Moc11g27900 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g27900
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 20391925 .. 20394114 (+)
RNA-Seq Expression	Moc11g27900
Synteny	Moc11g27900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACAATACCTAAAGGAAACTTGGTCTGCTCAGCCCTAGAGAGCGTCGACTCGGCACTAAGATTTACTGCCAAAGTAAGTAAGCTTAAGCTTACCATCTCAAAGCAACGTATGTCTTTTTCCTCCACTCGAAACATGCCACATGTGAGGTCGAAAATCACCTCCAACATTGGCCCTCACTGTGCTGATGCGCCACTTCGGTTCAACTCAGTGGCGTGGTTGAGTGGAAAACTGATCAGAAGCTTCCCAAAAAGAACTGGAAGGTGAACGGTCGAGCTGACGTAAAGTGACATCATGCTTAGTTGGTTTTGGTAGGATCGCATCTGGACCGTTGGATTTGAATGTAGCGAATGACAGATATGTCTTCACTAAATGCTATAAATAGGATGACTCACTTTGTCCTTTTGTCTCACTTGAAAACACAAAGGGGCGCTAACGAACCCTCAGGTTGCGTGAGCATTTAGACAACCCCCTACCTAGGTGGGTCGGACTATACCCACAGATGTTTAAATGGGGAGTCCATCTTCCACTTCATCCCTTCATGCAGCATTTTTTGTCAGCCACAAACTTGGCCCCATCTCAGCTTGTCCCTAACGGACGGGCTACCTTGCTGGGTTTATACTACACCTGGTAGGGCTTCAGTGCAGGTGAGGCTGACCTGCTGCTAGATGTGGGCCAAATTTTAGCGACTCACCTGATAAAGTCTTACATGGAGTTTCCGGGTCTGCACTATATATCTACTCGGAACACCTTCGCCAAAGTCATCCATACTCCCTTAACTAACAAAATTTGGAGGGATAAATGGTTCCTCGTCTCGGGGGGTTGGCTGGCCACCGTGAATGGGGAGCCATGCTGCCAAGTCCCAACCGAATTTGGGGAAGTAGGTAAGTCCTTAGTGGTCGGTCTTTCTTAAGGCTCAACTCACCATGGAATATTTAACGGTCCTCTTTTCTTTTGCAGCACTCCCGCGCCTCCACCTCAGATCAGCGGATATTATTTGGAAGTCAAAGAGAGGGTGCGAAAATTAGACAAACTCTGGTACGAGGACATCTTAGACAACATCAACCTCCATCAGTGCAGGCTAGTTCAGCTTGACCACCAACGTACGGAGAGACTAGACACCATGGTTTTGAAACTATACACCTCCATGAATCGAAAATGTCTAGGAAACCAATCAATGCCTTGCGAGACATCTCAGAAGCATGGGAGATCAGGCACAGCTCCACGTGGATCTGAGGGACTGTCTCGCCCTCTCCGAGCTGACCACCTGCAAACTCTGCTGGCCTTTCCCTCATCGTAGCGAAAGAGTCGATCCTCAACCGACTCGAAGGGAAAGCGATCGGATAGGGCCTCATCCCGATCTCCTCCAAAACCAATTAGCATCCACTCCCAAGATGATGCTCAGCCTCCGACCCTGCCAAATAAAGACTTCTCATACCCTTTCAAGTCAAGTTTTGCTGGGGAGTCTGTGCGCGAGGCTGCTGTGAAGGCCTAGAAAACAAGCTCGTCTCGAATGCTTCAGAAGAACGAGAATGTCTTCTTCGAGAAGCCTGGGGAGTACCTCCTATGTCTGATAGATTAGATGGATCGGTTTCACTTCATGGTCTGCCATGCTGTGGCGCTCGTCAGTCAATAGCTAACAGCTCGCAAGGTTAGCTTCACTCGAGAACGTGAGGCCACTAAACAGTCCGAGGAGCTGAAGGCCAAGTTGGCTAAGGCTTGGACAGGATTGAGGAATTGACTAGATCAACCTCCACTCTGGAAAACTTCATCAGTCAGGCTAGGATAGACATCAAAACGGCTGAGACGAGGGCTAAAGAGGCGAAGGAGCAAGCTGAGAAGGAGGCTACGGAGCGAGCTGCTGAGAGGTTGATTATGAGACCAAAATAAAAAATTTTGATGTCCTTGAATCCGCCATGAAGGAGCTCCTATAATTCGACGACCTGGTGCGGGACCTGGTTAACAAAAGGTTCGACATCACCGTCGCTGAGGTGAAAAAGGCTTGCCCCTGATCTGGACCTCGCCCTAGCATATCAGGCATTCGAGGCCTCCATGGAGAAGGACAAGGGCAAAGCTTCAGTTGAAGAGGTCGATGGCGTCCGTGCTGACCAGCAAGGGCTGATAGGGACGCATGATCATTTTGCTTCCTTTGCCATTTCTTGCTTTCATCAAAATTATTTCCTTTAA

mRNA sequence

ATGAGAACAATACCTAAAGGAAACTTGGTCTGCTCAGCCCTAGAGAGCGTCGACTCGGCACTAAGATTTACTGCCAAAGTAAGTAAGCTTAAGCTTACCATCTCAAAGCAACGTATGTCTTTTTCCTCCACTCGAAACATGCCACATGTGAGGTCGAAAATCACCTCCAACATTGGCCCTCACTGTGCTGATGCGCCACTTCGGTTCAACTCAGTGGCGTGGTTGAGTGGAAAACTGATCAGAAGCTTCCCAAAAAGAACTGGAAGCATTTTTTGTCAGCCACAAACTTGGCCCCATCTCAGCTTGTCCCTAACGGACGGGCTACCTTGCTGGGTTTATACTACACCTGGTAGGGCTTCAGTGCAGCACTCCCGCGCCTCCACCTCAGATCAGCGGATATTATTTGGAAGTCAAAGAGAGGGTGCGAAAATTAGACAAACTCTGGAAACCAATCAATGCCTTGCGAGACATCTCAGAAGCATGGGAGATCAGGCACAGCTCCACGTGGATCTGAGGGACTGTCTCGCCCTCTCCGAGCTGACCACCTGCAAACTCTGCTGGCCTTTCCCTCATCTCTGTGCGCGAGGCTGCTGTGAAGGCCTAGAAAACAAGCTCGTCTCGAATGCTTCAGAAGAACGAGAATGTCTTCTTCGAGAAGCCTGGGGAGTACCTCCTATGTCTGATAGATTAGATGGATCGGTTTCACTTCATGGTCTGCCATGCTGTGGCGCTCGTCAGATTGAGGAATTGACTAGATCAACCTCCACTCTGGAAAACTTCATCAGTCAGGCTAGGATAGACATCAAAACGGCTGAGACGAGGGCTAAAGAGGCGAAGGAGCAAGCTGAGAAGGAGGCTACGGAGCGAGCTGCTGAGAGGCTTGCCCCTGATCTGGACCTCGCCCTAGCATATCAGGCATTCGAGGCCTCCATGGAGAAGGACAAGGGCAAAGCTTCAGTTGAAGAGGTCGATGGCGTCCGTGCTGACCAGCAAGGGCTGATAGGGACGCATGATCATTTTGCTTCCTTTGCCATTTCTTGCTTTCATCAAAATTATTTCCTTTAA

Coding sequence (CDS)

ATGAGAACAATACCTAAAGGAAACTTGGTCTGCTCAGCCCTAGAGAGCGTCGACTCGGCACTAAGATTTACTGCCAAAGTAAGTAAGCTTAAGCTTACCATCTCAAAGCAACGTATGTCTTTTTCCTCCACTCGAAACATGCCACATGTGAGGTCGAAAATCACCTCCAACATTGGCCCTCACTGTGCTGATGCGCCACTTCGGTTCAACTCAGTGGCGTGGTTGAGTGGAAAACTGATCAGAAGCTTCCCAAAAAGAACTGGAAGCATTTTTTGTCAGCCACAAACTTGGCCCCATCTCAGCTTGTCCCTAACGGACGGGCTACCTTGCTGGGTTTATACTACACCTGGTAGGGCTTCAGTGCAGCACTCCCGCGCCTCCACCTCAGATCAGCGGATATTATTTGGAAGTCAAAGAGAGGGTGCGAAAATTAGACAAACTCTGGAAACCAATCAATGCCTTGCGAGACATCTCAGAAGCATGGGAGATCAGGCACAGCTCCACGTGGATCTGAGGGACTGTCTCGCCCTCTCCGAGCTGACCACCTGCAAACTCTGCTGGCCTTTCCCTCATCTCTGTGCGCGAGGCTGCTGTGAAGGCCTAGAAAACAAGCTCGTCTCGAATGCTTCAGAAGAACGAGAATGTCTTCTTCGAGAAGCCTGGGGAGTACCTCCTATGTCTGATAGATTAGATGGATCGGTTTCACTTCATGGTCTGCCATGCTGTGGCGCTCGTCAGATTGAGGAATTGACTAGATCAACCTCCACTCTGGAAAACTTCATCAGTCAGGCTAGGATAGACATCAAAACGGCTGAGACGAGGGCTAAAGAGGCGAAGGAGCAAGCTGAGAAGGAGGCTACGGAGCGAGCTGCTGAGAGGCTTGCCCCTGATCTGGACCTCGCCCTAGCATATCAGGCATTCGAGGCCTCCATGGAGAAGGACAAGGGCAAAGCTTCAGTTGAAGAGGTCGATGGCGTCCGTGCTGACCAGCAAGGGCTGATAGGGACGCATGATCATTTTGCTTCCTTTGCCATTTCTTGCTTTCATCAAAATTATTTCCTTTAA

Protein sequence

MRTIPKGNLVCSALESVDSALRFTAKVSKLKLTISKQRMSFSSTRNMPHVRSKITSNIGPHCADAPLRFNSVAWLSGKLIRSFPKRTGSIFCQPQTWPHLSLSLTDGLPCWVYTTPGRASVQHSRASTSDQRILFGSQREGAKIRQTLETNQCLARHLRSMGDQAQLHVDLRDCLALSELTTCKLCWPFPHLCARGCCEGLENKLVSNASEERECLLREAWGVPPMSDRLDGSVSLHGLPCCGARQIEELTRSTSTLENFISQARIDIKTAETRAKEAKEQAEKEATERAAERLAPDLDLALAYQAFEASMEKDKGKASVEEVDGVRADQQGLIGTHDHFASFAISCFHQNYFL

Homology

The following BLAST results are available for this feature:

BLAST of Moc11g27900 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g27900 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g27900 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g27900 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 261..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g27900.1	Moc11g27900.1	mRNA