Moc11g28170 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g28170
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	glycine-rich RNA-binding protein 3, mitochondrial-like
Location	chr11: 20564739 .. 20567380 (-)
RNA-Seq Expression	Moc11g28170
Synteny	Moc11g28170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGTTTGAAATTTTTTCTTGAAGGCCTCTCATATGGTACTAATGACCAGAGTATGAGGGAAGAGTTTAATGGCAAAGGTTTTGGGTTTGTTACTTTCTATGCCAATGAAGAAGTGTTCAGTGCTATCCAAGCGTTTACAAAGGTCTTGTTGTTGCTTTGGAGTAGAGAGTGGTGGGTACGGGGTGGAGGTTATGGTGGTGGTGGCAATGTTAGCTATGAGGGTGGAGGTTATGGTCTCTACAATGCACCTAGAGAGGTGGTGATGATAACTATTTTTCTGGCAATTTTGGTTCGGGTTACACCGAGAATGATCAATCTAATAGCTTTATTGGAAATAGAGATGGAAGAGGAAAATATAGAGACGAGGATGGATTATGCTAAAAGGGCTTGAGAGAACTGCTTGCTTTTGTGTGAAAATGAGTTCTTTTAGTATAATGTCATATACCTCCTACCTCCGAACCACATGTCTTGCATTGATTTTTTATCTTGTTATAGATATGTGATTTGTCAATTATGAAGTCCTAAATGAGAAAATTCGTTCAGAGAATCGTCTTTCGAATAAAAAATAGTATTTTTGTTGATATTGTAATAATATTTTCGTTGATACTCTCTGTTTTTTTTTATGCAATAGTATACCATTACTATTTATTCATATATTGATATTGATTAGTTACTATTAGTAATATCAAGTATTGATATACTCATTATGAAGTACATTAGTGATATATATTACACTGATATACTTCATATTAGGTATATTTGTAACTGATATACTAAACATTAGAAAGAAATCACTTATAGTATTTACACATTCAATTGTTTTTAAAAGAAAATAAATAAATAAATAAACCTTGGGATGACAGATTTGGCGTTATGTTATTGATGTCTTAACCATTTAATAATGCTTAAATTTGTATTCATTAATATACATACTTGGTTAAAATATTATTTTGGCATTTATACTTTCAAGTTCGGGAAATTGCAACGGTTGTATAAATTCATTTTCATATTTAAACAATATCAAAACACATTTTAGAAGTAATATACTTCAAATCATTGGTATATTAGTGCTAAATCAATGGTACATCAGAGGTATATCAGTGGTAAATTATAAGCATATCAAGTATATATCACACATATATCAATGTTATATCAGTGGTAAATCAATGGTAAATCGTATAATCGTATTAGAACTTTTATAAGTAGAAATAATAGATATACTAGTGATGAATCAATGGTAACTCATATAATCATATTAGAAATTATACACGAGATAATCAAAGTTATATCAAAAGTAAATCAATAGTATATCAGTATTATATTAATAGTATATCAGAGGTATATCAAGTATATATCACATATATATTAGTGGTTAATCAATAAATGGTAAATCATATAATCATATAAGAAGTTATATCAGTAGGTATCATAATTATATTATATCAAATCAGTGGTAAATCAAAGGCATTCAAGTATATATGTAACGCCCCGAGTCCCTCAGGTTAGTTAGTCTCGAATCGGGAGATTTTTTTTTTGTTTTTTTTTTTGTTTTTCGTTTAAATTTCAAAGTGGATGTTAATTGAATTTATCTATTTTTATCGGGCCCTAAAAAAATCCAATTAAATTATTATTTACCGAACTTGGTATGTTGGGTCTTGTTTTGAGGGAATGGACTCATTCTTCATTGGGCTTGGATGATTGGGCTTTCATTGAGGGAAAATTGTTTTAAAACAAAACAAAAGGAAACCCTAACATTTTCTCCTTCCTCTTTTCTCCCTTTTCTTCTTCCCCATTCCTAGCCTAGCCGACAGCCCCCCCCCCCCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGCATCCCAGACGGCGGCCCTTCTTCTCCGGCGAAGCGGCACAGCAGCAGCGGCATCTCCACGCCGGCGTCTTCCTGCAGCAGCTCGCGGTGGCGCACAACGCACGGGCCCGACGATCTGTTGCTACTCATCCTTCGGCGACGTGCGCAACCCCCGGCGGGCCTTCTCCACGGCGGCGACGCGTTCCGAGCATAACCGGACAGCAGCGGCAACAGCCCAGGTCTGACGTCATTCCTCCGGTGACCCCGCGCCCAGATCTGTGACGCCCAGAAAGTTTCTTGACGTTTTCCTTCCTCAGTTTGGTGTTACCCAACCCCTCCGGCAACGTTAGACAATTACCCACACATAACCGAAGCTTGATTCTTGATACCCACTCCTTACGACATTGGGTCGGCATTGAACCACCTTCAATCGGAACCAAATCTATGTTACCCATCAGTTTTTGACATCAGTTCAGCAAGCCTAAGGCCATTCGAAGTCGGATTTTGGAGTCGGAACATCCTCTGCGTCGACCCACTTCTAACCCAAGAGGTTTTGGTGTGAGTTAGTAGGTAACAACTCACCTAAATTTGGGTTCAATATTATTTAAATGTTTCCAATTGGCTACTAACCTCGAATCGTACTTTTTCCTTGTAGGAAGTGTTTGACAAGCTTAGGAGCTTTAGGACATTTGGTTGTAAGTAGCACGGGGGCGGGTGCGTGCGTTGATGTTGGTTATTTGGTTGCCGATGTACTGTTTATGATGCTTAATATTGGTTCTGATACGTGGTTGTGCAGTGTAA

mRNA sequence

ATGTCGAGTTTGAAATTTTTTCTTGAAGGCCTCTCATATGGTACTAATGACCAGAGTATGAGGGAAGAGTTTAATGGCAAAGGTTTTGGGTTTGTTACTTTCTATGCCAATGAAGAAGTGTTCAGTGCTATCCAAGCGTTTACAAAGGTCTTGTTGTTGCTTTGGAGTAGAGAGTGGTGGGTACGGGGTGGAGGTTATGGTGGTGGTGGCAATGTTAGCTATGAGGGTGGAGGTTATGGTCTCTACAATGCACCTAGAGAGACGGCGGCCCTTCTTCTCCGGCGAAGCGGCACAGCAGCAGCGGCATCTCCACGCCGGCGTCTTCCTGCAGCAGCTCGCGGTGGCGCACAACGCACGGGCCCGACGATCTGTTGCTACTCATCCTTCGGCGACGTGCGCAACCCCCGGCGGGCCTTCTCCACGGCGGCGACGCGTTCCGAGCATAACCGGACAGCAGCGGCAACAGCCCAGTTCAGCAAGCCTAAGGCCATTCGAAGTCGGATTTTGGAGTCGGAACATCCTCTGCGTCGACCCACTTCTAACCCAAGAGGTTTTGGTGAAGTGTTTGACAAGCTTAGGAGCTTTAGGACATTTGGTTTGTAA

Coding sequence (CDS)

ATGTCGAGTTTGAAATTTTTTCTTGAAGGCCTCTCATATGGTACTAATGACCAGAGTATGAGGGAAGAGTTTAATGGCAAAGGTTTTGGGTTTGTTACTTTCTATGCCAATGAAGAAGTGTTCAGTGCTATCCAAGCGTTTACAAAGGTCTTGTTGTTGCTTTGGAGTAGAGAGTGGTGGGTACGGGGTGGAGGTTATGGTGGTGGTGGCAATGTTAGCTATGAGGGTGGAGGTTATGGTCTCTACAATGCACCTAGAGAGACGGCGGCCCTTCTTCTCCGGCGAAGCGGCACAGCAGCAGCGGCATCTCCACGCCGGCGTCTTCCTGCAGCAGCTCGCGGTGGCGCACAACGCACGGGCCCGACGATCTGTTGCTACTCATCCTTCGGCGACGTGCGCAACCCCCGGCGGGCCTTCTCCACGGCGGCGACGCGTTCCGAGCATAACCGGACAGCAGCGGCAACAGCCCAGTTCAGCAAGCCTAAGGCCATTCGAAGTCGGATTTTGGAGTCGGAACATCCTCTGCGTCGACCCACTTCTAACCCAAGAGGTTTTGGTGAAGTGTTTGACAAGCTTAGGAGCTTTAGGACATTTGGTTTGTAA

Protein sequence

MSSLKFFLEGLSYGTNDQSMREEFNGKGFGFVTFYANEEVFSAIQAFTKVLLLLWSREWWVRGGGYGGGGNVSYEGGGYGLYNAPRETAALLLRRSGTAAAASPRRRLPAAARGGAQRTGPTICCYSSFGDVRNPRRAFSTAATRSEHNRTAAATAQFSKPKAIRSRILESEHPLRRPTSNPRGFGEVFDKLRSFRTFGL

Homology

[Close]

BLAST of Moc11g28170 vs. NCBI nr
Match: XP_022137596.1 (glycine-rich RNA-binding protein 4, mitochondrial-like [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-06
Identity = 49/115 (42.61%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSYGT+DQS+RE F                    +GFGFVTF ANEE  S
Sbjct: 33  MSSSKVFVGGLSYGTDDQSLREAFTKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASS 92

Query: 61  AIQAFT------KVLLLLWSRE----------WWVRGGGYGGGGNVSY-EGGGYG 81
           AIQA        + + + ++ E              GGGYGGGGN  Y  GGGYG
Sbjct: 93  AIQALDGQDLDGRRIRVNFATERSRGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 147

[Close]

BLAST of Moc11g28170 vs. NCBI nr
Match: XP_022994220.1 (glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-06
Identity = 49/119 (41.18%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSYGT+D S+RE F                    +GFGFVTF  NEE  S
Sbjct: 37  MSSSKVFVGGLSYGTDDHSLREAFTKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASS 96

Query: 61  AIQAFTKVLL----------LLWSREWWVRGGGYGGGGNVSYE-GGGYGLYNAPRETAA 91
           AIQA     L             SR  +V GGGY  GG   Y  GGGYG  +  R +A+
Sbjct: 97  AIQALDGQDLHGRRIRVNFATERSRGSFVGGGGYNSGGGGGYSGGGGYGSVDYNRSSAS 155

[Close]

BLAST of Moc11g28170 vs. NCBI nr
Match: XP_008785986.1 (glycine-rich RNA-binding protein 10-like [Phoenix dactylifera])

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-06
Identity = 42/109 (38.53%), Postives = 54/109 (49.54%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSY T+DQS+RE F                    +GFGF+TF ++EE  +
Sbjct: 28  MSSSKLFVGGLSYSTDDQSLREAFTSYGEVIEARIIMDRETGRSRGFGFITFTSSEEASA 87

Query: 61  AIQA---------FTKVLLLLWSREWWVRGGGYGGGGNVSYEGGGYGLY 83
           AI +           +V      R  +  GGGYG GG  +Y GGGYG Y
Sbjct: 88  AISSMDGKDLHGRIVRVNYANERRSAYGSGGGYGAGGYGAYGGGGYGAY 136

[Close]

BLAST of Moc11g28170 vs. NCBI nr
Match: XP_042418756.1 (glycine-rich RNA-binding protein 2, mitochondrial-like [Zingiber officinale])

HSP 1 Score: 62.0 bits (149), Expect = 6.7e-06
Identity = 44/104 (42.31%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSYGT+DQS+RE F                    +GFGFVTF +NEE  S
Sbjct: 28  MSSSKVFVGGLSYGTDDQSLREAFTSYGEVVEARVIMDRETGRSRGFGFVTFTSNEEASS 87

Query: 61  AIQAFT------KVLLLLWSREWWVRGGGYGGGGNVSYEGGGYG 81
           AI          +++ + ++ +    GGGYGGGG+  Y GGGYG
Sbjct: 88  AIGGMDGKDLHGRMVRVNYATD-RTGGGGYGGGGS-GYGGGGYG 129

[Close]

BLAST of Moc11g28170 vs. NCBI nr
Match: XP_013706334.1 (glycine-rich RNA-binding protein 3, mitochondrial-like [Brassica napus] >XP_022562217.1 glycine-rich RNA-binding protein 3, mitochondrial-like [Brassica napus])

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-06
Identity = 40/104 (38.46%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEFN------------------GKGFGFVTFYANEEVFS 60
           MSS K F+ G+ YG N+ S+RE F+                   +GFGFVTF + E   S
Sbjct: 33  MSSSKLFIGGMEYGMNEDSLREAFSKYGEVVETRVILDRETGRSRGFGFVTFTSTEAASS 92

Query: 61  AIQAFT------KVLLLLWSREWWVRGGGYGGGGNVSYEGGGYG 81
           AIQA        +++ + ++ +    GGGYGGGG   Y GGGYG
Sbjct: 93  AIQALDGQDLHGRIVKVNYAHD-RTSGGGYGGGGGGGYGGGGYG 135

[Close]

BLAST of Moc11g28170 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.7e-05
Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ G++Y  ++ S+RE F                    +GFGFVTF ++E   S
Sbjct: 37  MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 96

Query: 61  AIQAFT------KVLLLLWSREWWVRGGGYGGGGNVSYEGGGYG 81
           AIQA        +V+ + ++ +    GGG+GGGG     GGGYG
Sbjct: 97  AIQALDGRDLHGRVVKVNYAND-RTSGGGFGGGG-YGGGGGGYG 138

[Close]

BLAST of Moc11g28170 vs. ExPASy TrEMBL
Match: A0A6J1C734 (glycine-rich RNA-binding protein 4, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111009002 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.0e-07
Identity = 49/115 (42.61%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSYGT+DQS+RE F                    +GFGFVTF ANEE  S
Sbjct: 33  MSSSKVFVGGLSYGTDDQSLREAFTKYGDVVEARVILDRDTGRSRGFGFVTFNANEEASS 92

Query: 61  AIQAFT------KVLLLLWSRE----------WWVRGGGYGGGGNVSY-EGGGYG 81
           AIQA        + + + ++ E              GGGYGGGGN  Y  GGGYG
Sbjct: 93  AIQALDGQDLDGRRIRVNFATERSRGGFGGGGGGYGGGGYGGGGNAGYGGGGGYG 147

[Close]

BLAST of Moc11g28170 vs. ExPASy TrEMBL
Match: A0A6J1K0M4 (glycine-rich RNA-binding protein 4, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111490023 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-06
Identity = 49/119 (41.18%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSYGT+D S+RE F                    +GFGFVTF  NEE  S
Sbjct: 37  MSSSKVFVGGLSYGTDDHSLREAFTKYGEVVEARVILDRDTGRSRGFGFVTFVGNEEASS 96

Query: 61  AIQAFTKVLL----------LLWSREWWVRGGGYGGGGNVSYE-GGGYGLYNAPRETAA 91
           AIQA     L             SR  +V GGGY  GG   Y  GGGYG  +  R +A+
Sbjct: 97  AIQALDGQDLHGRRIRVNFATERSRGSFVGGGGYNSGGGGGYSGGGGYGSVDYNRSSAS 155

[Close]

BLAST of Moc11g28170 vs. ExPASy TrEMBL
Match: A0A1U7ZUI6 (glycine-rich RNA-binding protein 3, mitochondrial-like OS=Nelumbo nucifera OX=4432 GN=LOC104597946 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-06
Identity = 48/108 (44.44%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLSYGT+DQS+RE F                    +GFGFVT+ + EE  S
Sbjct: 37  MSSSKIFIGGLSYGTDDQSLREAFTAYGEVIEARVIMDRETGRSRGFGFVTYTSGEEASS 96

Query: 61  AIQAFTKVLL--------LLWSREWWVR--GGGYGGGGNVSYEGGGYG 81
           AIQA     L            R    R  GGGYGGGG  SY GGGYG
Sbjct: 97  AIQALDGQELHGRRVRVNYAADRAGGFRSGGGGYGGGG--SYGGGGYG 142

[Close]

BLAST of Moc11g28170 vs. ExPASy TrEMBL
Match: A0A3P6ETB1 (RRM domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC7T45001H PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-06
Identity = 40/104 (38.46%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEFN------------------GKGFGFVTFYANEEVFS 60
           MSS K F+ G+ YG N+ S+RE F+                   +GFGFVTF + E   S
Sbjct: 32  MSSSKLFIGGMEYGMNEDSLREAFSKYGEVVETRVILDRETGRSRGFGFVTFTSTEAASS 91

Query: 61  AIQAFT------KVLLLLWSREWWVRGGGYGGGGNVSYEGGGYG 81
           AIQA        +++ + ++ +    GGGYGGGG   Y GGGYG
Sbjct: 92  AIQALDGQDLHGRIVKVNYAHD-RTSGGGYGGGGGGGYGGGGYG 134

[Close]

BLAST of Moc11g28170 vs. ExPASy TrEMBL
Match: A0A1D1Z073 (Glycine-rich RNA-binding protein 2, mitochondrial (Fragment) OS=Anthurium amnicola OX=1678845 GN=GRP2_19 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-06
Identity = 42/104 (40.38%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ GLS+GT+DQS+RE F                    +GFGF+TF +NEE  S
Sbjct: 38  MSSSKLFVGGLSFGTDDQSLREAFAQFGDVVEARVILDRETGRSRGFGFITFTSNEEASS 97

Query: 61  AIQAFT------KVLLLLWSREWWVRGGGYGGGGNVSYEGGGYG 81
           AI          +++ + ++ +    GGGYGGGG   Y GGGYG
Sbjct: 98  AITGMDGKDLHGRMVRVNYATDRARGGGGYGGGG---YGGGGYG 138

[Close]

BLAST of Moc11g28170 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 48.9 bits (115), Expect = 5.5e-06
Identity = 37/104 (35.58%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 1   MSSLKFFLEGLSYGTNDQSMREEF------------------NGKGFGFVTFYANEEVFS 60
           MSS K F+ G++Y  ++ S+RE F                    +GFGFVTF ++E   S
Sbjct: 37  MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 96

Query: 61  AIQAFT------KVLLLLWSREWWVRGGGYGGGGNVSYEGGGYG 81
           AIQA        +V+ + ++ +    GGG+GGGG     GGGYG
Sbjct: 97  AIQALDGRDLHGRVVKVNYAND-RTSGGGFGGGG-YGGGGGGYG 138

The following BLAST results are available for this feature:

BLAST of Moc11g28170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137596.1	1.0e-06	42.61	glycine-rich RNA-binding protein 4, mitochondrial-like [Momordica charantia]	[more]
XP_022994220.1	3.9e-06	41.18	glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita maxima]	[more]
XP_008785986.1	3.9e-06	38.53	glycine-rich RNA-binding protein 10-like [Phoenix dactylifera]	[more]
XP_042418756.1	6.7e-06	42.31	glycine-rich RNA-binding protein 2, mitochondrial-like [Zingiber officinale]	[more]
XP_013706334.1	8.8e-06	38.46	glycine-rich RNA-binding protein 3, mitochondrial-like [Brassica napus] >XP_0225...	[more]

BLAST of Moc11g28170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNR1	7.7e-05	35.58	Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Moc11g28170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C734	5.0e-07	42.61	glycine-rich RNA-binding protein 4, mitochondrial-like OS=Momordica charantia OX...	[more]
A0A6J1K0M4	1.9e-06	41.18	glycine-rich RNA-binding protein 4, mitochondrial-like OS=Cucurbita maxima OX=36...	[more]
A0A1U7ZUI6	4.3e-06	44.44	glycine-rich RNA-binding protein 3, mitochondrial-like OS=Nelumbo nucifera OX=44...	[more]
A0A3P6ETB1	4.3e-06	38.46	RRM domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC7T45001H PE=4 ...	[more]
A0A1D1Z073	4.3e-06	40.38	Glycine-rich RNA-binding protein 2, mitochondrial (Fragment) OS=Anthurium amnico...	[more]

BLAST of Moc11g28170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61030.1	5.5e-06	35.58	glycine-rich RNA-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g28170.1	Moc11g28170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding