Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTACTTTCTCACCGGCTTGGCTGATGAGACCCTTACTGTCAAACTTGGAGATGAGGCTCCAACTACCTTTGCCGAGGTCCTACAAAAGGTGAAGAAAGTTATCGATGGGCAAGAACTTCTCCAGACAAAGACTGGCCGACCAGAGAGGAAGATCGACCAGAAGAAGTCCATTCAAGACAAGAGTAAGGCTGATTCCAAGTCCAAGGACAAGGGATCATCCTCCTCCAACAACCGAACTGATTTTCGTAGGTCGGATGGGGGTTTTAGCCGAGGCTAACCCTACGAACGCTATACTCCAACCACAATCCCTATCTCAGAAATACTTAAAATATCGAAGAAACTGGGATGGAGAAGCTACTCAAGCGACCTGAGAAGCTTCGAGGGGACCCGGAGAAACACAATAAAGATAAATACTGCCGTTTTCACCGTGATCACGGCCATAATACGTCAAGTTGCTGGAACTAAAATGCCAGATTGAAGACCTCATTTAGGACGGCTACTTCAAAAAGTTCGTAGGCAAACCGAGGTCCAACTCGGTAGAGAAGAAAGATGAAAGGAAGCGTTCAAGGACGCCACCTCATCGAGATGACCGAGCTGCCAGGCGCGAGGTATGCGTCATTAGGGAGCAGAAACCGACCTGCTCCATTATCTTCACTGACTCCAACCTGGAAGGGGTCCACTTGCTCCATAATGATGCACTTGTGATCGCACATCTCATCGATCACGTCCTGGTTCGAAGAGTGTTAGTGGACGGGGGTGCATCTGCCAATATTCTATCTCTGACAACGTTCCTTGCTCTGAGATGGACCAGGACACAGTTGAGGAAGAGTCCAACACCCTTGGTTGGATTTTCTTGA
mRNA sequence
ATGTGCTACTTTCTCACCGGCTTGGCTGATGAGACCCTTACTGTCAAACTTGGAGATGAGGCTCCAACTACCTTTGCCGAGGTCCTACAAAAGGTGAAGAAAGTTATCGATGGGCAAGAACTTCTCCAGACAAAGACTGGCCGACCAGAGAGGAAGATCGACCAGAAGAAGTCCATTCAAGACAAGAGTAAGGCTGATTCCAAGTCCAAGGACAAGGGATCATCCTCCTCCAACAACCGAACTGATTTTCGCAAACCGAGGTCCAACTCGGTAGAGAAGAAAGATGAAAGGAAGCGTTCAAGGACGCCACCTCATCGAGATGACCGAGCTGCCAGGCGCGAGGTATGCGTCATTAGGGAGCAGAAACCGACCTGCTCCATTATCTTCACTGACTCCAACCTGGAAGGGGTCCACTTGCTCCATAATGATGCACTTGTGATCGCACATCTCATCGATCACGTCCTGGTTCGAAGAGTGTTAGTGGACGGGGGTGCATCTGCCAATATTCTATCTCTGACAACGTTCCTTGCTCTGAGATGGACCAGGACACAGTTGAGGAAGAGTCCAACACCCTTGGTTGGATTTTCTTGA
Coding sequence (CDS)
ATGTGCTACTTTCTCACCGGCTTGGCTGATGAGACCCTTACTGTCAAACTTGGAGATGAGGCTCCAACTACCTTTGCCGAGGTCCTACAAAAGGTGAAGAAAGTTATCGATGGGCAAGAACTTCTCCAGACAAAGACTGGCCGACCAGAGAGGAAGATCGACCAGAAGAAGTCCATTCAAGACAAGAGTAAGGCTGATTCCAAGTCCAAGGACAAGGGATCATCCTCCTCCAACAACCGAACTGATTTTCGCAAACCGAGGTCCAACTCGGTAGAGAAGAAAGATGAAAGGAAGCGTTCAAGGACGCCACCTCATCGAGATGACCGAGCTGCCAGGCGCGAGGTATGCGTCATTAGGGAGCAGAAACCGACCTGCTCCATTATCTTCACTGACTCCAACCTGGAAGGGGTCCACTTGCTCCATAATGATGCACTTGTGATCGCACATCTCATCGATCACGTCCTGGTTCGAAGAGTGTTAGTGGACGGGGGTGCATCTGCCAATATTCTATCTCTGACAACGTTCCTTGCTCTGAGATGGACCAGGACACAGTTGAGGAAGAGTCCAACACCCTTGGTTGGATTTTCTTGA
Protein sequence
MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQDKSKADSKSKDKGSSSSNNRTDFRKPRSNSVEKKDERKRSRTPPHRDDRAARREVCVIREQKPTCSIIFTDSNLEGVHLLHNDALVIAHLIDHVLVRRVLVDGGASANILSLTTFLALRWTRTQLRKSPTPLVGFS
Homology
BLAST of Moc11g29160 vs. NCBI nr
Match:
XP_022156088.1 (uncharacterized protein LOC111023060 [Momordica charantia])
HSP 1 Score: 265.8 bits (678), Expect = 3.0e-67
Identity = 157/221 (71.04%), Postives = 171/221 (77.38%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
MCYFLTGLADET TVKLG+EA TFAEVLQ KK IDGQELL+TKT RPE++IDQKKS Q
Sbjct: 272 MCYFLTGLADETPTVKLGEEALATFAEVLQMEKKFIDGQELLRTKTDRPEKQIDQKKSSQ 331
Query: 61 DKSKADSKSKDKGSSSSNNRTDFRKPRSNSVEKKDERKRSRTPPHRDD------------ 120
DK KADSKSKDKGSSSSN+RTD+ RSNSVEKK+ERKRSRTPP DD
Sbjct: 332 DKRKADSKSKDKGSSSSNSRTDY--CRSNSVEKKEERKRSRTPPRLDDRPAVINTIFGGP 391
Query: 121 -------------RAARREVCVIREQKPTCSIIFTDSNLEGVHLLHNDALVIAHLIDHVL 180
R A REVC+IREQ+PTCS+ F DS+LEGVHL +NDALVIA LIDHVL
Sbjct: 392 SGGQSGNKRKELAREASREVCIIREQRPTCSVTFDDSDLEGVHLPYNDALVIAPLIDHVL 451
Query: 181 VRRVLVDGGASANILSLTTFLALRWTRTQLRKSPTPLVGFS 197
VRRVLVDGGASANILS LAL WTR+QL+KSPTPLVGFS
Sbjct: 452 VRRVLVDGGASANILS----LALGWTRSQLKKSPTPLVGFS 486
BLAST of Moc11g29160 vs. NCBI nr
Match:
XP_022150385.1 (uncharacterized protein LOC111018561 [Momordica charantia])
HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 157/240 (65.42%), Postives = 172/240 (71.67%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
MCYFLTGLADETLTVKLG+EAP TFAEVLQK KKVIDGQELL+TKTGRPE++IDQKK Q
Sbjct: 124 MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQ 183
Query: 61 DKSKADSKSKDKGSSSSNNRTD--------------------FRKPRSNSVEKKDERKRS 120
+K K DSK KDKGSSSS +R D KPR NSVEKK+ERKRS
Sbjct: 184 EKRKVDSKPKDKGSSSSVSRIDCWELKRQIEDLIQDGYFKKFVGKPRFNSVEKKEERKRS 243
Query: 121 RTPPHRDD-------------------------RAARREVCVIREQKPTCSIIFTDSNLE 180
RTPP RDD R ARREV +IREQ+ TCSI F D++LE
Sbjct: 244 RTPPRRDDRPAVINTIFGGPSGGQSGNKRKELVREARREVFIIREQRSTCSITFDDTDLE 303
Query: 181 GVHLLHNDALVIAHLIDHVLVRRVLVDGGASANILSLTTFLALRWTRTQLRKSPTPLVGF 196
GVHL HNDALVI LI+HVLVRRVLVDGGASANILSL T+LAL WTR+QL+KSPTPLVGF
Sbjct: 304 GVHLPHNDALVITPLINHVLVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVGF 363
BLAST of Moc11g29160 vs. NCBI nr
Match:
XP_022156024.1 (uncharacterized protein LOC111022993 [Momordica charantia])
HSP 1 Score: 248.8 bits (634), Expect = 3.8e-62
Identity = 160/308 (51.95%), Postives = 177/308 (57.47%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
MCYFLTGLADETLTVKLG+EAP TF EVLQK KKVI GQELL+TKT R ER+IDQKK+ Q
Sbjct: 1 MCYFLTGLADETLTVKLGEEAPATFVEVLQKAKKVIYGQELLRTKTSRLERQIDQKKTNQ 60
Query: 61 DKSKADSKSKDKGSSSSNNRTDFR------------------------------------ 120
++ K DSKSKDKGSSSS RT++R
Sbjct: 61 ERRKVDSKSKDKGSSSSGGRTEYRRSKIGPSRSRLYERYTPTTIPISEILTNIEENGMEN 120
Query: 121 -------------------------------------------------------KPRSN 180
KPRSN
Sbjct: 121 LLKRHEKLQGDPQKRHKDKYCCFHRDHGHNTSNCWELKGQIEDLIQDGYFKKFVGKPRSN 180
Query: 181 SVEKKDERKRSRTPPHRDD---------------------RAARREVCVIREQKPTCSII 197
SVEKK+ERKRSRTPP RDD R A+REVC+IR+QKPTCSI
Sbjct: 181 SVEKKEERKRSRTPPRRDDRPAIINTIFGGQSGNKRKELAREAKREVCIIRDQKPTCSIT 240
BLAST of Moc11g29160 vs. NCBI nr
Match:
XP_022155139.1 (uncharacterized protein LOC111022280 [Momordica charantia])
HSP 1 Score: 245.4 bits (625), Expect = 4.2e-61
Identity = 151/248 (60.89%), Postives = 168/248 (67.74%), Query Frame = 0
Query: 10 DETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQDKSKADSKS 69
DETLTVKLG+EAP TFAEVLQ KKVIDGQELL+TKT RPE++IDQK+ Q K K DSKS
Sbjct: 231 DETLTVKLGEEAPATFAEVLQNAKKVIDGQELLRTKTDRPEKQIDQKRLSQKKRKDDSKS 290
Query: 70 KDKGSSSSNNRTDFR------------------------------------KPRSNSVEK 129
KDKGSSSS +RT++R KPRSNSVEK
Sbjct: 291 KDKGSSSSGSRTEYRRSESGPSRSRPYERCWELKRQIEDLIQDSYFKKFVGKPRSNSVEK 350
Query: 130 KDERKRSRTPPHRDDR-------------------------AARREVCVIREQKPTCSII 189
K+ERKRSRTPP R+DR ARR+V +IREQKPTCSI
Sbjct: 351 KEERKRSRTPPRREDRPAVINTIFGGPSGGQFENKRKELACEARRKVSIIREQKPTCSIT 410
Query: 190 FTDSNLEGVHLLHNDALVIAHLIDHVLVRRVLVDGGASANILSLTTFLALRWTRTQLRKS 197
F D++LEGVHL HNDALVIA LIDHVLVRRVLVDGGASANILSL T+LALR TR+QL+KS
Sbjct: 411 FKDTDLEGVHLPHNDALVIAPLIDHVLVRRVLVDGGASANILSLPTYLALRGTRSQLKKS 470
BLAST of Moc11g29160 vs. NCBI nr
Match:
XP_022154846.1 (uncharacterized protein LOC111022006 [Momordica charantia])
HSP 1 Score: 244.6 bits (623), Expect = 7.2e-61
Identity = 154/298 (51.68%), Postives = 176/298 (59.06%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
M YFL GLADETLT++LG+EAP TFAEVLQK KKVIDGQELL+TKTGRPE+++DQKK Q
Sbjct: 1 MSYFLIGLADETLTIRLGEEAPVTFAEVLQKAKKVIDGQELLRTKTGRPEKQVDQKKPGQ 60
Query: 61 DKSKADSKSKDKGSSSSNNRTDFR------------------------------------ 120
K +AD +SKDKG SSS++RT++R
Sbjct: 61 VKWRADVRSKDKGPSSSSSRTEYRRTESGPTRSRPFERYTPTTIPISEMLTNIEESGMEK 120
Query: 121 -----------------------------------------KPRSNSVEKKDERKRSRTP 180
KPRSNSVEKK+ERKRSRTP
Sbjct: 121 LLKRPEKLRGDPEKCNKDNCWELKRQIEELIQDGYFKKFVGKPRSNSVEKKEERKRSRTP 180
Query: 181 PHRDDRAA-------------------------RREVCVIREQKPTCSIIFTDSNLEGVH 197
P RDDR A RREVC+IREQKPTC I F D++LEGVH
Sbjct: 181 PRRDDRPAVINTIFGGPSGGQFGNKRNKLARGTRREVCIIREQKPTCPITFGDADLEGVH 240
BLAST of Moc11g29160 vs. ExPASy TrEMBL
Match:
A0A6J1DPN4 (uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023060 PE=4 SV=1)
HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67
Identity = 157/221 (71.04%), Postives = 171/221 (77.38%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
MCYFLTGLADET TVKLG+EA TFAEVLQ KK IDGQELL+TKT RPE++IDQKKS Q
Sbjct: 272 MCYFLTGLADETPTVKLGEEALATFAEVLQMEKKFIDGQELLRTKTDRPEKQIDQKKSSQ 331
Query: 61 DKSKADSKSKDKGSSSSNNRTDFRKPRSNSVEKKDERKRSRTPPHRDD------------ 120
DK KADSKSKDKGSSSSN+RTD+ RSNSVEKK+ERKRSRTPP DD
Sbjct: 332 DKRKADSKSKDKGSSSSNSRTDY--CRSNSVEKKEERKRSRTPPRLDDRPAVINTIFGGP 391
Query: 121 -------------RAARREVCVIREQKPTCSIIFTDSNLEGVHLLHNDALVIAHLIDHVL 180
R A REVC+IREQ+PTCS+ F DS+LEGVHL +NDALVIA LIDHVL
Sbjct: 392 SGGQSGNKRKELAREASREVCIIREQRPTCSVTFDDSDLEGVHLPYNDALVIAPLIDHVL 451
Query: 181 VRRVLVDGGASANILSLTTFLALRWTRTQLRKSPTPLVGFS 197
VRRVLVDGGASANILS LAL WTR+QL+KSPTPLVGFS
Sbjct: 452 VRRVLVDGGASANILS----LALGWTRSQLKKSPTPLVGFS 486
BLAST of Moc11g29160 vs. ExPASy TrEMBL
Match:
A0A6J1D8C0 (uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018561 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 7.2e-67
Identity = 157/240 (65.42%), Postives = 172/240 (71.67%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
MCYFLTGLADETLTVKLG+EAP TFAEVLQK KKVIDGQELL+TKTGRPE++IDQKK Q
Sbjct: 124 MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQ 183
Query: 61 DKSKADSKSKDKGSSSSNNRTD--------------------FRKPRSNSVEKKDERKRS 120
+K K DSK KDKGSSSS +R D KPR NSVEKK+ERKRS
Sbjct: 184 EKRKVDSKPKDKGSSSSVSRIDCWELKRQIEDLIQDGYFKKFVGKPRFNSVEKKEERKRS 243
Query: 121 RTPPHRDD-------------------------RAARREVCVIREQKPTCSIIFTDSNLE 180
RTPP RDD R ARREV +IREQ+ TCSI F D++LE
Sbjct: 244 RTPPRRDDRPAVINTIFGGPSGGQSGNKRKELVREARREVFIIREQRSTCSITFDDTDLE 303
Query: 181 GVHLLHNDALVIAHLIDHVLVRRVLVDGGASANILSLTTFLALRWTRTQLRKSPTPLVGF 196
GVHL HNDALVI LI+HVLVRRVLVDGGASANILSL T+LAL WTR+QL+KSPTPLVGF
Sbjct: 304 GVHLPHNDALVITPLINHVLVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPLVGF 363
BLAST of Moc11g29160 vs. ExPASy TrEMBL
Match:
A0A6J1DS14 (uncharacterized protein LOC111022993 OS=Momordica charantia OX=3673 GN=LOC111022993 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 1.8e-62
Identity = 160/308 (51.95%), Postives = 177/308 (57.47%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
MCYFLTGLADETLTVKLG+EAP TF EVLQK KKVI GQELL+TKT R ER+IDQKK+ Q
Sbjct: 1 MCYFLTGLADETLTVKLGEEAPATFVEVLQKAKKVIYGQELLRTKTSRLERQIDQKKTNQ 60
Query: 61 DKSKADSKSKDKGSSSSNNRTDFR------------------------------------ 120
++ K DSKSKDKGSSSS RT++R
Sbjct: 61 ERRKVDSKSKDKGSSSSGGRTEYRRSKIGPSRSRLYERYTPTTIPISEILTNIEENGMEN 120
Query: 121 -------------------------------------------------------KPRSN 180
KPRSN
Sbjct: 121 LLKRHEKLQGDPQKRHKDKYCCFHRDHGHNTSNCWELKGQIEDLIQDGYFKKFVGKPRSN 180
Query: 181 SVEKKDERKRSRTPPHRDD---------------------RAARREVCVIREQKPTCSII 197
SVEKK+ERKRSRTPP RDD R A+REVC+IR+QKPTCSI
Sbjct: 181 SVEKKEERKRSRTPPRRDDRPAIINTIFGGQSGNKRKELAREAKREVCIIRDQKPTCSIT 240
BLAST of Moc11g29160 vs. ExPASy TrEMBL
Match:
A0A6J1DPC9 (uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022280 PE=4 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 2.0e-61
Identity = 151/248 (60.89%), Postives = 168/248 (67.74%), Query Frame = 0
Query: 10 DETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQDKSKADSKS 69
DETLTVKLG+EAP TFAEVLQ KKVIDGQELL+TKT RPE++IDQK+ Q K K DSKS
Sbjct: 231 DETLTVKLGEEAPATFAEVLQNAKKVIDGQELLRTKTDRPEKQIDQKRLSQKKRKDDSKS 290
Query: 70 KDKGSSSSNNRTDFR------------------------------------KPRSNSVEK 129
KDKGSSSS +RT++R KPRSNSVEK
Sbjct: 291 KDKGSSSSGSRTEYRRSESGPSRSRPYERCWELKRQIEDLIQDSYFKKFVGKPRSNSVEK 350
Query: 130 KDERKRSRTPPHRDDR-------------------------AARREVCVIREQKPTCSII 189
K+ERKRSRTPP R+DR ARR+V +IREQKPTCSI
Sbjct: 351 KEERKRSRTPPRREDRPAVINTIFGGPSGGQFENKRKELACEARRKVSIIREQKPTCSIT 410
Query: 190 FTDSNLEGVHLLHNDALVIAHLIDHVLVRRVLVDGGASANILSLTTFLALRWTRTQLRKS 197
F D++LEGVHL HNDALVIA LIDHVLVRRVLVDGGASANILSL T+LALR TR+QL+KS
Sbjct: 411 FKDTDLEGVHLPHNDALVIAPLIDHVLVRRVLVDGGASANILSLPTYLALRGTRSQLKKS 470
BLAST of Moc11g29160 vs. ExPASy TrEMBL
Match:
A0A6J1DPX9 (uncharacterized protein LOC111022006 OS=Momordica charantia OX=3673 GN=LOC111022006 PE=4 SV=1)
HSP 1 Score: 244.6 bits (623), Expect = 3.5e-61
Identity = 154/298 (51.68%), Postives = 176/298 (59.06%), Query Frame = 0
Query: 1 MCYFLTGLADETLTVKLGDEAPTTFAEVLQKVKKVIDGQELLQTKTGRPERKIDQKKSIQ 60
M YFL GLADETLT++LG+EAP TFAEVLQK KKVIDGQELL+TKTGRPE+++DQKK Q
Sbjct: 1 MSYFLIGLADETLTIRLGEEAPVTFAEVLQKAKKVIDGQELLRTKTGRPEKQVDQKKPGQ 60
Query: 61 DKSKADSKSKDKGSSSSNNRTDFR------------------------------------ 120
K +AD +SKDKG SSS++RT++R
Sbjct: 61 VKWRADVRSKDKGPSSSSSRTEYRRTESGPTRSRPFERYTPTTIPISEMLTNIEESGMEK 120
Query: 121 -----------------------------------------KPRSNSVEKKDERKRSRTP 180
KPRSNSVEKK+ERKRSRTP
Sbjct: 121 LLKRPEKLRGDPEKCNKDNCWELKRQIEELIQDGYFKKFVGKPRSNSVEKKEERKRSRTP 180
Query: 181 PHRDDRAA-------------------------RREVCVIREQKPTCSIIFTDSNLEGVH 197
P RDDR A RREVC+IREQKPTC I F D++LEGVH
Sbjct: 181 PRRDDRPAVINTIFGGPSGGQFGNKRNKLARGTRREVCIIREQKPTCPITFGDADLEGVH 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DPN4 | 1.5e-67 | 71.04 | uncharacterized protein LOC111023060 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1D8C0 | 7.2e-67 | 65.42 | uncharacterized protein LOC111018561 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DS14 | 1.8e-62 | 51.95 | uncharacterized protein LOC111022993 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DPC9 | 2.0e-61 | 60.89 | uncharacterized protein LOC111022280 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DPX9 | 3.5e-61 | 51.68 | uncharacterized protein LOC111022006 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
Match Name | E-value | Identity | Description | |