Moc11g27400 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g27400
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 20044539 .. 20045613 (-)
RNA-Seq ExpressionMoc11g27400
SyntenyMoc11g27400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCAGATAGCGATGTTGAAGGAGCACTTGTAAAGCATCGGGAAAACAGTGGAGTGGCCTTAGACAAACTGATAGATGCAAATGGAGGCCGACCCATACCAATTTCCTGGATTGTAGAAGCTGGCAAACCTGTGGGATATCTCGCCAGTTTATTCAATATCGAGATCAGTCGTCTGACTCGTTGGAATGTACCTTTAGACATTAAGAAGAAAAATGATATTCCAGATCATACATATAATGCCATAATTGAATTTTTGTTGGTAAGATATGTTATTATGTATCTAATTATCATATAGTTTAGTGAAATTAATGTGATGCTATCTATTTTCATTGGTTTACATATACATAATAAATTTGAGGTGGAACTTCATGTTAAACATCACTTCGATAATTTCAAGTACGAGATCGGGACCCGCTACAAAGATTATCGACACCAATTACGTAGGTACTATTGTGATTTTGAAGGTCCAGAAACGACTCGACTACGACCCTACGGACGAATTACACAAGATGTTTGGAATATGTTGTGTGATAGATGGAAAACTAGTGAATGGAAGGTAACTAATAACTGAAGTTGATTACTAATAATTATAAATAGTGATATATATATCTATTCTTGTTGTAGGCAAAGTCCGTTAGAAACAAAGTTAGTAAGAGTAAATTGCCATTTAATCATCGCGCTTGCCCAAAATCATTTTTATCCCATCTAGAAGACAAGGTACAAAGTTGTTTGTGGTAGTATAATATATGCTTTGATTGTTAGTATATTAAATAACCTATTGGAATAGAAAAAGGAATATGAGACGTATTTGAACCTTTTCGAATTGTTTTTCGCAACACATTGCCATCCAAGAAAGGGTTGGACTGACGAAGCTGCTCCTATTGCATATGTAAGTACTCATTTTAATAATGTAAATTTAATGATAATATTTATTCAGAATTCTAACTTAATATATTTCTTGTGGTAGGAAAAATGGTGGAGTTAGGTGGAAAAAGCAAAGCCACCAAGTCAGAAACAGGCAGCAGCATACTCTCAGGAATATGTTTAGGCTTTGGAGGCTAGAGTTGTGA

mRNA sequence

ATGTCTTCAGATAGCGATGTTGAAGGAGCACTTGTAAAGCATCGGGAAAACAGTGGAGTGGCCTTAGACAAACTGATAGATGCAAATGGAGGCCGACCCATACCAATTTCCTGGATTGTAGAAGCTGGCAAACCTGTGGGATATCTCGCCAGTTTATTCAATATCGAGATCAGTCGTCTGACTCGTTGGAATGTACCTTTAGACATTAAGAAGAAAAATGATATTCCAGATCATACATATAATGCCATAATTGAATTTTTGTTGGTCCAGAAACGACTCGACTACGACCCTACGGACGAATTACACAAGATGTTTGGAATATGTTGTGTGATAGATGGAAAACTAGTGAATGGAAGGAAAAATGGTGGAGTTAGGTGGAAAAAGCAAAGCCACCAAGTCAGAAACAGGCAGCAGCATACTCTCAGGAATATGTTTAGGCTTTGGAGGCTAGAGTTGTGA

Coding sequence (CDS)

ATGTCTTCAGATAGCGATGTTGAAGGAGCACTTGTAAAGCATCGGGAAAACAGTGGAGTGGCCTTAGACAAACTGATAGATGCAAATGGAGGCCGACCCATACCAATTTCCTGGATTGTAGAAGCTGGCAAACCTGTGGGATATCTCGCCAGTTTATTCAATATCGAGATCAGTCGTCTGACTCGTTGGAATGTACCTTTAGACATTAAGAAGAAAAATGATATTCCAGATCATACATATAATGCCATAATTGAATTTTTGTTGGTCCAGAAACGACTCGACTACGACCCTACGGACGAATTACACAAGATGTTTGGAATATGTTGTGTGATAGATGGAAAACTAGTGAATGGAAGGAAAAATGGTGGAGTTAGGTGGAAAAAGCAAAGCCACCAAGTCAGAAACAGGCAGCAGCATACTCTCAGGAATATGTTTAGGCTTTGGAGGCTAGAGTTGTGA

Protein sequence

MSSDSDVEGALVKHRENSGVALDKLIDANGGRPIPISWIVEAGKPVGYLASLFNIEISRLTRWNVPLDIKKKNDIPDHTYNAIIEFLLVQKRLDYDPTDELHKMFGICCVIDGKLVNGRKNGGVRWKKQSHQVRNRQQHTLRNMFRLWRLEL
Homology
[Close]
BLAST of Moc11g27400 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida])

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-05
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0 

Query: 19  GVALDKLIDANGGRPIPISWIVEAGKPVGYLASLFNIEISRLTRWNVPLDIKKKNDIPDH 78
           GV L+K   A  GR I ++W    GKP+G +ASLFN EI  L R  +PL  +K+ DIP+ 
Sbjct: 143 GVRLNK-TTATMGR-IKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQKDIPNE 202

Query: 79  TYNAIIEFLLVQKRLD 95
            Y+ + E LL Q  +D
Sbjct: 203 LYDILTEQLLNQFDVD 216

[Close]
BLAST of Moc11g27400 vs. NCBI nr
Match: XP_038895320.1 (uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida])

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-05
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0 

Query: 19  GVALDKLIDANGGRPIPISWIVEAGKPVGYLASLFNIEISRLTRWNVPLDIKKKNDIPDH 78
           GV L+K   A  GR I ++W    GKP+G +ASLFN EI  L R  +PL  +K+ DIP+ 
Sbjct: 143 GVRLNK-TTATMGR-IKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQKDIPNE 202

Query: 79  TYNAIIEFLLVQKRLD 95
            Y+ + E LL Q  +D
Sbjct: 203 LYDILTEQLLNQFDVD 216

[Close]
BLAST of Moc11g27400 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida])

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-05
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0 

Query: 19  GVALDKLIDANGGRPIPISWIVEAGKPVGYLASLFNIEISRLTRWNVPLDIKKKNDIPDH 78
           GV L+K   A  GR I ++W    GKP+G +ASLFN EI  L R  +PL  +K+ DIP+ 
Sbjct: 143 GVRLNK-TTATMGR-IKVTWTPTQGKPIGDMASLFNGEIGVLVRKFIPLKYEKQKDIPNE 202

Query: 79  TYNAIIEFLLVQKRLD 95
            Y+ + E LL Q  +D
Sbjct: 203 LYDILTEQLLNQFDVD 216

The following BLAST results are available for this feature:
BLAST of Moc11g27400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895321.17.4e-0544.74uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida][more]
XP_038895320.17.4e-0544.74uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida][more]
XP_038895319.17.4e-0544.74uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida][more]
BLAST of Moc11g27400 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g27400 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g27400 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g27400.1Moc11g27400.1mRNA