Moc11g27470 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g27470
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 20129093 .. 20130928 (-)
RNA-Seq Expression	Moc11g27470
Synteny	Moc11g27470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTCGGACCGCCCCCGGTGCCAGAGACATCGGCACGATGAAGTTTCCGGCGACGCTTCTGATTATAGGAGGACTAGACCAAGTGCGAGATTGGAATATAAAGTACTACGAGTGGCTAAAAGGAGAAGGAAAAGAAGTGGATTTGGTAGAATATCAAAATGCCATCCATGATTTTTATCCAATTCCTGAGCTGCTCAGTTCTTCATCGCTAATCAAACATACGAGTGATTTCATCAAGAAACACTCGGCTTCGGCTGTGTAAGTTCCTTTCAGATATAAATTATAAGTTTGATGTTTGATACTAGGTTTTGCAATGTATTTATTTATCGTACTTATCTACTAGATTCCCGAACTTCAATTTTGTATCTAATAAATCACTAAATTTGTTGGGTTAATTTTATTAGTCTAACTTGTTTGGACATGTGTGAAATCAATTTGGGGTGTAACATATAAAAGCATTAGCTTTAGAGTTGATGATACCAGTACTACTAGAAATAAACTTTTTACTAACACGGAAAATCGTTGGAAAAAGTATTATTGGGCCATGGATTCAATTTGGGCCCATCTTTTCATGTGCTAAAAACTTATTTTGTGGGATTGTTGTCGATATAATTTTTTTTTTAAACAAAAGAAGCTCCCACTTGTTTAGCTAGTGTACCTTTTTGTGGTGGAGAAGAAAAAAGGCACCTGGATTGGTTTTGATTTCCTCTTGTGCGGCAGTACAGAAAGCAAAGGGGGGGAGGGTGGTTTTCTTTTGTGAAATCTCTTGGTTGTTTTTCTCACCATTTGTATTATTCATCTTGAAGGTGATCAGTAGCTACTTGTTGGGTGAGTTCTAGGATTTTGTTGGCTCATTGTTGTTGAGAATACTCTGTGTATTTTGTTGGCTCATTGTTTTTGAGAATACTCTGTGTATTTTGTTGTTACTCTTGGTGATATGAATGGAATAGATGGATGGTCACAGTGGATGTAGATCACGTTGATCGAACCACTATAAATCAGTGTGTTATTTCTTCTCTCTTACTCATTTATTTTTGTTGAATTTATCGTTGGAACTTAGTTAGTTGTTATTATATATTTTCTGAAATTATTGGTGGTGTTAGCCTAAGTTAGAATTACCCAACAAGTGATATCAGAGCCTCGTTTGAGCATTTTTTACACCAAGCTTTTATCAGAAATTTTGGAAAGATTTTTATTAGTGAATCTTGAAAATGACTACTAAGTTTCAACTAGAGAAATTTGATGGTAAGGGAGATTTTGGATTATGGAAAAAGAAAATAATAGCGCTTTTAGTGCAATAAAAAATTGCAAAAGCTCTTGATGATCCAAAGAAGTACCCTGTTGAAAAGAACAAGAGAAAGAAGAAATGCTAGATTTAGCCTTAGTACACTGATCTTGTATTTGTCGGATAATGTTCTATGATACGTTAATGATGCCACCACAACCTTACAGATATGGCAAAAGTTGGATAAATTATATCTTGTCAAGTCTTTGCCGAACAAGATATATCTCAAGGAGAAATTCTTTGGTTTTAGGATGGATCCTTCAAAACAATTAGATGCAAATTTAGACAAGTTGAACAAAATTGTCCTTGATTTAGCTAACATTGGAGAGAAAATGTCTGAAGAAAATCAAGCGGTAATTTTGTTAAATTCACTGCCCGATTCATATAGAGAAATCAAGACAGCAATTAAGTACGAAAGAGACAACTTGGATATGGAAATAGTTCTGAATGCTTTGAAATCAAAAGAACTTGAGATCAAGCTGGAGAAGAAGGACAGTGAAGCACTGTATACTCAGGGTAGAGCAGAGAAGAAAAATTATAGCAAGTAG

mRNA sequence

ATGTGTTCGGACCGCCCCCGGTGCCAGAGACATCGGCACGATGAAGTTTCCGGCGACGCTTCTGATTATAGGAGGACTAGACCAAGTGCGAGATTGGAATATAAAATATGGCAAAAGTTGGATAAATTATATCTTGTCAAGTCTTTGCCGAACAAGATATATCTCAAGGAGAAATTCTTTGGTTTTAGGATGGATCCTTCAAAACAATTAGATGCAAATTTAGACAAGTTGAACAAAATTGTCCTTGATTTAGCTAACATTGGAGAGAAAATGTCTGAAGAAAATCAAGCGGTAATTTTGTTAAATTCACTGCCCGATTCATATAGAGAAATCAAGACAGCAATTAAGTACGAAAGAGACAACTTGGATATGGAAATAGTTCTGAATGCTTTGAAATCAAAAGAACTTGAGATCAAGCTGGAGAAGAAGGACAGTGAAGCACTGTATACTCAGGGTAGAGCAGAGAAGAAAAATTATAGCAAGTAG

Coding sequence (CDS)

ATGTGTTCGGACCGCCCCCGGTGCCAGAGACATCGGCACGATGAAGTTTCCGGCGACGCTTCTGATTATAGGAGGACTAGACCAAGTGCGAGATTGGAATATAAAATATGGCAAAAGTTGGATAAATTATATCTTGTCAAGTCTTTGCCGAACAAGATATATCTCAAGGAGAAATTCTTTGGTTTTAGGATGGATCCTTCAAAACAATTAGATGCAAATTTAGACAAGTTGAACAAAATTGTCCTTGATTTAGCTAACATTGGAGAGAAAATGTCTGAAGAAAATCAAGCGGTAATTTTGTTAAATTCACTGCCCGATTCATATAGAGAAATCAAGACAGCAATTAAGTACGAAAGAGACAACTTGGATATGGAAATAGTTCTGAATGCTTTGAAATCAAAAGAACTTGAGATCAAGCTGGAGAAGAAGGACAGTGAAGCACTGTATACTCAGGGTAGAGCAGAGAAGAAAAATTATAGCAAGTAG

Protein sequence

MCSDRPRCQRHRHDEVSGDASDYRRTRPSARLEYKIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEENQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRAEKKNYSK

Homology

[Close]

BLAST of Moc11g27470 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 8.3e-39
Identity = 84/125 (67.20%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NLD+  KIV+DL NIGEKMS+E
Sbjct: 82  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDE 141

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY RD+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 142 NQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 201

Query: 155 EKKNY 160
           EKK++
Sbjct: 202 EKKSW 206

[Close]

BLAST of Moc11g27470 vs. NCBI nr
Match: TYK10877.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 5.4e-38
Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NL +  KIV+DL NIGEKMS+E
Sbjct: 29  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLGEFQKIVVDLNNIGEKMSDE 88

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY RD+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 89  NQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 148

Query: 155 EKKNY 160
           EKK++
Sbjct: 149 EKKSW 153

[Close]

BLAST of Moc11g27470 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-37
Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSL NKIY+KEKFFG++MD SK L+ NLD+  KIV+DL NIGEKMS+E
Sbjct: 82  ELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDE 141

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY RD+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 142 NQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 201

Query: 155 EKKNY 160
           EKK++
Sbjct: 202 EKKSW 206

[Close]

BLAST of Moc11g27470 vs. NCBI nr
Match: KAA0047995.1 (retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-37
Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NLD+  KIV+DL NIGEKMS+E
Sbjct: 82  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDEFQKIVVDLNNIGEKMSDE 141

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY  D+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 142 NQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 201

Query: 155 EKKNY 160
           EKK++
Sbjct: 202 EKKSW 206

[Close]

BLAST of Moc11g27470 vs. NCBI nr
Match: KAA0038009.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK02203.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-36
Identity = 79/125 (63.20%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NL++  KIV+DL NIGEKMS+E
Sbjct: 83  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLNEFQKIVVDLNNIGEKMSDE 142

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQA+ILLNSLP++YRE+K AIKY RD+L M IV +ALK++ L+IK E+KD E L  +GR+
Sbjct: 143 NQAIILLNSLPETYREVKAAIKYGRDSLTMSIVFDALKTRNLKIKKERKDGELLMARGRS 202

Query: 155 EKKNY 160
           +KK +
Sbjct: 203 DKKKW 207

[Close]

BLAST of Moc11g27470 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16
Identity = 43/118 (36.44%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 36  IWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEEN 95
           IW +L+ LY+ K+L NK+YLK++ +   M       ++L+  N ++  LAN+G K+ EE+
Sbjct: 84  IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEED 143

Query: 96  QAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGR 154
           +A++LLNSLP SY  + T I + +  ++++ V +AL   E   K  +   +AL T+GR
Sbjct: 144 KAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGR 201

[Close]

BLAST of Moc11g27470 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39
Identity = 84/125 (67.20%), Postives = 107/125 (85.60%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NLD+  KIV+DL NIGEKMS+E
Sbjct: 82  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDE 141

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY RD+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 142 NQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 201

Query: 155 EKKNY 160
           EKK++
Sbjct: 202 EKKSW 206

[Close]

BLAST of Moc11g27470 vs. ExPASy TrEMBL
Match: A0A5D3CFX6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00490 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.6e-38
Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NL +  KIV+DL NIGEKMS+E
Sbjct: 29  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLGEFQKIVVDLNNIGEKMSDE 88

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY RD+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 89  NQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 148

Query: 155 EKKNY 160
           EKK++
Sbjct: 149 EKKSW 153

[Close]

BLAST of Moc11g27470 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.8e-38
Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSL NKIY+KEKFFG++MD SK L+ NLD+  KIV+DL NIGEKMS+E
Sbjct: 82  ELWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDE 141

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY RD+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 142 NQAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 201

Query: 155 EKKNY 160
           EKK++
Sbjct: 202 EKKSW 206

[Close]

BLAST of Moc11g27470 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.6e-38
Identity = 83/125 (66.40%), Postives = 106/125 (84.80%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NLD+  KIV+DL NIGEKMS+E
Sbjct: 82  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKILEENLDEFQKIVVDLNNIGEKMSDE 141

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQAVILLNSLP++YRE+K AIKY  D+L M IVL+ALK++ LEIK E+KD E L  +GR+
Sbjct: 142 NQAVILLNSLPETYREVKAAIKYGWDSLTMSIVLDALKTRNLEIKKERKDGELLMARGRS 201

Query: 155 EKKNY 160
           EKK++
Sbjct: 202 EKKSW 206

[Close]

BLAST of Moc11g27470 vs. ExPASy TrEMBL
Match: A0A5D3BRB2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00070 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.9e-37
Identity = 79/125 (63.20%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 35  KIWQKLDKLYLVKSLPNKIYLKEKFFGFRMDPSKQLDANLDKLNKIVLDLANIGEKMSEE 94
           ++W+KL+ LYL KSLPNKIY+KEKFFG++MD SK L+ NL++  KIV+DL NIGEKMS+E
Sbjct: 83  ELWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLNEFQKIVVDLNNIGEKMSDE 142

Query: 95  NQAVILLNSLPDSYREIKTAIKYERDNLDMEIVLNALKSKELEIKLEKKDSEALYTQGRA 154
           NQA+ILLNSLP++YRE+K AIKY RD+L M IV +ALK++ L+IK E+KD E L  +GR+
Sbjct: 143 NQAIILLNSLPETYREVKAAIKYGRDSLTMSIVFDALKTRNLKIKKERKDGELLMARGRS 202

Query: 155 EKKNY 160
           +KK +
Sbjct: 203 DKKKW 207

The following BLAST results are available for this feature:

BLAST of Moc11g27470 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK25306.1	8.3e-39	67.20	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK10877.1	5.4e-38	66.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0050719.1	1.2e-37	66.40	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0047995.1	1.6e-37	66.40	retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa...	[more]
KAA0038009.1	1.0e-36	63.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Moc11g27470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.6e-16	36.44	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc11g27470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNU1	4.0e-39	67.20	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3CFX6	2.6e-38	66.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UB25	5.8e-38	66.40	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5A7U2U7	7.6e-38	66.40	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5D3BRB2	4.9e-37	63.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Moc11g27470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 33..135 e-value: 3.4E-25 score: 88.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR34676:SF12	ZINC FINGER, CCHC-TYPE, RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN PROTEIN-RELATED	coord: 36..122
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 36..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g27470.1	Moc11g27470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0042393	histone binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding