATACCATAAAATTTGAGAGTGGTATAGTTAAAGTCATGAAGGGGATTATGGTAGTGATGAGGGGGTACCTTAGAGAAACTTTATATTCATTAGATGGTTCGGTTGTTACGGGGTCAAGTGCCTTAGTTAAAGAATGTGTTAGTTCTCAAATTACTCTTTGGCATAAGCGTCTAGGTCACATGAGTGAATAAGGGTTAAGTGAGTTAGCTAAACAAAACCTTCTCCCTATTAATAAAAATGTAGACTTAGACATTTGTGAGCATTGCATATATGGTAAATCCAAGAGATTCAAATTTGGGAAGGTTATGCAGGTAACAAAAAGAAAGTTAGAGTATGTCCATGCTGACTTATGGGGACCATCTAGTGTAGCTACTAATGGTGGGGCTAATTATTTTTTATCCATAATTGATGATTGCACTAGGAAAGTGTGGGTTTATATTTTGAAAAATAAATCTGACACTTTTAATAAATTTGTTGAGTGGGTAAATCTTGTAGAAAATCAAACTAGCCTAAAAGTTAAGAAGCTTAGAACTGACAATGGCCTAGAGTTTTGTAATCATGAGTTTAATAATTACTGTAAGTCTATGGGCATAGTTAGACACTTGACAGTTGTAGGAACCCCCCAATTGAATGGGGTTGCTGAGAGAATGAACCGAACTCTAATGGAAAAAGTGAGGTGCATGTTGTTTAATGCATAGCTTCCCAAGAGTTTTTGGGGTGACAGTATGCTACATAGTTAATAGGAGCCTCGCCACTGCCGTAGGACTTTAAACATCTCAAGAACTTTGGCAAGGTAGTCCCCCTGATTTCACACACATGAAAGTCTTTGGGTGTTTAGCTTATGCTCATGCAAATGAGGGAAAGCTAGAACCTAGGGCTAAGAAATGTGTTTTCTTAGGATATCCTGAGGGAGTAAAGCGATATAAACTGTAGAGTCTAGATGTTGATAACCCTAAAATCATAATGAGTAGAGATATGATATTTGATGAAAATCAAATGGGATATGTGGAGAACAAAATCGATAGTAGCCCTAGTGACCCTATAGCCATAGAAACTGTTTTAGCCCTTTCTAGCTCTACTTCACAAAATGATCAAGTAGTTCAAACACATATAAAACGTGATACTACTACTATAGAACAAATACATACACAAGAAGTACAGCAAGATGAGGAGGTAGATGATGAGAACTTAACTGATTACCAACTAGCTAGGGATAGGAAACGTAGGCCTATTAGGCCACCCAATAGATATGGGTATGCAGACTTGATATCCTATGCCCTAGTTGTAGCTAATGAGTTTGTAAATCAAGAACCACAAACTTTTAATGAGGCCATTAATGATAAGAATAGTGAGAAATAGTGGGCCGTAATGAAAGAGGGGTTTGATTATTTAAAGAAAAATAAAACATGGGAACTTGTTAACAAACCATTAGAAGCTAAAACAGTGAGTTGTAGCTAAAATAGTCTTCGGGCTTGGAAGCGTCAAGCTAGATTGGGCCTAATCGTTGGTGTCAATGGATGCGAGCCCTTAGGTGGGAAGATGAAAGTAGGGAAAAACCTATTGGAGATGAAGAGTAGCCCATAAAGAAGGTTAGTTGAGGAAGGATCTGATAAGTGTGGGGAAGAAATAACTGATTTAACGGCGGTGGATGTATGTCAACCCCGCCGAGAATTATGAAAATTGTATGTTCGAATGTTCGCGGATTGGGGAATCCGACGGCATTCCGAGGTAAATGTGACTTTCTGAATCACTTAAATCCCCAAATGGTGTTCTTGACAGAAACAAAGTGTGACAAGTATGTATCAAATAATTTAAAGATAAAGCTTCAGTTTGAGGGTTGCTTCTCTGTTGATAGTAGTGGTGCAAGTGGCGGGCTGTGTTTGCTGTGGAGCTCTGAAGTTGAGGTGTCGATTCGTTCGTTTTCCCCAAATCATATTGATGCGGGGGGTGAAGTGGAGAGGCTATGACTGGCGGTTTACTGGGTTTTATGGGCATCCAAATGCTTCGAAAAGAGATATCACTTGGGAGCTGTTGAAGTGAGTTTATAACAATGATGATTCAGCTTGGTTGGTTTGGGGGGAGGGGATATGAATGAGATTTTGTGGGAGGAAGAGAAAGAAGGTGGCTGTTCTCGTCGACCGTCTTTGATTTTGGCATTTCGAAATGTTGTGGATGATTGTAGGCTTATGGAGATGGAGGTGGACGATGTTCCATTTACATGGAATAATAGACGTCAAAAGGAGGAGCAAATCAGGGATCGGTTAGACAGATTCTTATGTTACGAAGCTTTTTCTTCCTTGTTTCATGTGATACAAGTCCACAATCTAGATTGGGCGCATTCGAATCATAGAGCCACAACAGTGGAGGTCGAGGTTTCTACGGCTAGGAATAGGCGAAAGGGAGGGCCAAAACCTTTTCGGTTTGAAGAATTTTAAGCTGACGTCCGGAGTGCAAAGATATTATTAAGTCTGGAGGTAAGTGGATACATGATGAAGTAAATGGTAGGTCAATCCAGTACCATCTGTCAGAGTCGGCCAAGGCGCTTCGGTTGTGGGGGGTAAGGAGGTAAATAATAACATATTCGGCCAAATTAGGAGACTAAGGAATATGAAAAGCCTTTTCCTTTGAACTTTTCGATAATTCAATCGCTGGAGGCAGATTTAGATAAGGCGCTGGAAGATGAAGAAATATTTTGGAAGTAGAGATCTAGAGAGAATTGGCTCTAATGTGGAGATAAGAATTCTAAATGGTTTCATAAACAGGCTACTCTGAGGAAGAAATGAAATGCTATTAGAGGAATTTGTCTCTGATTGGTGGTTGGCTGGAGAGAGAAGAAGAGGTAGCCGATTGTTTTCGTCACCTACTTTAAAGATATTTTCTCAACCTCCAGGCCGAAGGAAGATGTTATTGAGAAGGTGATTGAGGTGATCAACCCAAAGGTGACTCCAGAGATGAACTCAATGTTGATGGCTCCTTATGATAAGAAAGAGGTGGAGGTAGCGATTAAAGAAATGAATCCAACAAAACCTCCGGGTCCCGATGGCTTCCCTGCTCTATTTTATCAGCGTTACTAGAGTATGGTGAGGTCGAAGACAATGGAGAATTGTCTTGAGGTGTTGAATAATAAGCCCAGCCTTGAAGGGTTGAATGATACTCACATCGTGTTGATACCGAAGGTAAATAATCCTCGTTATGTCACTGATTTTCATCCCATAAGTCTATGTAATGTGATGTATAAGATAATTTCAAAGGTGCTAGCAAATAAATTGAAGCGTGTGTTAAATGAGGTGATTTCGGAGGCCTATTTGGCCTTTATTCTAGGGAGGTCTATTCATGACAACATAATTATTGGGCATGAATGTTTGCATTATATTATGGGTAAGAAGACCGGTTTGGATGGTTTCGCAGCCTTAAATCTTGACTTGAGCAAGGCGTACGATCGGGTGGAATGGGTATTTTTGGAGAAAATCATGGCGAAGTTGGGTTTTGCCGATGGATGGGTGGAGAGAATTATGATGTGCCTTAGGTCGGTGTCCTTTGTAGTGGTTGTTAACGGCAAGCCATATGGGACTTTTACTCCTTCTAGGGATTTGCGGCAAGGGGATCCTACATCTCTCTACCTTTTTTTATTATGTACTGAAGGCCTTTCTATGCTAATGAAGGAAGTGTTGAGTAGGAGGCATGTCAGTGGGGTTTCAGTGGTTGAGAATAATCCCGTTATCTCCCACCTTTTGTTTGCAGATGACAAGTTGATGTTTGTGAAGGCTTATGCGAGGGAGTGTAGTTGCCTTGTGAAAGTTTTTAAAGAGTATGAATGGGAGTCGGGGCAGTGTATAAATTTCGAGAAGTTAATGGTATGCTTTTCCCCGAACATAAATGAGGATAGACAGGGATATCTATAATCAATTCTGGGAGTTCGTTTAGTTAACTCTTTGGGAACATATCTTAGGCTGCCTTCGTCTTTTACAAGAAAGAAATCAAATGATTGGATGTTCCTTAAAAATAGGGTGTGGAAGTGCTTGCAGGGGTGGAAGCGAAGTTTCTTTTCCATAATAGGAAAGGAAGTTCTAATAAAGAGCATTGGCAAGCTATCCCAACTTATTTTATGGGGGTGTTTCGTTTACCAAAAGGTTGTTGTGATGAGTTGATGAGATTGTTTGCAAAGTTTTGGTGAGGGTCTTCTGACATTAAAAAGAAAATTCATTGGATGAGATGGGAAAATTTGTGTTGGCCAAAAGAGTTGGGTGGTTTAAATTTTCGAGACTTAGAAGGTTTTAACCAAGCGCTCTTGGTGTTTGACAGCCCTAGATCTCTTGGTTTCTAAACTGCTCCGAGCAAAATACTTTCCTAATTCTACCTGTTTGAAGGTTGAGTTGGGGTTAAGACCTTCATACTTTTGGAAAAGCTTTATTTGGGGAAGAGAGTTGTTGGTTAAAGGCCTCCGTAGGAGAGTGGGAGATGGAAAGTCTATCAGAGCGTTTAGGGATGGTTGGTTGCCTAGGCTGTCTACGTTTAAACCTTTGGTGGTGCCTCCTTTATCTCAGGACCTTACAGTTGCGGACTTTATTCGGTCGGATAGGAGTTGGGATAATAATATGCTTCAGAATCGGTTTTGTCGAGAAGATGTGGATATAATTAGAAGATTACCGCTGTGACTGATGTTGACGGAGGACGGGTGGGTGTGGCACTATGATAAGAAGGGGGTCTTCAATGTCAATAGTGGATATAATTTTTTTATGCATCTTAAACTAGAATCTTCATCACTAAATTAGGAAGCCACTAAAAGATCGTGGAGAAATCTATGGAAACTTAGTATTCCGCCTAAAATTAAGCATTTTATATGGAAAGCGATAAACAATATTGTTCCTACAAGATGCAACCTAATCTTGAAGGGGTTAGCTATTGAGGATGTTTGCCCTATGTGTGGTAATGGTGGAGAGACGATTGAGCATACCTTGTTGACATGCAAGCGGGCACGCGAATTCTGGGAAGTGTGTTCTCCTAAGGTGAGGCAAAGAAAAGTGTTGCATGGTTCTTTGATGTCATTTTGGGAGCAGTTGGGCGACGTTATGTCGTTAGGTCAACGGGAGGTGGTGACAGTGGTGTGTTGGGTGATTTGGAATGATAGGAATAAACGGATTCAGAATCAACAAATTTGAGAACCGAGGATGAGAGAGGAGTGGATTCTTACGTACCTTGAGGCTTTTCAAAAAACAAAGGTCTGAAGTAGTGAACGTCCATTAAAGGCTTTAAATCCAATGGAAGTTAGGTTGTCCGATTTGCCCAAAGAGTGGTTCCGGGTGATGGTGGATGCGGCGTGTGCGACTTCAGTGCCGGTGTTAGGGTGGGTGTTGCTGTGTAGAATGGAGAAAATGCCCTTCAGAGGCAATTGCGCTGATCCATGGAGAGGGGCAGAATAG

mRNA sequence

ATGTTCGCCGGTCGTCGTCGCTCCCTCTCCTATTGCCGTCGGCCTTTGCAGCTGCAGCCCGCCGTTGTCGTCGAAGCAGCTTCAATTCCGGAGGAACAAGACAATTCGATTGGCTTCACTCCTTCTAGTAATAGGACAAGTCCACTTCACAAGTCCATTGGGCTGCCAAAGGCTAGCACAATAAATTTTTTGCCTGATAGTTATAATGATGTTAAGTCTGCAATGAAGTATGGTAAATATGATCTAACGTCTGCTATTGTGATTAATGTCATTAAAATGAAAGAGTTAGAATTGAAGGATAGTAAAAATAATAATAGCAAGTCTTTGTTTGTTAGTGAGAGATCAAATAATAAGAAATCCCATAATAGGGGAAGAAGTAGAAACAGATCGAAGTCTAGGGAGCCTAGTCATACGAGGTGTTATAATTGTAATAAAGAAGGTCATATTAGGAGATTTTGTTCCAACCTTAGGAAGAATGGGGGTGGTAACCATAACCAAAACCAAAAGGGTAAAGGGAAAGAGGATAAGGATGTGGTCAACCTCGGTGAGGAGTATGAGGAGTATGAGGAGTATGACCATGTCCTTATAGTGAGTGAGCCTAAAACAAAGTGTGACAAGTATGTATCAAATAATTTAAAGATAAAGCTTCAGTTTGAGGGTTGCTTCTCTGTTGATAGTAGTGGTGCAAGTGGCGGGCTGTGTTTGCTGTGGAGCTCTGAAGTTGAGGTCTTGGTTGGTTTGGGGGGAGGGGATATGAATGAGATTTTGTGGGAGGAAGAGAAAGAAGGTGGCTGTTCTCGTCGACCGTCTTTGATTTTGGCATTTCGAAATGTTGTGGATGATTGTAGGCTTATGGAGATGGAGGTGGACGATGTTCCATTTACATGGAATAATAGACGTCAAAAGGAGGAGCAAATCAGGGATCGGTTAGACAGATTCTTATGTTACGAAGCTTTTTCTTCCTTGTTTCATGTGATACAAGTCCACAATCTAGATTGGGCGCATTCGAATCATAGAGCCACAACAGTGGAGGTCGAGGTTTCTACGGCTAGGAATAGGCGAAAGGGAGGGCCAAAACCTTTTCGGTCAATCCAGTACCATCTGTCAGAGTCGGCCAAGGCGCTTCGGTTGTGGGGGGTAAGGAGGCCGAAGGAAGATGTTATTGAGAAGGTGATTGAGGTGATCAACCCAAAGGTGACTCCAGAGATGAACTCAATGTTGATGGCTCCTTATGATAAGAAAGAGGTGGAGGTTGAGTTGGGGTTAAGACCTTCATACTTTTGGAAAAGCTTTATTTGGGGAAGAGAGTTGTTGGTTAAAGGCCTCCGTAGGAGAGTGGGAGATGGAAAGTCTATCAGAGCGTTTAGGGATGGTTGGTTGCCTAGGCTGTCTACGTTTAAACCTTTGGTGGTGCCTCCTTTATCTCAGGACCTTACAGTTGCGGACTTTATTCGGTCGGATAGGAGTTGGGATAATAATATGCTTCAGAATCGGTTTTGTCGAGAAGATGTGGATATAATTAGAAGATTACCGCTATGCAACCTAATCTTGAAGGGGTTAGCTATTGAGGATGTTTGCCCTATGTGTGGTAATGGTGGAGAGACGATTGAGCATACCTTGTTGACATGCAAGCGGGCACGCGAATTCTGGGAAGTGTGTTCTCCTAAGGTGAGGCAAAGAAAAGTGTTGCATGGTTCTTTGATGTCATTTTGGGAGCAGTTGGGCGACGTTATGTCGTTAGGTCAACGGGAGGTGGTGACAGTGGCTTTAAATCCAATGGAAGTTAGGTTGTCCGATTTGCCCAAAGAGTGGTTCCGGGTGATGGTGGATGCGGCGTGTGCGACTTCAGTGCCGGTGTTAGGGTGGGTGTTGCTGTGTAGAATGGAGAAAATGCCCTTCAGAGGCAATTGCGCTGATCCATGGAGAGGGGCAGAATAG

Coding sequence (CDS)

ATGTTCGCCGGTCGTCGTCGCTCCCTCTCCTATTGCCGTCGGCCTTTGCAGCTGCAGCCCGCCGTTGTCGTCGAAGCAGCTTCAATTCCGGAGGAACAAGACAATTCGATTGGCTTCACTCCTTCTAGTAATAGGACAAGTCCACTTCACAAGTCCATTGGGCTGCCAAAGGCTAGCACAATAAATTTTTTGCCTGATAGTTATAATGATGTTAAGTCTGCAATGAAGTATGGTAAATATGATCTAACGTCTGCTATTGTGATTAATGTCATTAAAATGAAAGAGTTAGAATTGAAGGATAGTAAAAATAATAATAGCAAGTCTTTGTTTGTTAGTGAGAGATCAAATAATAAGAAATCCCATAATAGGGGAAGAAGTAGAAACAGATCGAAGTCTAGGGAGCCTAGTCATACGAGGTGTTATAATTGTAATAAAGAAGGTCATATTAGGAGATTTTGTTCCAACCTTAGGAAGAATGGGGGTGGTAACCATAACCAAAACCAAAAGGGTAAAGGGAAAGAGGATAAGGATGTGGTCAACCTCGGTGAGGAGTATGAGGAGTATGAGGAGTATGACCATGTCCTTATAGTGAGTGAGCCTAAAACAAAGTGTGACAAGTATGTATCAAATAATTTAAAGATAAAGCTTCAGTTTGAGGGTTGCTTCTCTGTTGATAGTAGTGGTGCAAGTGGCGGGCTGTGTTTGCTGTGGAGCTCTGAAGTTGAGGTCTTGGTTGGTTTGGGGGGAGGGGATATGAATGAGATTTTGTGGGAGGAAGAGAAAGAAGGTGGCTGTTCTCGTCGACCGTCTTTGATTTTGGCATTTCGAAATGTTGTGGATGATTGTAGGCTTATGGAGATGGAGGTGGACGATGTTCCATTTACATGGAATAATAGACGTCAAAAGGAGGAGCAAATCAGGGATCGGTTAGACAGATTCTTATGTTACGAAGCTTTTTCTTCCTTGTTTCATGTGATACAAGTCCACAATCTAGATTGGGCGCATTCGAATCATAGAGCCACAACAGTGGAGGTCGAGGTTTCTACGGCTAGGAATAGGCGAAAGGGAGGGCCAAAACCTTTTCGGTCAATCCAGTACCATCTGTCAGAGTCGGCCAAGGCGCTTCGGTTGTGGGGGGTAAGGAGGCCGAAGGAAGATGTTATTGAGAAGGTGATTGAGGTGATCAACCCAAAGGTGACTCCAGAGATGAACTCAATGTTGATGGCTCCTTATGATAAGAAAGAGGTGGAGGTTGAGTTGGGGTTAAGACCTTCATACTTTTGGAAAAGCTTTATTTGGGGAAGAGAGTTGTTGGTTAAAGGCCTCCGTAGGAGAGTGGGAGATGGAAAGTCTATCAGAGCGTTTAGGGATGGTTGGTTGCCTAGGCTGTCTACGTTTAAACCTTTGGTGGTGCCTCCTTTATCTCAGGACCTTACAGTTGCGGACTTTATTCGGTCGGATAGGAGTTGGGATAATAATATGCTTCAGAATCGGTTTTGTCGAGAAGATGTGGATATAATTAGAAGATTACCGCTATGCAACCTAATCTTGAAGGGGTTAGCTATTGAGGATGTTTGCCCTATGTGTGGTAATGGTGGAGAGACGATTGAGCATACCTTGTTGACATGCAAGCGGGCACGCGAATTCTGGGAAGTGTGTTCTCCTAAGGTGAGGCAAAGAAAAGTGTTGCATGGTTCTTTGATGTCATTTTGGGAGCAGTTGGGCGACGTTATGTCGTTAGGTCAACGGGAGGTGGTGACAGTGGCTTTAAATCCAATGGAAGTTAGGTTGTCCGATTTGCCCAAAGAGTGGTTCCGGGTGATGGTGGATGCGGCGTGTGCGACTTCAGTGCCGGTGTTAGGGTGGGTGTTGCTGTGTAGAATGGAGAAAATGCCCTTCAGAGGCAATTGCGCTGATCCATGGAGAGGGGCAGAATAG

Protein sequence

MFAGRRRSLSYCRRPLQLQPAVVVEAASIPEEQDNSIGFTPSSNRTSPLHKSIGLPKASTINFLPDSYNDVKSAMKYGKYDLTSAIVINVIKMKELELKDSKNNNSKSLFVSERSNNKKSHNRGRSRNRSKSREPSHTRCYNCNKEGHIRRFCSNLRKNGGGNHNQNQKGKGKEDKDVVNLGEEYEEYEEYDHVLIVSEPKTKCDKYVSNNLKIKLQFEGCFSVDSSGASGGLCLLWSSEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDVPFTWNNRRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARNRRKGGPKPFRSIQYHLSESAKALRLWGVRRPKEDVIEKVIEVINPKVTPEMNSMLMAPYDKKEVEVELGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPLVVPPLSQDLTVADFIRSDRSWDNNMLQNRFCREDVDIIRRLPLCNLILKGLAIEDVCPMCGNGGETIEHTLLTCKRAREFWEVCSPKVRQRKVLHGSLMSFWEQLGDVMSLGQREVVTVALNPMEVRLSDLPKEWFRVMVDAACATSVPVLGWVLLCRMEKMPFRGNCADPWRGAE

Homology

[Close]

BLAST of Moc11g29360 vs. NCBI nr
Match: KAF4349753.1 (hypothetical protein G4B88_029501, partial [Cannabis sativa])

HSP 1 Score: 120.9 bits (302), Expect = 3.9e-23
Identity = 85/273 (31.14%), Postives = 129/273 (47.25%), Query Frame = 0


Query: 233 LCLLWSSEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDV 292
           LC L   ++  L  + GGD NEIL   EK+GG  R  S +  F+  +D C L++M  D  
Sbjct: 51  LCRL--KDLFALPWICGGDFNEILSISEKKGGADRSLSAMAEFQQALDKCSLVDMGYDGQ 110

Query: 293 PFTWNNRRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARN 352
            FTW N+RQ    +++RLDRF C + +  LF    V   D+ HS+HR     +E +  R 
Sbjct: 111 CFTWLNKRQGAAHVQERLDRFCCNQDWHELFPSGNVCTGDFIHSDHRPVVATLE-NVVRV 170

Query: 353 RRKGGPKPFRSIQYHLSESA---KALRLWGVRRPKEDVIEKVIEVINPKVTPEMNSMLMA 412
           ++K   + FR   + L +        + W  +    +  E +I++               
Sbjct: 171 QKKDKKRGFRFETHWLKDEECHDIVHQSWAAQDGPLESQESIIDIFG------------- 230

Query: 413 PYDKKEVEVELGLRPSYFWKSFIWG---RELLVKGLRRRVGDGKSIRAFRDGWLPRLSTF 472
                     LG      W    +G   + LL  G+R+ VGDG+S+ AFRD W+PR  +F
Sbjct: 231 -----RCADRLGT-----WNKNKFGSIPKLLLNSGMRKVVGDGRSVNAFRDPWVPRPRSF 290

Query: 473 KPLVVPPLSQDLTVADFIRSDRSWDNNMLQNRF 500
           +P + P  ++ L V+DFI  D +WD   L   F
Sbjct: 291 RP-ISPAPTEGLMVSDFIGMDGAWDIPALSQYF 296

[Close]

BLAST of Moc11g29360 vs. NCBI nr
Match: KAF4386840.1 (hypothetical protein F8388_006795 [Cannabis sativa])

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-22
Identity = 83/269 (30.86%), Postives = 131/269 (48.70%), Query Frame = 0


Query: 250 GDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDVPFTWNNRRQKEEQIRDR 309
           GD NEI+   EK GG  R P ++  FR V+DDCRL++        TW N      +I +R
Sbjct: 632 GDFNEIVSLSEKIGGRDRLPGVMDGFREVIDDCRLIDFSSSKHELTWCN-EHSNSRIMER 691

Query: 310 LDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARNRRKGGPKPFRSIQYHLS 369
           LDR LC E + + F    +  LDW  S+HRA  V++ V    +  K G K  R  ++H  
Sbjct: 692 LDRGLCTEEWLTQFEGADISLLDWWESDHRALVVDMPV--RMDGAKCG-KSKRKTRFHFE 751

Query: 370 ESAKALRLWGVRRPKEDVIEKVIEVINPKVTP-----EMNSMLMA--PYDKKEVEVELGL 429
           E+      W       +++++V +  + +  P     ++N    A   ++KK+   + GL
Sbjct: 752 EA------WCQEEECAEIVDRVWQDSSGRGRPAAIRCKINKCGKAFHGWNKKK---KRGL 811

Query: 430 RPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPLVVPPLSQDLTVAD 489
                       ++++  G R R+G+G S+R   D WLPR  TFK    PPL + L V D
Sbjct: 812 N-----TEIERTKKIIQNGYRWRIGNGDSVRVLEDPWLPRPLTFKVYDKPPLPEQLYVVD 871

Query: 490 FIRSDRSWDNNMLQNRFCREDVDIIRRLP 512
             + + +WD   ++  F   D D+I ++P
Sbjct: 872 LKKPNGAWDAEFIRAVFNPTDADLILQMP 882

[Close]

BLAST of Moc11g29360 vs. NCBI nr
Match: KAF4363712.1 (hypothetical protein G4B88_030211, partial [Cannabis sativa])

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-20
Identity = 82/276 (29.71%), Postives = 131/276 (47.46%), Query Frame = 0


Query: 233 LCLLWSSEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDV 292
           LC L   ++  L  + GGD NEIL   EK+GG  R  S +  F+  +D C L++M  D  
Sbjct: 51  LCRL--KDLFALPWICGGDFNEILSITEKKGGADRSLSAMSEFQQALDKCSLVDMGYDGQ 110

Query: 293 PFTWNNRRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARN 352
            FTW N+RQ    +++RLDRF C + +  LF    V   D+ HS+HR     +E +  R 
Sbjct: 111 CFTWLNKRQGAAHVQERLDRFCCNQDWHDLFPSGNVCTGDFIHSDHRPVVATLE-NVVRV 170

Query: 353 RRKGGPKPFRSIQYHLSESA---KALRLWGVRRPKEDVIEKVIEVINPKVTPEMNSMLMA 412
           ++K   + FR   + L +        + W  +    +  + +I++          +  + 
Sbjct: 171 QKKDKKRGFRFETHWLKDEECHDIVHQSWSAQDGPLESQDSIIDIFG------RCADRLG 230

Query: 413 PYDKKEVEVELGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPL 472
            ++K     + G  P    ++         K L   + DG+S+ AFRD W+PR  +F+P 
Sbjct: 231 AWNKS----KFGSIPKLVRET--------QKQLDDLLRDGRSVDAFRDPWVPRPRSFRP- 290

Query: 473 VVPPLSQDLTVADFIRSDRSWDNNMLQNRFCREDVD 506
           + P  +  + V+DFI  D +WD   L   F R DVD
Sbjct: 291 ISPAPTDGIMVSDFIGMDGAWDIPTLSQYFLRLDVD 304

[Close]

BLAST of Moc11g29360 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 111.7 bits (278), Expect = 2.4e-20
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 423  RPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPLVVPPLSQDLTVAD 482
            + SYFWK F+WGR+LLVKGLR RVG+G +I+AF D WLPR +TFKPL     + D TVA 
Sbjct: 996  KSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVAS 1055

Query: 483  FIRSDRSWDNNMLQNRFCREDVDIIRRLPLCNLILK 519
            FI +D +WD   + + FC ED D+I  +P+ +  L+
Sbjct: 1056 FITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQ 1091

[Close]

BLAST of Moc11g29360 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-07
Identity = 40/100 (40.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 239 SEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDVPFTWNN 298
           S ++    L GGDMN ILW  E     S   S I AFRN++D C L +M      FTW N
Sbjct: 380 SNLDASPWLIGGDMNAILWNYEASYTSSYDTSQIEAFRNIMDACSLTDMGFKGGIFTWCN 439

Query: 299 RRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNH 339
            R   +Q+  RLDRFLC + F+ +F     H   W+++ H
Sbjct: 440 NRFAGDQLWKRLDRFLCNDTFNYVFPDASGH---WSNATH 476

HSP 2 Score: 111.3 bits (277), Expect = 3.1e-20
Identity = 100/403 (24.81%), Postives = 156/403 (38.71%), Query Frame = 0


Query: 219 EGCFSVDSSGASGGLCLLWSSEVEVLVG-------------------------------- 278
           E  +SVD  G SGGL L+W   +++ V                                 
Sbjct: 204 ENFYSVDRVGLSGGLLLMWKEGIQIRVDSSSVGHILARVVGNNFLPWSLTCFYGNSDASQ 263

Query: 279 -------------------LGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEM 338
                              L  GD NEI+   EK GG  R    +  FR V+DDCRL+  
Sbjct: 264 RRFSWELLRNIKREIHGPWLCVGDFNEIVSLAEKNGGRVRSAGAMEEFREVIDDCRLIYF 323

Query: 339 EVDDVPFTWNNRRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEV 398
             +    TW N  +    + +RLDR LC E +   F    +  LDW  S+H+   V++ +
Sbjct: 324 SSNKSDLTWCNGHE-SNTVMERLDRGLCNEEWLLSFDGADIQVLDWWESDHKPLVVDMPL 383

Query: 399 STARNRRKGGPKPFRSIQYHLSESAKALRLWGVRRPKEDVIEKVIEVINPKVTPEMNSML 458
               N+     K  R   +H  E+      W     +ED  ++++E    K   E + ++
Sbjct: 384 VNDENKEAKNTKKGR---FHFEEA------W----CEEDQCKEIVE----KNWREWDVVI 443

Query: 459 M-APYDKKEVEVELGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTF 518
               Y +K  EV   L          W R+             KS+R   D WLPR  TF
Sbjct: 444 SGGDYKRKTGEVGRALDS--------WNRK-----------KKKSVRVLEDPWLPRPLTF 503

Query: 519 KPLVVPPLSQDLTVADFIRSDRSWDNNMLQNRFCREDVDIIRRLPLCNLILKGLAI---- 564
           K    P L ++L V D  ++D  WD + +++ F   D ++I  +P  +   +   +    
Sbjct: 504 KVYDQPTLPENLYVTDLKQADGQWDESFIRSVFNTIDAELILAIPFSDWDFEDKILWHYS 563

[Close]

BLAST of Moc11g29360 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.5e-06
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 416 VEVELGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPL 470
           +E  +G RPSY W+S I GRELL +GL R +GDG   + + D W+   +   PL
Sbjct: 100 MECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of Moc11g29360 vs. ExPASy TrEMBL
Match: A0A7J6DUI7 (Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_029501 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-23
Identity = 85/273 (31.14%), Postives = 129/273 (47.25%), Query Frame = 0


Query: 233 LCLLWSSEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDV 292
           LC L   ++  L  + GGD NEIL   EK+GG  R  S +  F+  +D C L++M  D  
Sbjct: 51  LCRL--KDLFALPWICGGDFNEILSISEKKGGADRSLSAMAEFQQALDKCSLVDMGYDGQ 110

Query: 293 PFTWNNRRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARN 352
            FTW N+RQ    +++RLDRF C + +  LF    V   D+ HS+HR     +E +  R 
Sbjct: 111 CFTWLNKRQGAAHVQERLDRFCCNQDWHELFPSGNVCTGDFIHSDHRPVVATLE-NVVRV 170

Query: 353 RRKGGPKPFRSIQYHLSESA---KALRLWGVRRPKEDVIEKVIEVINPKVTPEMNSMLMA 412
           ++K   + FR   + L +        + W  +    +  E +I++               
Sbjct: 171 QKKDKKRGFRFETHWLKDEECHDIVHQSWAAQDGPLESQESIIDIFG------------- 230

Query: 413 PYDKKEVEVELGLRPSYFWKSFIWG---RELLVKGLRRRVGDGKSIRAFRDGWLPRLSTF 472
                     LG      W    +G   + LL  G+R+ VGDG+S+ AFRD W+PR  +F
Sbjct: 231 -----RCADRLGT-----WNKNKFGSIPKLLLNSGMRKVVGDGRSVNAFRDPWVPRPRSF 290

Query: 473 KPLVVPPLSQDLTVADFIRSDRSWDNNMLQNRF 500
           +P + P  ++ L V+DFI  D +WD   L   F
Sbjct: 291 RP-ISPAPTEGLMVSDFIGMDGAWDIPALSQYF 296

[Close]

BLAST of Moc11g29360 vs. ExPASy TrEMBL
Match: A0A7J6GWY1 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006795 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.2e-23
Identity = 83/269 (30.86%), Postives = 131/269 (48.70%), Query Frame = 0


Query: 250 GDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDVPFTWNNRRQKEEQIRDR 309
           GD NEI+   EK GG  R P ++  FR V+DDCRL++        TW N      +I +R
Sbjct: 632 GDFNEIVSLSEKIGGRDRLPGVMDGFREVIDDCRLIDFSSSKHELTWCN-EHSNSRIMER 691

Query: 310 LDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARNRRKGGPKPFRSIQYHLS 369
           LDR LC E + + F    +  LDW  S+HRA  V++ V    +  K G K  R  ++H  
Sbjct: 692 LDRGLCTEEWLTQFEGADISLLDWWESDHRALVVDMPV--RMDGAKCG-KSKRKTRFHFE 751

Query: 370 ESAKALRLWGVRRPKEDVIEKVIEVINPKVTP-----EMNSMLMA--PYDKKEVEVELGL 429
           E+      W       +++++V +  + +  P     ++N    A   ++KK+   + GL
Sbjct: 752 EA------WCQEEECAEIVDRVWQDSSGRGRPAAIRCKINKCGKAFHGWNKKK---KRGL 811

Query: 430 RPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPLVVPPLSQDLTVAD 489
                       ++++  G R R+G+G S+R   D WLPR  TFK    PPL + L V D
Sbjct: 812 N-----TEIERTKKIIQNGYRWRIGNGDSVRVLEDPWLPRPLTFKVYDKPPLPEQLYVVD 871

Query: 490 FIRSDRSWDNNMLQNRFCREDVDIIRRLP 512
             + + +WD   ++  F   D D+I ++P
Sbjct: 872 LKKPNGAWDAEFIRAVFNPTDADLILQMP 882

[Close]

BLAST of Moc11g29360 vs. ExPASy TrEMBL
Match: A0A7J6EZ57 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_030211 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-21
Identity = 82/276 (29.71%), Postives = 131/276 (47.46%), Query Frame = 0


Query: 233 LCLLWSSEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDV 292
           LC L   ++  L  + GGD NEIL   EK+GG  R  S +  F+  +D C L++M  D  
Sbjct: 51  LCRL--KDLFALPWICGGDFNEILSITEKKGGADRSLSAMSEFQQALDKCSLVDMGYDGQ 110

Query: 293 PFTWNNRRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNHRATTVEVEVSTARN 352
            FTW N+RQ    +++RLDRF C + +  LF    V   D+ HS+HR     +E +  R 
Sbjct: 111 CFTWLNKRQGAAHVQERLDRFCCNQDWHDLFPSGNVCTGDFIHSDHRPVVATLE-NVVRV 170

Query: 353 RRKGGPKPFRSIQYHLSESA---KALRLWGVRRPKEDVIEKVIEVINPKVTPEMNSMLMA 412
           ++K   + FR   + L +        + W  +    +  + +I++          +  + 
Sbjct: 171 QKKDKKRGFRFETHWLKDEECHDIVHQSWSAQDGPLESQDSIIDIFG------RCADRLG 230

Query: 413 PYDKKEVEVELGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPL 472
            ++K     + G  P    ++         K L   + DG+S+ AFRD W+PR  +F+P 
Sbjct: 231 AWNKS----KFGSIPKLVRET--------QKQLDDLLRDGRSVDAFRDPWVPRPRSFRP- 290

Query: 473 VVPPLSQDLTVADFIRSDRSWDNNMLQNRFCREDVD 506
           + P  +  + V+DFI  D +WD   L   F R DVD
Sbjct: 291 ISPAPTDGIMVSDFIGMDGAWDIPTLSQYFLRLDVD 304

[Close]

BLAST of Moc11g29360 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-20
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 423  RPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPLVVPPLSQDLTVAD 482
            + SYFWK F+WGR+LLVKGLR RVG+G +I+AF D WLPR +TFKPL     + D TVA 
Sbjct: 996  KSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVAS 1055

Query: 483  FIRSDRSWDNNMLQNRFCREDVDIIRRLPLCNLILK 519
            FI +D +WD   + + FC ED D+I  +P+ +  L+
Sbjct: 1056 FITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQ 1091

[Close]

BLAST of Moc11g29360 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-08
Identity = 40/100 (40.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 239 SEVEVLVGLGGGDMNEILWEEEKEGGCSRRPSLILAFRNVVDDCRLMEMEVDDVPFTWNN 298
           S ++    L GGDMN ILW  E     S   S I AFRN++D C L +M      FTW N
Sbjct: 380 SNLDASPWLIGGDMNAILWNYEASYTSSYDTSQIEAFRNIMDACSLTDMGFKGGIFTWCN 439

Query: 299 RRQKEEQIRDRLDRFLCYEAFSSLFHVIQVHNLDWAHSNH 339
            R   +Q+  RLDRFLC + F+ +F     H   W+++ H
Sbjct: 440 NRFAGDQLWKRLDRFLCNDTFNYVFPDASGH---WSNATH 476

HSP 2 Score: 102.4 bits (254), Expect = 7.0e-18
Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 425 SYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPLVVPPLSQDLTVADFI 484
           SYFWK FIWGR+LL+KGLR RVG+G +I  F D W+PR  +F+P+  P    D+ VAD I
Sbjct: 130 SYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPFGPYDVKVADLI 189

Query: 485 RSDRSWDNNMLQNRFCREDVDIIRRLPL 513
             +  WD +++   FC ED D+I  +P+
Sbjct: 190 NPNGQWDVHLISYIFCEEDRDLILSMPV 217

[Close]

BLAST of Moc11g29360 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 54.7 bits (130), Expect = 3.2e-07
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 416 VEVELGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWLPRLSTFKPL 470
           +E  +G RPSY W+S I GRELL +GL R +GDG   + + D W+   +   PL
Sbjct: 100 MECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPLPPL 153

[Close]

BLAST of Moc11g29360 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 2.1e-06
Identity = 34/100 (34.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 420 LGLRPSYFWKSFIWGRELLVKGLRRRVGDGKSIRAFRDGWL---PRLSTFKPLVVPP--- 479
           LG RPS+ WKS    +E+L +G R  VG+G+ I  +R  WL   P  +  +   VPP   
Sbjct: 103 LGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEY 162

Query: 480 --LSQDLTVADFI-RSDRSWDNNMLQNRFCREDVDIIRRL 511
             +S  L V+D I  S R W  ++++  F   +  +I  L
Sbjct: 163 ASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGEL 202

The following BLAST results are available for this feature:

BLAST of Moc11g29360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4349753.1	3.9e-23	31.14	hypothetical protein G4B88_029501, partial [Cannabis sativa]	[more]
KAF4386840.1	1.5e-22	30.86	hypothetical protein F8388_006795 [Cannabis sativa]	[more]
KAF4363712.1	1.4e-20	29.71	hypothetical protein G4B88_030211, partial [Cannabis sativa]	[more]
XP_022158377.1	2.4e-20	52.08	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_022158377.1	1.0e-07	40.00	uncharacterized protein LOC111024874 [Momordica charantia]	[more]

BLAST of Moc11g29360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	4.5e-06	44.44	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Moc11g29360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6DUI7	1.9e-23	31.14	Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_029501 PE...	[more]
A0A7J6GWY1	7.2e-23	30.86	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006795 PE=4 SV=1	[more]
A0A7J6EZ57	6.8e-21	29.71	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_030211 PE=4 SV=1	[more]
A0A6J1DX30	1.2e-20	52.08	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DX30	5.0e-08	40.00	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc11g29360 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00310.1	3.2e-07	44.44	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G29090.1	2.1e-06	34.00	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 139..155 e-value: 0.0034 score: 26.5
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 139..155 score: 9.520856
None	No IPR available	GENE3D	4.10.60.10		coord: 112..205 e-value: 2.0E-5 score: 26.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..140
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 121..162
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 249..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g29360.1	Moc11g29360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding