Moc11g28210 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g28210
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Enzymatic polyprotein
Location	chr11: 20582390 .. 20584898 (-)
RNA-Seq Expression	Moc11g28210
Synteny	Moc11g28210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACTACCTGGGGAGAAATGGTGCGATCATTTCGAGACGACGGGGTGGCTGGTTGTTTTGCGGCGGGCCGCTGAGTGTTTGGCCACCTTCGACCAGGATGAGGTTCCATCGGGAGGAGGAGAGAAGGATGTGCTCAGGGTTGATTTGGGTGTCTTCAAGAGATGTTCTCTTGAGAGGTAGTCAGCAAGGGAGTTCCCACTTCCTTTTATAGGCACAATTTGAAAATCGAAGCAAGACAATATTGCCTGCCATCTTGCAAAGATTTGCTTTGAGACCAGATTCTTTACATCTTTTTCAAAGATGAATTTGCTTGCCTTTGAATCTGTCCGGATCGTGAAATCTTTATTGATAAGATCTCCTTGGAATTTTTGTACGCAAAGTACTATTGCTAATACTTCATTCTTTACTGTGTAATAGTTTTTCTTGGCACTATTCCAAATGCCTAAATGGTAACGAATAATCATGATTTTCTCGTTAACTTCCTATTTGAGTACACCGTCGTAACCGATATTTGATGCATCGGTGTCGACAAGAATCTGTACTTGATCATCCACAAGAGATAAACATGAGATGCTCTTGGCCAGGGATTTGATAGATTGGACTGCGCGTGTATGCTCTACAGTCCATGGCTTTGGATTTTTCTTCAACCTGTTATAGAGTGGCAGGCAGATTGTACGGAGGTCTTTAATAAAGTCTCAAATATAATTCACACAGCCCAAAAATCGTTGTAGCTGTGTTTTGTCTTGTATAACATCTGGGAATTTATCAACAAATTGCAAAGACCGTTGGATCGACTTAATGATTCCTTGATTGATATCATAATCGAGAAATCTGACCTTTGTTTGGAACAGTTTGATTTTTCGAATTTGATCAGTATTTCCTCTTGCGCCAAGGAAATTCAGGATCCTTTGACTTACTCTTGCTAAAGAGTCGTTTGTTGGAATATTTCTTTCTTTTCTTCCTTTCATCTTTGGGTCCGTAGTCAAGATCATATTGTTTGCAGAAAGTTCCCAATTCCTTACGGTAGTCGGGATCTTTGATAACTTTGGTAGTATGCTTATTCTCTAGGTAGAGATTAACGCATATCCCTGGAACTATGACAGTAATATCCCCAATGGTTAACTCTGACCAGTTGATCTGATTGGTTGTAGAGTTTGCTGCTGCCACTTGATAGAATCTTTGAGCAATGTAATGCGGAAGTCCTTCAACAAATTTTTGTTTCCAGATATCTACTCTGCATGACGTAATAGTATAAAGACGTATTAGGAATGTGTCTTTATACCATTTATAGTTGCTTATCTTTCAACATCGGAGTCCTAGTAGAGGTTCGGTACCGAGGTCGATATGGATTTTAGTGCTGCCAACAAAATTCTTCGTCATTGCATAAACTAATTGATTTACCATGTCCGGTTCTTCAATTTGCATGACATTTTGTCCTTCTTGTTTGACAATAGTCTTGTCAAGATTTTTTATGTATCCTCTTCTGTGAGCTGGTTATGCCACCAACTTCTTAGGTTTCCAGAGAGACCTGAGTGTAATCCGTCTTTTTGGTGCTGAAAGTTGTAGCGGCCATCATCATTTCCTGAAAAGTATTCAGCATTTGAGCTTCAGAATATCCGTCGATATTCCAGGTAACTATTGATGTTTCGTCATAGGCTCGTTAATCATGGCGGAGATCGTCCCAGCCTAGATCAGGAGAAGATGGTTGAGGATAAACGTAGTTGCTACAATACCTACAACGACTCAAGCCTCATCTTCAACAATTCTACCAGTAACTATGCATACGGAAATGATGTCGAAGCTCTATTAGGACTCCGATGTTGAAAGATGAGCAACTACAAATGGTATAAAGACACATTCCTAACACGTCTTTATACTATTACGTCATGCGGAGCAGATATCTAGAAACAAAAATTTGTTGAAGGACTTCCGCATTACATTGCTCAAAGATTCTATCAAGTGGCAGCAGCAAACTCTACAACCAATCAGATCAATTGGTCAGAGTTAACCATTTGGGACATTACTACCACAGTTCAAGAGATATGCGTTAATATCTGCCTAGAGAATAAGCATACTACCAAAGTTATCAAAGATCCCGACTACCGTAAGGAATTGGGAACTTTCTGCAAACAATACGATCTTGACTACGGACCTAAAGATGAAAGGAAGAAAAGAAAGAAATCTTCCAACAAACGACTCTTTAGCAAGAGTAAGTCAAAGGATCCCGAATTTCCTCGGCGCAAGAGGAAATACTACAACAGGAGCAAGGGTAAGGGGAATTATTCGAAGTTCAACATTCATACCATCTTTTCCAACAAAGTATCTACTCATCCCCCTTACTAAGATGTTTAGATTCGCTTTGTATTTCCAAGTTCCATGGATCTTCTGTTGGAATTTCCAGCTAGGACCCAGTGGCAATTCCAAAGTGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAATTTTGACTACTCCTACCTAGAAGCTGAAAAGATAAAAATCTAG

mRNA sequence

ATGCTACTACCTGGGGAGAAATGGTGCGATCATTTCGAGACGACGGGGTGGCTGGTTGTTTTGCGGCGGGCCGCTGAGTGTTTGGCCACCTTCGACCAGGATGAGGTTCCATCGGGAGGAGGAGAGAAGGATGTGCTCAGGGTTGATTTGGGTGTCTTCAAGAGATGTTCTCTTGAGAGGCTCGTTAATCATGGCGGAGATCGTCCCAGCCTAGATCAGGAGAAGATGGTTGAGGATAAACGTAGTTGCTACAATACCTACAACGACTCAAGCCTCATCTTCAACAATTCTACCAGTAACTATGCATACGGAAATGATGTCGAAGCTCTATTAGGACTCCGATTTCAAGAGATATGCGTTAATATCTGCCTAGAGAATAAGCATACTACCAAAGTTATCAAAGATCCCGACTACCGTAAGGAATTGGGAACTTTCTGCAAACAATACGATCTTGACTACGGACCTAAAGATGAAAGGAAGAAAAGAAAGAAATCTTCCAACAAACGACTCTTTAGCAAGAGTAAGTCAAAGGATCCCGAATTTCCTCGGCGCAAGAGGAAATACTACAACAGGAGCAAGGGACCCAGTGGCAATTCCAAAGTGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAATTTTGACTACTCCTACCTAGAAGCTGAAAAGATAAAAATCTAG

Coding sequence (CDS)

ATGCTACTACCTGGGGAGAAATGGTGCGATCATTTCGAGACGACGGGGTGGCTGGTTGTTTTGCGGCGGGCCGCTGAGTGTTTGGCCACCTTCGACCAGGATGAGGTTCCATCGGGAGGAGGAGAGAAGGATGTGCTCAGGGTTGATTTGGGTGTCTTCAAGAGATGTTCTCTTGAGAGGCTCGTTAATCATGGCGGAGATCGTCCCAGCCTAGATCAGGAGAAGATGGTTGAGGATAAACGTAGTTGCTACAATACCTACAACGACTCAAGCCTCATCTTCAACAATTCTACCAGTAACTATGCATACGGAAATGATGTCGAAGCTCTATTAGGACTCCGATTTCAAGAGATATGCGTTAATATCTGCCTAGAGAATAAGCATACTACCAAAGTTATCAAAGATCCCGACTACCGTAAGGAATTGGGAACTTTCTGCAAACAATACGATCTTGACTACGGACCTAAAGATGAAAGGAAGAAAAGAAAGAAATCTTCCAACAAACGACTCTTTAGCAAGAGTAAGTCAAAGGATCCCGAATTTCCTCGGCGCAAGAGGAAATACTACAACAGGAGCAAGGGACCCAGTGGCAATTCCAAAGTGTTGAGCAAAGCTTTACGCATCAAATGGTGGGAAAATTTTGACTACTCCTACCTAGAAGCTGAAAAGATAAAAATCTAG

Protein sequence

MLLPGEKWCDHFETTGWLVVLRRAAECLATFDQDEVPSGGGEKDVLRVDLGVFKRCSLERLVNHGGDRPSLDQEKMVEDKRSCYNTYNDSSLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKDPDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKGPSGNSKVLSKALRIKWWENFDYSYLEAEKIKI

Homology

[Close]

BLAST of Moc11g28210 vs. NCBI nr
Match: KAA0066178.1 (hypothetical protein E6C27_scaffold21G001880 [Cucumis melo var. makuwa] >TYK15218.1 hypothetical protein E5676_scaffold790G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 2.4e-28
Identity = 65/78 (83.33%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 116 QEICVNICLENKHTTKVIKDPDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSK 175
           Q IC+N+C+ENKHTTKVIKD +YRKELG FCK+Y LD GPKDERKKR+KSSNKRLFSKSK
Sbjct: 404 QAICINLCIENKHTTKVIKDSNYRKELGIFCKEYGLDKGPKDERKKRRKSSNKRLFSKSK 463

Query: 176 SKDPEFPRRKRKYYNRSK 194
           SKDPEFPRRKRKYYN++K
Sbjct: 464 SKDPEFPRRKRKYYNKNK 481

[Close]

BLAST of Moc11g28210 vs. NCBI nr
Match: XP_022151716.1 (uncharacterized protein LOC111019629 [Momordica charantia])

HSP 1 Score: 135.6 bits (340), Expect = 5.4e-28
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 91  SLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKDPDYRKELGTFCKQYD 150
           +++ N++T+   +       +    Q+ICVN+CLENKHT KVIK+PDYRKELGTFCKQY 
Sbjct: 333 TVVTNSTTNRIDWAELTIGDINATIQQICVNLCLENKHTAKVIKEPDYRKELGTFCKQYG 392

Query: 151 LDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKGPSGNSK 201
           LD   ++ERKK+KKSSNKRLFSKSKSKD E PRRKRKYYNR+KG    SK
Sbjct: 393 LDDRSEEERKKKKKSSNKRLFSKSKSKDSELPRRKRKYYNRNKGKKDYSK 442

[Close]

BLAST of Moc11g28210 vs. NCBI nr
Match: TYK01213.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-27
Identity = 74/134 (55.22%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 79  DKRSCYNT---YNDSSLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKD 138
           D+R    T   + D+S+  N+ T    +       +    Q IC+N+C ENKHTTKVIKD
Sbjct: 806 DRRGARRTREGHMDASVATNSVTKQIDWAELTYGDISATIQAICINLCTENKHTTKVIKD 865

Query: 139 PDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKG- 198
            DYRKELGTFCKQY L  GPK+E+KK+KKSS+KRLFS+SK+KDPEFPRRKRKYYN+ K  
Sbjct: 866 FDYRKELGTFCKQYSLSQGPKEEKKKKKKSSSKRLFSRSKAKDPEFPRRKRKYYNKGKRH 925

Query: 199 -PSGNSKVLSKALR 208
            PS  + V  K  R
Sbjct: 926 YPSKTNNVCFKCNR 939

[Close]

BLAST of Moc11g28210 vs. NCBI nr
Match: KAA0066201.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-27
Identity = 74/134 (55.22%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 79  DKRSCYNT---YNDSSLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKD 138
           D+R    T   + D+S+  N+ T    +       +    Q IC+N+C ENKHTTKVIKD
Sbjct: 851 DRRGARRTREGHMDASVATNSVTKQIDWAELTYGDISATIQAICINLCTENKHTTKVIKD 910

Query: 139 PDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKG- 198
            DYRKELGTFCKQY L  GPK+E+KK+KKSS+KRLFS+SK+KDPEFPRRKRKYYN+ K  
Sbjct: 911 FDYRKELGTFCKQYSLSQGPKEEKKKKKKSSSKRLFSRSKAKDPEFPRRKRKYYNKGKRH 970

Query: 199 -PSGNSKVLSKALR 208
            PS  + V  K  R
Sbjct: 971 YPSKTNNVCFKCNR 984

[Close]

BLAST of Moc11g28210 vs. NCBI nr
Match: KAA0038280.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 8.1e-24
Identity = 58/78 (74.36%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 116 QEICVNICLENKHTTKVIKDPDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSK 175
           Q IC+N+  ENKHTTKVIKD DYRKELGTFCKQYDLD GPK+E+KK+++ S+KRLFS+SK
Sbjct: 438 QAICINLYTENKHTTKVIKDFDYRKELGTFCKQYDLDKGPKEEKKKKRQFSSKRLFSRSK 497

Query: 176 SKDPEFPRRKRKYYNRSK 194
           +KDPEF +RKRKYYN++K
Sbjct: 498 AKDPEFSQRKRKYYNKNK 515

[Close]

BLAST of Moc11g28210 vs. ExPASy TrEMBL
Match: A0A5A7VEN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00970 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28
Identity = 65/78 (83.33%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 116 QEICVNICLENKHTTKVIKDPDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSK 175
           Q IC+N+C+ENKHTTKVIKD +YRKELG FCK+Y LD GPKDERKKR+KSSNKRLFSKSK
Sbjct: 404 QAICINLCIENKHTTKVIKDSNYRKELGIFCKEYGLDKGPKDERKKRRKSSNKRLFSKSK 463

Query: 176 SKDPEFPRRKRKYYNRSK 194
           SKDPEFPRRKRKYYN++K
Sbjct: 464 SKDPEFPRRKRKYYNKNK 481

[Close]

BLAST of Moc11g28210 vs. ExPASy TrEMBL
Match: A0A6J1DFI7 (uncharacterized protein LOC111019629 OS=Momordica charantia OX=3673 GN=LOC111019629 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-28
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 91  SLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKDPDYRKELGTFCKQYD 150
           +++ N++T+   +       +    Q+ICVN+CLENKHT KVIK+PDYRKELGTFCKQY 
Sbjct: 333 TVVTNSTTNRIDWAELTIGDINATIQQICVNLCLENKHTAKVIKEPDYRKELGTFCKQYG 392

Query: 151 LDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKGPSGNSK 201
           LD   ++ERKK+KKSSNKRLFSKSKSKD E PRRKRKYYNR+KG    SK
Sbjct: 393 LDDRSEEERKKKKKSSNKRLFSKSKSKDSELPRRKRKYYNRNKGKKDYSK 442

[Close]

BLAST of Moc11g28210 vs. ExPASy TrEMBL
Match: A0A5A7VKK8 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002180 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28
Identity = 74/134 (55.22%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 79  DKRSCYNT---YNDSSLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKD 138
           D+R    T   + D+S+  N+ T    +       +    Q IC+N+C ENKHTTKVIKD
Sbjct: 851 DRRGARRTREGHMDASVATNSVTKQIDWAELTYGDISATIQAICINLCTENKHTTKVIKD 910

Query: 139 PDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKG- 198
            DYRKELGTFCKQY L  GPK+E+KK+KKSS+KRLFS+SK+KDPEFPRRKRKYYN+ K  
Sbjct: 911 FDYRKELGTFCKQYSLSQGPKEEKKKKKKSSSKRLFSRSKAKDPEFPRRKRKYYNKGKRH 970

Query: 199 -PSGNSKVLSKALR 208
            PS  + V  K  R
Sbjct: 971 YPSKTNNVCFKCNR 984

[Close]

BLAST of Moc11g28210 vs. ExPASy TrEMBL
Match: A0A5D3BN76 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75441G00050 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.8e-28
Identity = 74/134 (55.22%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 79  DKRSCYNT---YNDSSLIFNNSTSNYAYGNDVEALLGLRFQEICVNICLENKHTTKVIKD 138
           D+R    T   + D+S+  N+ T    +       +    Q IC+N+C ENKHTTKVIKD
Sbjct: 806 DRRGARRTREGHMDASVATNSVTKQIDWAELTYGDISATIQAICINLCTENKHTTKVIKD 865

Query: 139 PDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSKSKDPEFPRRKRKYYNRSKG- 198
            DYRKELGTFCKQY L  GPK+E+KK+KKSS+KRLFS+SK+KDPEFPRRKRKYYN+ K  
Sbjct: 866 FDYRKELGTFCKQYSLSQGPKEEKKKKKKSSSKRLFSRSKAKDPEFPRRKRKYYNKGKRH 925

Query: 199 -PSGNSKVLSKALR 208
            PS  + V  K  R
Sbjct: 926 YPSKTNNVCFKCNR 939

[Close]

BLAST of Moc11g28210 vs. ExPASy TrEMBL
Match: A0A5A7T4I9 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001400 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-24
Identity = 58/78 (74.36%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 116 QEICVNICLENKHTTKVIKDPDYRKELGTFCKQYDLDYGPKDERKKRKKSSNKRLFSKSK 175
           Q IC+N+  ENKHTTKVIKD DYRKELGTFCKQYDLD GPK+E+KK+++ S+KRLFS+SK
Sbjct: 438 QAICINLYTENKHTTKVIKDFDYRKELGTFCKQYDLDKGPKEEKKKKRQFSSKRLFSRSK 497

Query: 176 SKDPEFPRRKRKYYNRSK 194
           +KDPEF +RKRKYYN++K
Sbjct: 498 AKDPEFSQRKRKYYNKNK 515

The following BLAST results are available for this feature:

BLAST of Moc11g28210 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066178.1	2.4e-28	83.33	hypothetical protein E6C27_scaffold21G001880 [Cucumis melo var. makuwa] >TYK1521...	[more]
XP_022151716.1	5.4e-28	62.73	uncharacterized protein LOC111019629 [Momordica charantia]	[more]
TYK01213.1	1.2e-27	55.22	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0066201.1	1.2e-27	55.22	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0038280.1	8.1e-24	74.36	polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Moc11g28210 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g28210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEN9	1.2e-28	83.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DFI7	2.6e-28	62.73	uncharacterized protein LOC111019629 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5A7VKK8	5.8e-28	55.22	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5D3BN76	5.8e-28	55.22	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75...	[more]
A0A5A7T4I9	3.9e-24	74.36	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001400 P...	[more]

BLAST of Moc11g28210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g28210.1	Moc11g28210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding