Moc11g28000 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g28000
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	TMV resistance protein N-like
Location	chr11: 20456222 .. 20456539 (+)
RNA-Seq Expression	Moc11g28000
Synteny	Moc11g28000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATAAGAAGCTCTTAATCGGGGACGATCTTAGTGAAAAGCTTGTGAAAGCAATCGAAGAATCGAGATCTTCCATCGTGGTTCTATCGAAAGACTATGCTTCTTCCAAGTGGTGCTTGAAAGAGTTATCCGAGATAATGGATTGTATGGCTGAGACGACACATCGAGTCCTTCCTGTGTTTTACCATGTGGATCCTTCCCATGTTCGACATCAGTCTGGAAATTTCAAGAAAAGCTTCGATGAACACACAGAAAAGGCTCAAAAGTTGTTAGGGGAGCAAAAAGAAGAATACTTGGAGGAGGTCCAAAATTGA

mRNA sequence

ATGGATGATAAGAAGCTCTTAATCGGGGACGATCTTAGTGAAAAGCTTGTGAAAGCAATCGAAGAATCGAGATCTTCCATCGTGGTTCTATCGAAAGACTATGCTTCTTCCAAGTGGTGCTTGAAAGAGTTATCCGAGATAATGGATTGTATGGCTGAGACGACACATCGAGTCCTTCCTGTGTTTTACCATGTGGATCCTTCCCATGTTCGACATCAGTCTGGAAATTTCAAGAAAAGCTTCGATGAACACACAGAAAAGGCTCAAAAGTTGTTAGGGGAGCAAAAAGAAGAATACTTGGAGGAGGTCCAAAATTGA

Coding sequence (CDS)

ATGGATGATAAGAAGCTCTTAATCGGGGACGATCTTAGTGAAAAGCTTGTGAAAGCAATCGAAGAATCGAGATCTTCCATCGTGGTTCTATCGAAAGACTATGCTTCTTCCAAGTGGTGCTTGAAAGAGTTATCCGAGATAATGGATTGTATGGCTGAGACGACACATCGAGTCCTTCCTGTGTTTTACCATGTGGATCCTTCCCATGTTCGACATCAGTCTGGAAATTTCAAGAAAAGCTTCGATGAACACACAGAAAAGGCTCAAAAGTTGTTAGGGGAGCAAAAAGAAGAATACTTGGAGGAGGTCCAAAATTGA

Protein sequence

MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPVFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN

Homology

[Close]

BLAST of Moc11g28000 vs. NCBI nr
Match: XP_022141856.1 (toll/interleukin-1 receptor-like protein isoform X1 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 2.5e-44
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM+ETTHRVLP
Sbjct: 93  MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSETTHRVLP 152

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNF+KSFDEH EKAQK  G+QKEEY +EV+N
Sbjct: 153 VFYHVDPSHVRHQSGNFRKSFDEHEEKAQKFTGQQKEEYWKEVRN 197

[Close]

BLAST of Moc11g28000 vs. NCBI nr
Match: XP_022141857.1 (toll/interleukin-1 receptor-like protein isoform X2 [Momordica charantia] >XP_022141858.1 toll/interleukin-1 receptor-like protein isoform X2 [Momordica charantia] >XP_022141859.1 toll/interleukin-1 receptor-like protein isoform X2 [Momordica charantia] >XP_022141860.1 toll/interleukin-1 receptor-like protein isoform X2 [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 2.5e-44
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM+ETTHRVLP
Sbjct: 48  MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSETTHRVLP 107

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNF+KSFDEH EKAQK  G+QKEEY +EV+N
Sbjct: 108 VFYHVDPSHVRHQSGNFRKSFDEHEEKAQKFTGQQKEEYWKEVRN 152

[Close]

BLAST of Moc11g28000 vs. NCBI nr
Match: XP_022141776.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia])

HSP 1 Score: 187.6 bits (475), Expect = 5.6e-44
Identity = 93/105 (88.57%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM++TTHRVLP
Sbjct: 48  MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSDTTHRVLP 107

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNF+KSFDEH EKAQK  G+QKEEY +EV+N
Sbjct: 108 VFYHVDPSHVRHQSGNFRKSFDEHEEKAQKFTGQQKEEYWKEVRN 152

[Close]

BLAST of Moc11g28000 vs. NCBI nr
Match: XP_022141775.1 (TMV resistance protein N-like [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 7.3e-44
Identity = 94/105 (89.52%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEK VKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM+ETTHRVLP
Sbjct: 76  MDDKKLLIGDDLSEKFVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSETTHRVLP 135

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNFKKSFD H EKA KL+G Q+EEYL+EVQN
Sbjct: 136 VFYHVDPSHVRHQSGNFKKSFDGHEEKAPKLIGVQREEYLKEVQN 180

[Close]

BLAST of Moc11g28000 vs. NCBI nr
Match: XP_022141862.1 (TMV resistance protein N-like [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-41
Identity = 89/105 (84.76%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDD+KLLIGDDLSE L+KAIEESRSSIVVLSKDYASSKWCLKEL +IMDCM+ETTH+VLP
Sbjct: 91  MDDRKLLIGDDLSENLMKAIEESRSSIVVLSKDYASSKWCLKELVKIMDCMSETTHQVLP 150

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNFKKSFDEH E A+K+ G+QKE+YL EV+N
Sbjct: 151 VFYHVDPSHVRHQSGNFKKSFDEHEEDAKKITGQQKEKYLVEVKN 195

[Close]

BLAST of Moc11g28000 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-19
Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 3   DKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPVF 62
           D +L  G+ ++ +L+KAIEESRSS++V S++YA S+WCL EL +IM+C  +  H V P+F
Sbjct: 57  DDRLRRGEAIAPELLKAIEESRSSVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIF 116

Query: 63  YHVDPSHVRHQSGNFKKSFDEHTE 87
           YHVDPSHVR Q G+F ++F  + E
Sbjct: 117 YHVDPSHVRKQEGSFGEAFAGYEE 140

[Close]

BLAST of Moc11g28000 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-18
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           DDK+L  G  +  +L KAIEES+ +IVV S++YA+S+WCL EL +IM+C       V+P+
Sbjct: 45  DDKRLEYGATIPGELCKAIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPI 104

Query: 62  FYHVDPSHVRHQSGNFKKSFDEHTEK 88
           FY VDPSHVR+Q  +F K+F+EH  K
Sbjct: 105 FYDVDPSHVRNQKESFAKAFEEHETK 130

[Close]

BLAST of Moc11g28000 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 3   DKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDC---MAETTHRVL 62
           D KL  G+ ++ +L+KAIEESRSS++V S++YA S+WCL EL +IM+C     +  H V 
Sbjct: 60  DDKLRRGEAIAPELLKAIEESRSSVIVFSENYARSRWCLDELVKIMECHKDKKDPGHAVF 119

Query: 63  PVFYHVDPSHVRHQSGNFKKSFDEHTE 87
           P+FYHVDPSHVR Q G+F ++F  + E
Sbjct: 120 PIFYHVDPSHVRKQEGSFGEAFAGYGE 146

[Close]

BLAST of Moc11g28000 vs. ExPASy Swiss-Prot
Match: F4I594 (Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           DD+++L G+ +S  L +AI ESR SIV+LSK+YASS WCL EL EI+ C  +    V+ V
Sbjct: 46  DDQRILRGETISPALTQAIRESRISIVLLSKNYASSGWCLDELLEILKCKDDMGQIVMTV 105

Query: 62  FYHVDPSHVRHQSGNFKKSFDE 84
           FY VDPS VR Q+G F  +F+E
Sbjct: 106 FYGVDPSDVRKQTGEFGIAFNE 127

[Close]

BLAST of Moc11g28000 vs. ExPASy Swiss-Prot
Match: Q40253 (Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-15
Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHR-VLP 61
           DD +LL G ++   L++AI++S+  + ++S  YA SKWCL EL+EI+    E   R +LP
Sbjct: 94  DDDELLKGKEIGPNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILP 153

Query: 62  VFYHVDPSHVRHQSGNFKKSFDEHTEK 88
           +FY VDPS VRHQ+G +KK+F +H  K
Sbjct: 154 IFYMVDPSDVRHQTGCYKKAFRKHANK 180

[Close]

BLAST of Moc11g28000 vs. ExPASy TrEMBL
Match: A0A6J1CJZ3 (toll/interleukin-1 receptor-like protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012121 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM+ETTHRVLP
Sbjct: 48  MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSETTHRVLP 107

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNF+KSFDEH EKAQK  G+QKEEY +EV+N
Sbjct: 108 VFYHVDPSHVRHQSGNFRKSFDEHEEKAQKFTGQQKEEYWKEVRN 152

[Close]

BLAST of Moc11g28000 vs. ExPASy TrEMBL
Match: A0A6J1CKG9 (toll/interleukin-1 receptor-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012121 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 94/105 (89.52%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM+ETTHRVLP
Sbjct: 93  MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSETTHRVLP 152

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNF+KSFDEH EKAQK  G+QKEEY +EV+N
Sbjct: 153 VFYHVDPSHVRHQSGNFRKSFDEHEEKAQKFTGQQKEEYWKEVRN 197

[Close]

BLAST of Moc11g28000 vs. ExPASy TrEMBL
Match: A0A6J1CK95 (LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012057 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.7e-44
Identity = 93/105 (88.57%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM++TTHRVLP
Sbjct: 48  MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSDTTHRVLP 107

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNF+KSFDEH EKAQK  G+QKEEY +EV+N
Sbjct: 108 VFYHVDPSHVRHQSGNFRKSFDEHEEKAQKFTGQQKEEYWKEVRN 152

[Close]

BLAST of Moc11g28000 vs. ExPASy TrEMBL
Match: A0A6J1CJ31 (TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012055 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.5e-44
Identity = 94/105 (89.52%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDDKKLLIGDDLSEK VKAIEESRSSIVVLSKDYASSKWCLKEL++IMDCM+ETTHRVLP
Sbjct: 76  MDDKKLLIGDDLSEKFVKAIEESRSSIVVLSKDYASSKWCLKELAKIMDCMSETTHRVLP 135

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNFKKSFD H EKA KL+G Q+EEYL+EVQN
Sbjct: 136 VFYHVDPSHVRHQSGNFKKSFDGHEEKAPKLIGVQREEYLKEVQN 180

[Close]

BLAST of Moc11g28000 vs. ExPASy TrEMBL
Match: A0A6J1CL15 (TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012122 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42
Identity = 89/105 (84.76%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MDDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLP 60
           MDD+KLLIGDDLSE L+KAIEESRSSIVVLSKDYASSKWCLKEL +IMDCM+ETTH+VLP
Sbjct: 91  MDDRKLLIGDDLSENLMKAIEESRSSIVVLSKDYASSKWCLKELVKIMDCMSETTHQVLP 150

Query: 61  VFYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLEEVQN 106
           VFYHVDPSHVRHQSGNFKKSFDEH E A+K+ G+QKE+YL EV+N
Sbjct: 151 VFYHVDPSHVRHQSGNFKKSFDEHEEDAKKITGQQKEKYLVEVKN 195

[Close]

BLAST of Moc11g28000 vs. TAIR 10
Match: AT1G72860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 91.3 bits (225), Expect = 5.1e-19
Identity = 43/85 (50.59%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           DDKKL +GD +SE++ +AI+ S  ++V+LS++YASS WCL EL  +MD   +   +V+P+
Sbjct: 45  DDKKLELGDSISEEISRAIQNSTYALVILSENYASSSWCLDELRMVMDLHLKNKIKVVPI 104

Query: 62  FYHVDPSHVRHQSGNFKKSFDEHTE 87
           FY VDPSHVRHQ+G+F  +FD++ +
Sbjct: 105 FYGVDPSHVRHQTGSF--TFDKYQD 127

[Close]

BLAST of Moc11g28000 vs. TAIR 10
Match: AT1G27170.1 (transmembrane receptors;ATP binding )

HSP 1 Score: 85.5 bits (210), Expect = 2.8e-17
Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           D++ +  GD++S  L   +E+S +S++V+S++Y+ S+WCL EL+ +    +    R+LP+
Sbjct: 46  DNEGMERGDEISSSLKAGMEDSAASVIVISRNYSGSRWCLDELAMLCKMKSSLDRRILPI 105

Query: 62  FYHVDPSHVRHQSGNFKKSFDEHTEKAQKLLGEQKEEYLE 102
           FYHVDPSHVR QS + KK F+EH    Q    E+KE+  E
Sbjct: 106 FYHVDPSHVRKQSDHIKKDFEEH----QVRFSEEKEKVQE 141

[Close]

BLAST of Moc11g28000 vs. TAIR 10
Match: AT1G64070.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           DD+++L G+ +S  L +AI ESR SIV+LSK+YASS WCL EL EI+ C  +    V+ V
Sbjct: 46  DDQRILRGETISPALTQAIRESRISIVLLSKNYASSGWCLDELLEILKCKDDMGQIVMTV 105

Query: 62  FYHVDPSHVRHQSGNFKKSFDE 84
           FY VDPS VR Q+G F  +F+E
Sbjct: 106 FYGVDPSDVRKQTGEFGIAFNE 127

[Close]

BLAST of Moc11g28000 vs. TAIR 10
Match: AT1G72840.1 (Disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-16
Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           DD+KL IGD +++ LVKAI+ S  ++V+LS++YA+S WCL+EL  IM   +E   +VLP+
Sbjct: 48  DDRKLEIGDTIADGLVKAIQTSWFAVVILSENYATSTWCLEELRLIMQLHSEEQIKVLPI 107

Query: 62  FYHVDPSHVRHQSGNFKKSFDEH 85
           FY V PS VR+Q G+F  +F  +
Sbjct: 108 FYGVKPSDVRYQEGSFATAFQRY 130

[Close]

BLAST of Moc11g28000 vs. TAIR 10
Match: AT1G72840.2 (Disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-16
Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 2   DDKKLLIGDDLSEKLVKAIEESRSSIVVLSKDYASSKWCLKELSEIMDCMAETTHRVLPV 61
           DD+KL IGD +++ LVKAI+ S  ++V+LS++YA+S WCL+EL  IM   +E   +VLP+
Sbjct: 48  DDRKLEIGDTIADGLVKAIQTSWFAVVILSENYATSTWCLEELRLIMQLHSEEQIKVLPI 107

Query: 62  FYHVDPSHVRHQSGNFKKSFDEH 85
           FY V PS VR+Q G+F  +F  +
Sbjct: 108 FYGVKPSDVRYQEGSFATAFQRY 130

The following BLAST results are available for this feature:

BLAST of Moc11g28000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141856.1	2.5e-44	89.52	toll/interleukin-1 receptor-like protein isoform X1 [Momordica charantia]	[more]
XP_022141857.1	2.5e-44	89.52	toll/interleukin-1 receptor-like protein isoform X2 [Momordica charantia] >XP_02...	[more]
XP_022141776.1	5.6e-44	88.57	LOW QUALITY PROTEIN: TMV resistance protein N-like [Momordica charantia]	[more]
XP_022141775.1	7.3e-44	89.52	TMV resistance protein N-like [Momordica charantia]	[more]
XP_022141862.1	1.5e-41	84.76	TMV resistance protein N-like [Momordica charantia]	[more]

BLAST of Moc11g28000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	3.8e-19	52.38	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
Q40392	1.9e-18	52.33	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
V9M398	1.2e-17	51.72	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
F4I594	1.5e-15	53.66	Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=3 S...	[more]
Q40253	2.5e-15	47.13	Disease resistance protein L6 OS=Linum usitatissimum OX=4006 GN=L6 PE=1 SV=1	[more]

BLAST of Moc11g28000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJZ3	1.2e-44	89.52	toll/interleukin-1 receptor-like protein isoform X2 OS=Momordica charantia OX=36...	[more]
A0A6J1CKG9	1.2e-44	89.52	toll/interleukin-1 receptor-like protein isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1CK95	2.7e-44	88.57	LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Momordica charantia OX=367...	[more]
A0A6J1CJ31	3.5e-44	89.52	TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012055 PE=...	[more]
A0A6J1CL15	7.4e-42	84.76	TMV resistance protein N-like OS=Momordica charantia OX=3673 GN=LOC111012122 PE=...	[more]

BLAST of Moc11g28000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72860.1	5.1e-19	50.59	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G27170.1	2.8e-17	42.00	transmembrane receptors;ATP binding	[more]
AT1G64070.1	1.1e-16	53.66	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G72840.1	1.8e-16	49.40	Disease resistance protein (TIR-NBS-LRR class)	[more]
AT1G72840.2	1.8e-16	49.40	Disease resistance protein (TIR-NBS-LRR class)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 1..95 e-value: 2.8E-4 score: 26.8
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 2..90 e-value: 4.8E-30 score: 104.6
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 1..105 score: 24.982878
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 1..105 e-value: 6.0E-38 score: 132.1
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 2..85
None	No IPR available	PANTHER	PTHR32009:SF94	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN	coord: 1..103
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g28000.1	Moc11g28000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity