Moc11g27340 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g27340
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF4218 domain-containing protein
Location	chr11: 19997050 .. 19997586 (-)
RNA-Seq Expression	Moc11g27340
Synteny	Moc11g27340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACGTCATAAGTTAGATGTTATCTCTGTTGAAAGAAGTATATGTGATAACTTGTTAAACACTTTGTTAGACATGGATGGGAAGACCACTGATACTTTATTGGCACGTTTAGATCTAGAGGACTTAGAAGTACGAAAAGAGCTACATATTCAGAAAAATGGGGACAAATATTTAAAACCACATGCTTCATACACGTTAGCTGCTAATGAGAGGGTGAACTTTTGCAAGTTCTTAAGATCGGTTAAATTTCCCTTTGGGTTTCCTTCACGTATATCGCAATGTGTGAATGTTAGAGAAGGAACAATTTCGGGATTAGAAAGCTATGATTTTCATATACTATTACATCGGCTTCTCCCAATCGGTATTCTTACATATTTACAAGATCAAATATGCACAACAATTACAGAGATGTCTATCTTCTTTCGGAAGTTATGTGCAAAAACAATACAATCTCAAGACTTGGACAAGTTACAAGATGAAATTGTTAAGATATTGTGCAAGTTTGAAAAGTTATTTCCTCCTACTTTTTTATGA

mRNA sequence

ATGCTACGTCATAAGTTAGATGTTATCTCTGTTGAAAGAAGTATATGTGATAACTTGTTAAACACTTTGTTAGACATGGATGGGAAGACCACTGATACTTTATTGGCACGTTTAGATCTAGAGGACTTAGAAGTACGAAAAGAGCTACATATTCAGAAAAATGGGGACAAATATTTAAAACCACATGCTTCATACACGTTAGCTGCTAATGAGAGGGTGAACTTTTGCAAGTTCTTAAGATCGGTTAAATTTCCCTTTGGGTTTCCTTCACGTATATCGCAATGTGTGAATGTTAGAGAAGGAACAATTTCGGGATTAGAAAGCTATGATTTTCATATACTATTACATCGGCTTCTCCCAATCGGTATTCTTACATATTTACAAGATCAAATATGCACAACAATTACAGAGATGTCTATCTTCTTTCGGAAGTTATGTGCAAAAACAATACAATCTCAAGACTTGGACAAGTTACAAGATGAAATTGTTAAGATATTGTGCAAGTTTGAAAAGTTATTTCCTCCTACTTTTTTATGA

Coding sequence (CDS)

ATGCTACGTCATAAGTTAGATGTTATCTCTGTTGAAAGAAGTATATGTGATAACTTGTTAAACACTTTGTTAGACATGGATGGGAAGACCACTGATACTTTATTGGCACGTTTAGATCTAGAGGACTTAGAAGTACGAAAAGAGCTACATATTCAGAAAAATGGGGACAAATATTTAAAACCACATGCTTCATACACGTTAGCTGCTAATGAGAGGGTGAACTTTTGCAAGTTCTTAAGATCGGTTAAATTTCCCTTTGGGTTTCCTTCACGTATATCGCAATGTGTGAATGTTAGAGAAGGAACAATTTCGGGATTAGAAAGCTATGATTTTCATATACTATTACATCGGCTTCTCCCAATCGGTATTCTTACATATTTACAAGATCAAATATGCACAACAATTACAGAGATGTCTATCTTCTTTCGGAAGTTATGTGCAAAAACAATACAATCTCAAGACTTGGACAAGTTACAAGATGAAATTGTTAAGATATTGTGCAAGTTTGAAAAGTTATTTCCTCCTACTTTTTTATGA

Protein sequence

MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLKPHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLPIGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTFL

Homology

[Close]

BLAST of Moc11g27340 vs. NCBI nr
Match: KAA0056748.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 231.1 bits (588), Expect = 7.5e-57
Identity = 107/177 (60.45%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDV+ +E+++CDNL+ TLL+++GKT DT  ARLDL+DL++RK+LH+ + G++ +K
Sbjct: 378 LLRHKLDVMHIEKNVCDNLIGTLLNIEGKTNDTTNARLDLQDLKIRKDLHLVEVGNRLVK 437

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHASYTL  +ERV FCKFL+SVKFP GF S IS+CV+ REG ISGL+ +D H+LLHRLLP
Sbjct: 438 PHASYTLTTSERVEFCKFLKSVKFPDGFVSNISRCVHEREGKISGLKMHDCHVLLHRLLP 497

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IGI  +L   + T ITE+  FFR LCA+TI+  DLD+LQ +I+ ILCK E++FPP F
Sbjct: 498 IGIRAFLPKNVYTAITELCNFFRDLCARTIRVSDLDRLQADIIIILCKLERIFPPAF 554

[Close]

BLAST of Moc11g27340 vs. NCBI nr
Match: KAA0059058.1 (uncharacterized protein E6C27_scaffold233G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-56
Identity = 105/177 (59.32%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDV+ +E+++CDNL+ TLL+++GKT DT   RLDL+DL++RK+LH+ + G++ +K
Sbjct: 345 LLRHKLDVMHIEKNVCDNLIGTLLNIEGKTKDTTNTRLDLQDLKIRKDLHLVEVGNRLVK 404

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHASYTL  +ERV FCKFL+SVKFP GF S IS+CV+ REG ISGL+++D H+LLHRLLP
Sbjct: 405 PHASYTLTTSERVEFCKFLKSVKFPDGFVSNISRCVHEREGKISGLKTHDCHVLLHRLLP 464

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IGI  +L   + T IT++  FFR LCA+TI+  DLD+LQ +I+ ILCK E++FPP F
Sbjct: 465 IGIRAFLPKNVYTAITKLCNFFRDLCARTIRVSDLDRLQADIIIILCKLERIFPPAF 521

[Close]

BLAST of Moc11g27340 vs. NCBI nr
Match: KAA0066286.1 (uncharacterized protein E6C27_scaffold21G003350 [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-55
Identity = 105/177 (59.32%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDV+ +E+++CDNL+ TLL+++GKT DT  ARLDL+DL++RK+LH+ + G++ +K
Sbjct: 292 LLRHKLDVMHIEKNVCDNLIGTLLNIEGKTKDTTNARLDLQDLKIRKDLHLVEVGNRLVK 351

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHASYTL  +ERV FCKFL+SVKFP GF S IS+CV+ REG ISGL+++D H+LLH+LLP
Sbjct: 352 PHASYTLTTSERVEFCKFLKSVKFPDGFVSNISRCVHEREGKISGLKTHDCHVLLHQLLP 411

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IGI  +L   + T ITE+  FFR LCA+TI+  DLD+LQ +I+ ILCK E++F P F
Sbjct: 412 IGIRAFLLKNVYTAITELCNFFRNLCARTIRVSDLDRLQADIIIILCKLERIFSPAF 468

[Close]

BLAST of Moc11g27340 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 102/177 (57.63%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDVI +E+++CDNL+ TLL+++ KT DT  ARLDL+DL++RKELH+++ G++++K
Sbjct: 773 LLRHKLDVIHIEKNVCDNLVGTLLNIEEKTKDTTNARLDLQDLKIRKELHLREVGNRFVK 832

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHA+YTL  +ER+ FCKFL+SVKFP GF S ISQCVN  +G I+GL+++D H+LLHRLLP
Sbjct: 833 PHATYTLTNSERIAFCKFLKSVKFPDGFISNISQCVNDNDGKIAGLKTHDCHVLLHRLLP 892

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IG+  YL   +   +TE+  FFR LCAKT++  DL++LQ +I+ ILCK E++FPP F
Sbjct: 893 IGVRAYLPKNVSIAVTELCGFFRDLCAKTMRISDLNRLQSDIIVILCKLERIFPPAF 949

[Close]

BLAST of Moc11g27340 vs. NCBI nr
Match: XP_016899806.1 (PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55
Identity = 102/177 (57.63%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDVI +E+++CDNL+ TLL+++ KT DT  ARLDL+DL++RKELH+++ G++++K
Sbjct: 259 LLRHKLDVIHIEKNVCDNLVGTLLNIEEKTKDTTNARLDLQDLKIRKELHLREVGNRFVK 318

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHA+YTL  +ER+ FCKFL+SVKFP GF S ISQCVN  +G I+GL+++D H+LLHRLLP
Sbjct: 319 PHATYTLTNSERIAFCKFLKSVKFPDGFISNISQCVNDNDGKIAGLKTHDCHVLLHRLLP 378

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IG+  YL   +   +TE+  FFR LCAKT++  DL++LQ +I+ ILCK E++FPP F
Sbjct: 379 IGVRAYLPKNVSIAVTELCGFFRDLCAKTMRISDLNRLQSDIIVILCKLERIFPPAF 435

[Close]

BLAST of Moc11g27340 vs. ExPASy TrEMBL
Match: A0A5A7UNS5 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00220 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.6e-57
Identity = 107/177 (60.45%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDV+ +E+++CDNL+ TLL+++GKT DT  ARLDL+DL++RK+LH+ + G++ +K
Sbjct: 378 LLRHKLDVMHIEKNVCDNLIGTLLNIEGKTNDTTNARLDLQDLKIRKDLHLVEVGNRLVK 437

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHASYTL  +ERV FCKFL+SVKFP GF S IS+CV+ REG ISGL+ +D H+LLHRLLP
Sbjct: 438 PHASYTLTTSERVEFCKFLKSVKFPDGFVSNISRCVHEREGKISGLKMHDCHVLLHRLLP 497

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IGI  +L   + T ITE+  FFR LCA+TI+  DLD+LQ +I+ ILCK E++FPP F
Sbjct: 498 IGIRAFLPKNVYTAITELCNFFRDLCARTIRVSDLDRLQADIIIILCKLERIFPPAF 554

[Close]

BLAST of Moc11g27340 vs. ExPASy TrEMBL
Match: A0A5A7UV28 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00850 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.3e-56
Identity = 105/177 (59.32%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDV+ +E+++CDNL+ TLL+++GKT DT   RLDL+DL++RK+LH+ + G++ +K
Sbjct: 345 LLRHKLDVMHIEKNVCDNLIGTLLNIEGKTKDTTNTRLDLQDLKIRKDLHLVEVGNRLVK 404

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHASYTL  +ERV FCKFL+SVKFP GF S IS+CV+ REG ISGL+++D H+LLHRLLP
Sbjct: 405 PHASYTLTTSERVEFCKFLKSVKFPDGFVSNISRCVHEREGKISGLKTHDCHVLLHRLLP 464

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IGI  +L   + T IT++  FFR LCA+TI+  DLD+LQ +I+ ILCK E++FPP F
Sbjct: 465 IGIRAFLPKNVYTAITKLCNFFRDLCARTIRVSDLDRLQADIIIILCKLERIFPPAF 521

[Close]

BLAST of Moc11g27340 vs. ExPASy TrEMBL
Match: A0A5A7VIW1 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003350 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.8e-56
Identity = 105/177 (59.32%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDV+ +E+++CDNL+ TLL+++GKT DT  ARLDL+DL++RK+LH+ + G++ +K
Sbjct: 292 LLRHKLDVMHIEKNVCDNLIGTLLNIEGKTKDTTNARLDLQDLKIRKDLHLVEVGNRLVK 351

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHASYTL  +ERV FCKFL+SVKFP GF S IS+CV+ REG ISGL+++D H+LLH+LLP
Sbjct: 352 PHASYTLTTSERVEFCKFLKSVKFPDGFVSNISRCVHEREGKISGLKTHDCHVLLHQLLP 411

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IGI  +L   + T ITE+  FFR LCA+TI+  DLD+LQ +I+ ILCK E++F P F
Sbjct: 412 IGIRAFLLKNVYTAITELCNFFRNLCARTIRVSDLDRLQADIIIILCKLERIFSPAF 468

[Close]

BLAST of Moc11g27340 vs. ExPASy TrEMBL
Match: A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 102/177 (57.63%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDVI +E+++CDNL+ TLL+++ KT DT  ARLDL+DL++RKELH+++ G++++K
Sbjct: 773 LLRHKLDVIHIEKNVCDNLVGTLLNIEEKTKDTTNARLDLQDLKIRKELHLREVGNRFVK 832

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHA+YTL  +ER+ FCKFL+SVKFP GF S ISQCVN  +G I+GL+++D H+LLHRLLP
Sbjct: 833 PHATYTLTNSERIAFCKFLKSVKFPDGFISNISQCVNDNDGKIAGLKTHDCHVLLHRLLP 892

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IG+  YL   +   +TE+  FFR LCAKT++  DL++LQ +I+ ILCK E++FPP F
Sbjct: 893 IGVRAYLPKNVSIAVTELCGFFRDLCAKTMRISDLNRLQSDIIVILCKLERIFPPAF 949

[Close]

BLAST of Moc11g27340 vs. ExPASy TrEMBL
Match: A0A1S4DUZ5 (uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 102/177 (57.63%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 1   MLRHKLDVISVERSICDNLLNTLLDMDGKTTDTLLARLDLEDLEVRKELHIQKNGDKYLK 60
           +LRHKLDVI +E+++CDNL+ TLL+++ KT DT  ARLDL+DL++RKELH+++ G++++K
Sbjct: 259 LLRHKLDVIHIEKNVCDNLVGTLLNIEEKTKDTTNARLDLQDLKIRKELHLREVGNRFVK 318

Query: 61  PHASYTLAANERVNFCKFLRSVKFPFGFPSRISQCVNVREGTISGLESYDFHILLHRLLP 120
           PHA+YTL  +ER+ FCKFL+SVKFP GF S ISQCVN  +G I+GL+++D H+LLHRLLP
Sbjct: 319 PHATYTLTNSERIAFCKFLKSVKFPDGFISNISQCVNDNDGKIAGLKTHDCHVLLHRLLP 378

Query: 121 IGILTYLQDQICTTITEMSIFFRKLCAKTIQSQDLDKLQDEIVKILCKFEKLFPPTF 178
           IG+  YL   +   +TE+  FFR LCAKT++  DL++LQ +I+ ILCK E++FPP F
Sbjct: 379 IGVRAYLPKNVSIAVTELCGFFRDLCAKTMRISDLNRLQSDIIVILCKLERIFPPAF 435

The following BLAST results are available for this feature:

BLAST of Moc11g27340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056748.1	7.5e-57	60.45	putative transposase [Cucumis melo var. makuwa]	[more]
KAA0059058.1	4.8e-56	59.32	uncharacterized protein E6C27_scaffold233G00850 [Cucumis melo var. makuwa]	[more]
KAA0066286.1	1.4e-55	59.32	uncharacterized protein E6C27_scaffold21G003350 [Cucumis melo var. makuwa]	[more]
KAA0050152.1	2.4e-55	57.63	uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK...	[more]
XP_016899806.1	2.4e-55	57.63	PREDICTED: uncharacterized protein LOC103487435 [Cucumis melo]	[more]

BLAST of Moc11g27340 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g27340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UNS5	3.6e-57	60.45	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486...	[more]
A0A5A7UV28	2.3e-56	59.32	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7VIW1	6.8e-56	59.32	DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C5I5	1.2e-55	57.63	Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S4DUZ5	1.2e-55	57.63	uncharacterized protein LOC103487435 OS=Cucumis melo OX=3656 GN=LOC103487435 PE=...	[more]

BLAST of Moc11g27340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025452	Domain of unknown function DUF4218	PFAM	PF13960	DUF4218	coord: 145..177 e-value: 1.3E-6 score: 28.1
None	No IPR available	PANTHER	PTHR10775:SF132	SUBFAMILY NOT NAMED	coord: 2..131
None	No IPR available	PANTHER	PTHR10775	UNCHARACTERIZED	coord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g27340.1	Moc11g27340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
molecular_function	GO:0009055	electron transfer activity