Moc11g28630 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g28630
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 20889862 .. 20890140 (-)
RNA-Seq ExpressionMoc11g28630
SyntenyMoc11g28630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCATCCAGCAAACTCTGCCAATAAGACAGAACAGAGGGGTGTGAACGCTGATAATGGCCCTCAGCGAGACCTCGGTGCAAGAATAGTCGAGGACCAGGTCCGAGCAGGGCAAGAGGGAGATCTGCCGCGTAGATTTGCCCGCCATGCGAACCAAGAGCTACCACCTGCTCACCCGAAACCCTCAAAAGCCAACAGAGGCCGAGGAGGGACGTCGAGAAAGACCTCCCAAAGGGCCAACCAGGCAGCAGACCCTGAAGCTCTTTCTACTCTCTAG

mRNA sequence

ATGGTGCATCCAGCAAACTCTGCCAATAAGACAGAACAGAGGGGTGTGAACGCTGATAATGGCCCTCAGCGAGACCTCGGTGCAAGAATAGTCGAGGACCAGGTCCGAGCAGGGCAAGAGGGAGATCTGCCGCGTAGATTTGCCCGCCATGCGAACCAAGAGCTACCACCTGCTCACCCGAAACCCTCAAAAGCCAACAGAGGCCGAGGAGGGACGTCGAGAAAGACCTCCCAAAGGGCCAACCAGGCAGCAGACCCTGAAGCTCTTTCTACTCTCTAG

Coding sequence (CDS)

ATGGTGCATCCAGCAAACTCTGCCAATAAGACAGAACAGAGGGGTGTGAACGCTGATAATGGCCCTCAGCGAGACCTCGGTGCAAGAATAGTCGAGGACCAGGTCCGAGCAGGGCAAGAGGGAGATCTGCCGCGTAGATTTGCCCGCCATGCGAACCAAGAGCTACCACCTGCTCACCCGAAACCCTCAAAAGCCAACAGAGGCCGAGGAGGGACGTCGAGAAAGACCTCCCAAAGGGCCAACCAGGCAGCAGACCCTGAAGCTCTTTCTACTCTCTAG

Protein sequence

MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVRAGQEGDLPRRFARHANQELPPAHPKPSKANRGRGGTSRKTSQRANQAADPEALSTL
Homology
BLAST of Moc11g28630 vs. NCBI nr
Match: XP_022156638.1 (uncharacterized protein LOC111023488 [Momordica charantia])

HSP 1 Score: 80.5 bits (197), Expect = 8.4e-12
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVRAGQEGDLPRRFARHANQELPPAHP 60
          MV P  SAN  E+R +N +N  Q +L A++ E+Q +AGQE D PRR  R+AN  LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 KPSKANRGRGG 72
          +  KANRGRGG
Sbjct: 61 RSGKANRGRGG 71

BLAST of Moc11g28630 vs. NCBI nr
Match: XP_022149377.1 (uncharacterized protein LOC111017807 [Momordica charantia])

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-08
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQ 35
          MVHPANSAN TEQRGVNADNGPQRDLGARIVEDQ
Sbjct: 1  MVHPANSANTTEQRGVNADNGPQRDLGARIVEDQ 34

BLAST of Moc11g28630 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 3.3e-08
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVRAGQEGDLPRRFARHANQELPPAHP 60
          MV P +S N  ++R + A++G QR++GA +VE Q+  G   +   R AR    +L PAHP
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 KPSKANRGRGGTSRKTSQRANQAADPEALSTL 93
          KP KANRGRGG SR+T+  A  A   E    L
Sbjct: 61 KPFKANRGRGGASRRTTLGAAPAPSRENFDAL 92

BLAST of Moc11g28630 vs. NCBI nr
Match: XP_022142768.1 (uncharacterized protein LOC111012806 [Momordica charantia])

HSP 1 Score: 60.8 bits (146), Expect = 6.9e-06
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVR 37
          MV PANSAN TE+RG+NADNGPQRDL AR VEDQ+R
Sbjct: 1  MVQPANSANTTERRGLNADNGPQRDLDARTVEDQLR 36

BLAST of Moc11g28630 vs. NCBI nr
Match: XP_022148920.1 (uncharacterized protein LOC111017470 [Momordica charantia])

HSP 1 Score: 60.5 bits (145), Expect = 9.0e-06
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQ---VRAGQEGDLPRRFA 49
          MVHPANSAN TE+RGVNADNG QRDL  R+VEDQ   V+ G+E   P  FA
Sbjct: 1  MVHPANSANTTERRGVNADNGTQRDLDTRMVEDQTLTVKLGEEA--PATFA 49

BLAST of Moc11g28630 vs. ExPASy TrEMBL
Match: A0A6J1DR60 (uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023488 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-12
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVRAGQEGDLPRRFARHANQELPPAHP 60
          MV P  SAN  E+R +N +N  Q +L A++ E+Q +AGQE D PRR  R+AN  LPPAHP
Sbjct: 1  MVQPIESANTAERRALNGNNDAQHELDAKVTEEQTKAGQEVDPPRRSTRNANTILPPAHP 60

Query: 61 KPSKANRGRGG 72
          +  KANRGRGG
Sbjct: 61 RSGKANRGRGG 71

BLAST of Moc11g28630 vs. ExPASy TrEMBL
Match: A0A6J1D7S8 (uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017807 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQ 35
          MVHPANSAN TEQRGVNADNGPQRDLGARIVEDQ
Sbjct: 1  MVHPANSANTTEQRGVNADNGPQRDLGARIVEDQ 34

BLAST of Moc11g28630 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVRAGQEGDLPRRFARHANQELPPAHP 60
          MV P +S N  ++R + A++G QR++GA +VE Q+  G   +   R AR    +L PAHP
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 KPSKANRGRGGTSRKTSQRANQAADPEALSTL 93
          KP KANRGRGG SR+T+  A  A   E    L
Sbjct: 61 KPFKANRGRGGASRRTTLGAAPAPSRENFDAL 92

BLAST of Moc11g28630 vs. ExPASy TrEMBL
Match: A0A6J1CP40 (uncharacterized protein LOC111012806 OS=Momordica charantia OX=3673 GN=LOC111012806 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-06
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQVR 37
          MV PANSAN TE+RG+NADNGPQRDL AR VEDQ+R
Sbjct: 1  MVQPANSANTTERRGLNADNGPQRDLDARTVEDQLR 36

BLAST of Moc11g28630 vs. ExPASy TrEMBL
Match: A0A6J1D4A4 (uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017470 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.4e-06
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0

Query: 1  MVHPANSANKTEQRGVNADNGPQRDLGARIVEDQ---VRAGQEGDLPRRFA 49
          MVHPANSAN TE+RGVNADNG QRDL  R+VEDQ   V+ G+E   P  FA
Sbjct: 1  MVHPANSANTTERRGVNADNGTQRDLDTRMVEDQTLTVKLGEEA--PATFA 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156638.18.4e-1256.34uncharacterized protein LOC111023488 [Momordica charantia][more]
XP_022149377.12.5e-0897.06uncharacterized protein LOC111017807 [Momordica charantia][more]
XP_022159327.13.3e-0844.57uncharacterized protein LOC111025738 [Momordica charantia][more]
XP_022142768.16.9e-0680.56uncharacterized protein LOC111012806 [Momordica charantia][more]
XP_022148920.19.0e-0666.67uncharacterized protein LOC111017470 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DR604.1e-1256.34uncharacterized protein LOC111023488 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1D7S81.2e-0897.06uncharacterized protein LOC111017807 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DZJ11.6e-0844.57uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1CP403.3e-0680.56uncharacterized protein LOC111012806 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1D4A44.4e-0666.67uncharacterized protein LOC111017470 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g28630.1Moc11g28630.1mRNA