Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAACGAGCCGAGTGCTAGTCCAACCTGGAAATCGGTTTGTGGCCTTGGAAGAGAAGGTCGAGGGTATGTACCAGCACATGACCCAACTGCTTCAGCAGTTAGAGCAGAGAGAGGCAAGCCTACCGCCACTCGTCAGAGACCCCCGAAAGAGAAAGGGTCCGGCCACTGAGAGAAGGAGATGAGTCGACAAATAAAGCGCAGAGCAAATTGAAGCTGGGGGGAAACGACAAGCGGAGAACTCATATTTTCGACTCGTAAGGCCAGTCGAATGCCGACAGAAAGCGACCTAAGTCCCTACCTAATGGGGACAAAGATGAGCATAATGCCCGAGGAGATCTCGGGCCGGTAGACCTCGACAAGGAAAAACCAGGCGAGCGACCTGAATTATCCGAAAAGCAACTAAGCTTCAAAGAAAAGGGCTTCGACCTTGAAGAACTAATAGACCAAGTAGATTCCTCGTTCATAAAGGAGATAATGGGGGAGAAGGTGCCTCCAAAATTCAAGCTACCAGCCATAAAACAGTTTGATGGGACGACAGACCCGGTAGATCACCTCGACGCCTACCGGAAATGGATGGACATCTACGGGGTCTTAGAGGCAATCTGATGCCGAGTCTTCTCATTCACCCTGGGCAGGTCGGCTAGGGTTTGGTTTTGACAATTAAAGCGGGGATCAATTTCAAGCTTCAAGAGCCTGGCTAGGGCATTTATGACCCAATTCGTAGGAGGTCGGAATTGGAGTCGACCAGTGGCCTACCTCCTGACCGTAAAGCAGAGAGCCTTCACGACTATGTGGCTCGATTCAATGAGGAGAAGCTACAAGTGGGAGGTCTTACTGATGCAGTGTCAATTCTGGCGTTCATGTCTGGCATCAGGGATGAGCACCTATCGTTTTTATTTGGAAAGAAAACTCCAAGCACCTTTGCAGAAGCACTGAGCCGAACCTAA
mRNA sequence
ATGACCAACGAGCCGAGTGCTAGTCCAACCTGGAAATCGGTTTGTGGCCTTGGAAGAGAAGGTCGAGGGTATGTACCAGCACATGACCCAACTGCTTCAGCAGTTAGAGCAGAGAGAGGCAAGCCTACCGCCACTCGTCAGAGACCCCCGAAAGAGAAAGGAAAGCGACCTAAGTCCCTACCTAATGGGGACAAAGATGAGCATAATGCCCGAGGAGATCTCGGGCCGGTAGACCTCGACAAGGAAAAACCAGGCGAGCGACCTGAATTATCCGAAAAGCAACTAAGCTTCAAAGAAAAGGGCTTCGACCTTGAAGAACTAATAGACCAAGTAGATTCCTCGTTCATAAAGGAGATAATGGGGGAGAAGGTGCCTCCAAAATTCAAGCTACCAGCCATAAAACAGTTTGATGGGACGACAGACCCGGTAGATCACCTCGACGCCTACCGGAAATGGATGGACATCTACGGGGGCATTTATGACCCAATTCGTAGGAGGTCGGAATTGGAGTCGACCAGTGGCCTACCTCCTGACCGTAAAGCAGAGAGCCTTCACGACTATGTGGCTCGATTCAATGAGGAGAAGCTACAAGTGGGAGGTCTTACTGATGCAGTGTCAATTCTGGCGTTCATGTCTGGCATCAGGGATGAGCACCTATCGTTTTTATTTGGAAAGAAAACTCCAAGCACCTTTGCAGAAGCACTGAGCCGAACCTAA
Coding sequence (CDS)
ATGACCAACGAGCCGAGTGCTAGTCCAACCTGGAAATCGGTTTGTGGCCTTGGAAGAGAAGGTCGAGGGTATGTACCAGCACATGACCCAACTGCTTCAGCAGTTAGAGCAGAGAGAGGCAAGCCTACCGCCACTCGTCAGAGACCCCCGAAAGAGAAAGGAAAGCGACCTAAGTCCCTACCTAATGGGGACAAAGATGAGCATAATGCCCGAGGAGATCTCGGGCCGGTAGACCTCGACAAGGAAAAACCAGGCGAGCGACCTGAATTATCCGAAAAGCAACTAAGCTTCAAAGAAAAGGGCTTCGACCTTGAAGAACTAATAGACCAAGTAGATTCCTCGTTCATAAAGGAGATAATGGGGGAGAAGGTGCCTCCAAAATTCAAGCTACCAGCCATAAAACAGTTTGATGGGACGACAGACCCGGTAGATCACCTCGACGCCTACCGGAAATGGATGGACATCTACGGGGGCATTTATGACCCAATTCGTAGGAGGTCGGAATTGGAGTCGACCAGTGGCCTACCTCCTGACCGTAAAGCAGAGAGCCTTCACGACTATGTGGCTCGATTCAATGAGGAGAAGCTACAAGTGGGAGGTCTTACTGATGCAGTGTCAATTCTGGCGTTCATGTCTGGCATCAGGGATGAGCACCTATCGTTTTTATTTGGAAAGAAAACTCCAAGCACCTTTGCAGAAGCACTGAGCCGAACCTAA
Protein sequence
MTNEPSASPTWKSVCGLGREGRGYVPAHDPTASAVRAERGKPTATRQRPPKEKGKRPKSLPNGDKDEHNARGDLGPVDLDKEKPGERPELSEKQLSFKEKGFDLEELIDQVDSSFIKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIRRRSELESTSGLPPDRKAESLHDYVARFNEEKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSRT
Homology
BLAST of Moc11g27970 vs. NCBI nr
Match:
XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])
HSP 1 Score: 221.5 bits (563), Expect = 7.9e-54
Identity = 129/240 (53.75%), Postives = 149/240 (62.08%), Query Frame = 0
Query: 45 TRQR-----PPKEKGKRPKSLPNGDKDEHNARGDLGPVDLDKEKPGERPELSEKQLSFKE 104
TRQR P K K + PNG K +H+ R P+ LDK KP +RPE SEK+ S KE
Sbjct: 106 TRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNS-EPISLDKGKPADRPESSEKRHSHKE 165
Query: 105 KGFDLEELIDQVDSSFIKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGI 164
KGFDLEEL+DQ DS F +EIM EKVPPKFKLP +KQFD TTDPVDHLDAYR+WMDIY G+
Sbjct: 166 KGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIY-GV 225
Query: 165 YDPIR-------------------RRSELESTSGLP-----------------------P 224
+ +R +R + S L
Sbjct: 226 SEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIK 285
Query: 225 DRKAESLHDYVARFNEEKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
R ESL DYVARFNEEKLQV GLTDAVS+LAFMSG+RDEHLSF FGK+TP+TF+EALSR
Sbjct: 286 QRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSR 343
BLAST of Moc11g27970 vs. NCBI nr
Match:
XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])
HSP 1 Score: 213.4 bits (542), Expect = 2.2e-51
Identity = 124/226 (54.87%), Postives = 146/226 (64.60%), Query Frame = 0
Query: 55 KRPKSL-PNGDKDEHNARGDLGPVDLDKEKPGERPELSEKQLSFKEKGFDLEELIDQVDS 114
K+ KSL PNG K++H+ R P+ L+K KP +RPE SEK+ + KEKGFDLEEL+ Q DS
Sbjct: 25 KQHKSLAPNGSKNDHDNRNS-EPISLNKGKPIDRPESSEKRHNQKEKGFDLEELLGQADS 84
Query: 115 SFIKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIR--------- 174
F +EIM EKVPPKFKLP +K FDG T+PVDHLDAYR+WMDIY G+ D IR
Sbjct: 85 PFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIY-GVSDAIRCRVFSTTLN 144
Query: 175 ----------RRSELESTSGLP-----------------------PDRKAESLHDYVARF 234
+R + S L R AESLHDYVARF
Sbjct: 145 GSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARF 204
Query: 235 NEEKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
NEEKLQ+ GLTDAVS+LAFMSG+RDEHLSF F K+TPSTF+EALSR
Sbjct: 205 NEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSR 248
BLAST of Moc11g27970 vs. NCBI nr
Match:
XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])
HSP 1 Score: 154.5 bits (389), Expect = 1.2e-33
Identity = 86/164 (52.44%), Postives = 100/164 (60.98%), Query Frame = 0
Query: 116 IKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIR----------- 175
++EIM KVPPKFKLP +KQFDGT D VDHLDAYR+WMDIY G+ + ++
Sbjct: 1 MEEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIY-GVSEAVKCRVFSTTLSGS 60
Query: 176 --------RRSELESTSGLP-----------------------PDRKAESLHDYVARFNE 235
+R + S L R ESLHDYVARFNE
Sbjct: 61 ARVWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNE 120
Query: 236 EKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
EKLQV GLT+AVS++AFMS IRDEHLSF FGKKTPSTF+EALSR
Sbjct: 121 EKLQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSR 163
BLAST of Moc11g27970 vs. NCBI nr
Match:
XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])
HSP 1 Score: 136.7 bits (343), Expect = 2.6e-28
Identity = 96/223 (43.05%), Postives = 113/223 (50.67%), Query Frame = 0
Query: 17 LGREGRGYVP--AHDPTASAVRAERGKPTATRQRPPKEKGKRPKSLPNGDKDEHNARGDL 76
LGREG G P DP R P++ + K PNG K +H R
Sbjct: 7 LGREGLGPDPMLGLDPVLGP-RPSSDPPSSIHDFAQQHK----SPAPNGGKSDHEDRSS- 66
Query: 77 GPVDLDKEKPGERPELSEKQLSFKEKGFDLEELIDQVDSSFIKEIMGEKVPPKFKLPAIK 136
P+ LDK KP +RPE SEK+ + K+KGFDLEEL+DQ DS F +EIM EK
Sbjct: 67 EPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSPFTEEIMREK----------- 126
Query: 137 QFDGTTDPVDHLDAYRKWMDIYGGIYDPIRRRSELESTSGLPPDRKAESLHDYVARFNEE 196
R ESLHDYV RFN+E
Sbjct: 127 --------------------------------------------RTTESLHDYVTRFNKE 168
Query: 197 KLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
KLQV GLTDAVS+LAF+ G+RDEHLSF FGK+TPSTF+EALSR
Sbjct: 187 KLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSR 168
BLAST of Moc11g27970 vs. NCBI nr
Match:
XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])
HSP 1 Score: 130.2 bits (326), Expect = 2.4e-26
Identity = 74/160 (46.25%), Postives = 90/160 (56.25%), Query Frame = 0
Query: 120 MGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIR--------------- 179
M EKVPPKFKLPAIK++DG+TDP+DHLD Y +W DIY GI + IR
Sbjct: 1 MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIY-GITEAIRCRVFSFTLTGSTRIW 60
Query: 180 ----RRSELESTSGLP-----------------------PDRKAESLHDYVARFNEEKLQ 238
+R + S L + ESL DYVARFN+EKLQ
Sbjct: 61 FQQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQ 120
BLAST of Moc11g27970 vs. ExPASy TrEMBL
Match:
A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)
HSP 1 Score: 221.5 bits (563), Expect = 3.8e-54
Identity = 129/240 (53.75%), Postives = 149/240 (62.08%), Query Frame = 0
Query: 45 TRQR-----PPKEKGKRPKSLPNGDKDEHNARGDLGPVDLDKEKPGERPELSEKQLSFKE 104
TRQR P K K + PNG K +H+ R P+ LDK KP +RPE SEK+ S KE
Sbjct: 106 TRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNS-EPISLDKGKPADRPESSEKRHSHKE 165
Query: 105 KGFDLEELIDQVDSSFIKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGI 164
KGFDLEEL+DQ DS F +EIM EKVPPKFKLP +KQFD TTDPVDHLDAYR+WMDIY G+
Sbjct: 166 KGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIY-GV 225
Query: 165 YDPIR-------------------RRSELESTSGLP-----------------------P 224
+ +R +R + S L
Sbjct: 226 SEAVRCRVFSTTLNGSARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIK 285
Query: 225 DRKAESLHDYVARFNEEKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
R ESL DYVARFNEEKLQV GLTDAVS+LAFMSG+RDEHLSF FGK+TP+TF+EALSR
Sbjct: 286 QRTTESLRDYVARFNEEKLQVEGLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSR 343
BLAST of Moc11g27970 vs. ExPASy TrEMBL
Match:
A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)
HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51
Identity = 124/226 (54.87%), Postives = 146/226 (64.60%), Query Frame = 0
Query: 55 KRPKSL-PNGDKDEHNARGDLGPVDLDKEKPGERPELSEKQLSFKEKGFDLEELIDQVDS 114
K+ KSL PNG K++H+ R P+ L+K KP +RPE SEK+ + KEKGFDLEEL+ Q DS
Sbjct: 25 KQHKSLAPNGSKNDHDNRNS-EPISLNKGKPIDRPESSEKRHNQKEKGFDLEELLGQADS 84
Query: 115 SFIKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIR--------- 174
F +EIM EKVPPKFKLP +K FDG T+PVDHLDAYR+WMDIY G+ D IR
Sbjct: 85 PFTEEIMREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIY-GVSDAIRCRVFSTTLN 144
Query: 175 ----------RRSELESTSGLP-----------------------PDRKAESLHDYVARF 234
+R + S L R AESLHDYVARF
Sbjct: 145 GSARIWFRQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDYVARF 204
Query: 235 NEEKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
NEEKLQ+ GLTDAVS+LAFMSG+RDEHLSF F K+TPSTF+EALSR
Sbjct: 205 NEEKLQLEGLTDAVSLLAFMSGVRDEHLSFSFEKRTPSTFSEALSR 248
BLAST of Moc11g27970 vs. ExPASy TrEMBL
Match:
A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 5.7e-34
Identity = 86/164 (52.44%), Postives = 100/164 (60.98%), Query Frame = 0
Query: 116 IKEIMGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIR----------- 175
++EIM KVPPKFKLP +KQFDGT D VDHLDAYR+WMDIY G+ + ++
Sbjct: 1 MEEIMKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIY-GVSEAVKCRVFSTTLSGS 60
Query: 176 --------RRSELESTSGLP-----------------------PDRKAESLHDYVARFNE 235
+R + S L R ESLHDYVARFNE
Sbjct: 61 ARVWFRQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDYVARFNE 120
Query: 236 EKLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
EKLQV GLT+AVS++AFMS IRDEHLSF FGKKTPSTF+EALSR
Sbjct: 121 EKLQVEGLTNAVSLMAFMSDIRDEHLSFSFGKKTPSTFSEALSR 163
BLAST of Moc11g27970 vs. ExPASy TrEMBL
Match:
A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28
Identity = 96/223 (43.05%), Postives = 113/223 (50.67%), Query Frame = 0
Query: 17 LGREGRGYVP--AHDPTASAVRAERGKPTATRQRPPKEKGKRPKSLPNGDKDEHNARGDL 76
LGREG G P DP R P++ + K PNG K +H R
Sbjct: 7 LGREGLGPDPMLGLDPVLGP-RPSSDPPSSIHDFAQQHK----SPAPNGGKSDHEDRSS- 66
Query: 77 GPVDLDKEKPGERPELSEKQLSFKEKGFDLEELIDQVDSSFIKEIMGEKVPPKFKLPAIK 136
P+ LDK KP +RPE SEK+ + K+KGFDLEEL+DQ DS F +EIM EK
Sbjct: 67 EPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSPFTEEIMREK----------- 126
Query: 137 QFDGTTDPVDHLDAYRKWMDIYGGIYDPIRRRSELESTSGLPPDRKAESLHDYVARFNEE 196
R ESLHDYV RFN+E
Sbjct: 127 --------------------------------------------RTTESLHDYVTRFNKE 168
Query: 197 KLQVGGLTDAVSILAFMSGIRDEHLSFLFGKKTPSTFAEALSR 238
KLQV GLTDAVS+LAF+ G+RDEHLSF FGK+TPSTF+EALSR
Sbjct: 187 KLQVEGLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSR 168
BLAST of Moc11g27970 vs. ExPASy TrEMBL
Match:
A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 74/160 (46.25%), Postives = 90/160 (56.25%), Query Frame = 0
Query: 120 MGEKVPPKFKLPAIKQFDGTTDPVDHLDAYRKWMDIYGGIYDPIR--------------- 179
M EKVPPKFKLPAIK++DG+TDP+DHLD Y +W DIY GI + IR
Sbjct: 1 MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIY-GITEAIRCRVFSFTLTGSTRIW 60
Query: 180 ----RRSELESTSGLP-----------------------PDRKAESLHDYVARFNEEKLQ 238
+R + S L + ESL DYVARFN+EKLQ
Sbjct: 61 FQQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDYVARFNKEKLQ 120
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWY0 | 3.8e-54 | 53.75 | uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1E1E7 | 1.0e-51 | 54.87 | uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1D7D2 | 5.7e-34 | 52.44 | uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1CNT2 | 1.2e-28 | 43.05 | uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A6J1D3B7 | 1.2e-26 | 46.25 | uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
Match Name | E-value | Identity | Description | |