Moc11g27330 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g27330
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4216 domain-containing protein
Locationchr11: 19995580 .. 19996015 (-)
RNA-Seq ExpressionMoc11g27330
SyntenyMoc11g27330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGAAAGTGGTACAGTTTGTGCAACCTAGACATTTATGGGACATTCCAGAGATTGAGAATGATGAAGAGGATATTGAAGATCAATCAAGTGAACCTTGGGATCTTGTTATAACACGTAATATGTTTATAAACGGGAGTATGGAGTTCGGTTACTTGAATAGAGCTGATGTCAAGCCTACTGTAGTTGAAGGAAATGTCATGGGATTGAAATTGAATATGCTTGATGATTCAACAACCAATTTGGAGTTAAGTGAAGATGATGATTCACTCCCTGCTTCTAATTCTGACTCATTTGATGCATTAAATTCTCACGACACAGATGGTGAACAAGTATGTGAGTTGTTAATAAAAGTTTTTCATCTTTATTATGTTTTTTAATATCATTTAATCTTTATTGTAATTTCAGGAAGGTGGAATCTGGTCGTCATAG

mRNA sequence

ATGAATTGGAAAGTGGTACAGTTTGTGCAACCTAGACATTTATGGGACATTCCAGAGATTGAGAATGATGAAGAGGATATTGAAGATCAATCAAGTGAACCTTGGGATCTTGTTATAACACGTAATATGTTTATAAACGGGAGTATGGAGTTCGGTTACTTGAATAGAGCTGATGTCAAGCCTACTGTAGTTGAAGGAAATGTCATGGGATTGAAATTGAATATGCTTGATGATTCAACAACCAATTTGGAGTTAAGTGAAGATGATGATTCACTCCCTGCTTCTAATTCTGACTCATTTGATGCATTAAATTCTCACGACACAGATGGTGAACAAGAAGGTGGAATCTGGTCGTCATAG

Coding sequence (CDS)

ATGAATTGGAAAGTGGTACAGTTTGTGCAACCTAGACATTTATGGGACATTCCAGAGATTGAGAATGATGAAGAGGATATTGAAGATCAATCAAGTGAACCTTGGGATCTTGTTATAACACGTAATATGTTTATAAACGGGAGTATGGAGTTCGGTTACTTGAATAGAGCTGATGTCAAGCCTACTGTAGTTGAAGGAAATGTCATGGGATTGAAATTGAATATGCTTGATGATTCAACAACCAATTTGGAGTTAAGTGAAGATGATGATTCACTCCCTGCTTCTAATTCTGACTCATTTGATGCATTAAATTCTCACGACACAGATGGTGAACAAGAAGGTGGAATCTGGTCGTCATAG

Protein sequence

MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVKPTVVEGNVMGLKLNMLDDSTTNLELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS
Homology
BLAST of Moc11g27330 vs. NCBI nr
Match: XP_022157236.1 (uncharacterized protein LOC111023993 isoform X2 [Momordica charantia])

HSP 1 Score: 237.7 bits (605), Expect = 5.3e-59
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0

Query: 1   MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVK 60
           MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVK
Sbjct: 1   MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVK 60

Query: 61  PTVVEGNVMGLKLNMLDDSTTNLELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS 120
           PTVV GNVMGLKLNMLDDSTTN ELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS
Sbjct: 61  PTVVXGNVMGLKLNMLDDSTTNXELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS 119

BLAST of Moc11g27330 vs. NCBI nr
Match: TYK19759.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04
Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 2   NWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVKP 61
           NWKVVQ +Q +H+WD+PE+    +D+E++     ++V++     +  +E     R DV P
Sbjct: 119 NWKVVQVIQNKHIWDLPEV----DDVENEHINILEVVVSHQR--DDHIEDDIPCRIDVDP 178

Query: 62  TVVEGNVM-GLKLNMLDDSTTNLELSEDDDSL 93
           T+VE +VM  L  + +DD   +L  + DDD L
Sbjct: 179 TIVERSVMRHLTDDFIDDVDEHLSHARDDDKL 204

BLAST of Moc11g27330 vs. NCBI nr
Match: KAA0061623.1 (GDSL esterase/lipase [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-04
Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 2   NWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVKP 61
           NWKVVQ +Q +H+WD+PE+    +D+E++     ++V++     +  +E     R DV P
Sbjct: 119 NWKVVQVIQNKHIWDLPEV----DDVENEHINILEVVVSHQR--DDHIEDDIPCRIDVDP 178

Query: 62  TVVEGNVM-GLKLNMLDDSTTNLELSEDDDSL 93
           T+VE +VM  L  + +DD   +L  + DDD L
Sbjct: 179 TIVERSVMRHLTDDFIDDVDEHLSHARDDDKL 204

BLAST of Moc11g27330 vs. ExPASy TrEMBL
Match: A0A6J1DXD5 (uncharacterized protein LOC111023993 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023993 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0

Query: 1   MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVK 60
           MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVK
Sbjct: 1   MNWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVK 60

Query: 61  PTVVEGNVMGLKLNMLDDSTTNLELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS 120
           PTVV GNVMGLKLNMLDDSTTN ELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS
Sbjct: 61  PTVVXGNVMGLKLNMLDDSTTNXELSEDDDSLPASNSDSFDALNSHDTDGEQEGGIWSS 119

BLAST of Moc11g27330 vs. ExPASy TrEMBL
Match: A0A5D3D8I5 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3861G00140 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 2   NWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVKP 61
           NWKVVQ +Q +H+WD+PE+    +D+E++     ++V++     +  +E     R DV P
Sbjct: 119 NWKVVQVIQNKHIWDLPEV----DDVENEHINILEVVVSHQR--DDHIEDDIPCRIDVDP 178

Query: 62  TVVEGNVM-GLKLNMLDDSTTNLELSEDDDSL 93
           T+VE +VM  L  + +DD   +L  + DDD L
Sbjct: 179 TIVERSVMRHLTDDFIDDVDEHLSHARDDDKL 204

BLAST of Moc11g27330 vs. ExPASy TrEMBL
Match: A0A5A7V0F7 (GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3980G00070 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 33/92 (35.87%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 2   NWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVKP 61
           NWKVVQ +Q +H+WD+PE+    +D+E++     ++V++     +  +E     R DV P
Sbjct: 119 NWKVVQVIQNKHIWDLPEV----DDVENEHINILEVVVSHQR--DDHIEDDIPCRIDVDP 178

Query: 62  TVVEGNVM-GLKLNMLDDSTTNLELSEDDDSL 93
           T+VE +VM  L  + +DD   +L  + DDD L
Sbjct: 179 TIVERSVMRHLTDDFIDDVDEHLSHARDDDKL 204

BLAST of Moc11g27330 vs. ExPASy TrEMBL
Match: A0A5A7TCH8 (Acidic leucine-rich nuclear phosphoprotein 32 family member A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1441G00390 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.9e-04
Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 2   NWKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFINGSMEFGYLNRADVKP 61
           NWKVVQ VQ + +WD+PE+    +D+E++     ++V++    ++  ++   L R DV P
Sbjct: 118 NWKVVQIVQNKRIWDVPEV----DDVENEHLNILEIVVSHQ--VDEHIQDDTLYRTDVDP 177

Query: 62  TVVEGNVM-GLKLNMLDDSTTNLELSEDDDSL 93
           T+VE  V+  +  + +DD   +L  + DDD L
Sbjct: 178 TIVERLVVCYVSDDFIDDVDEHLSHASDDDKL 203

BLAST of Moc11g27330 vs. ExPASy TrEMBL
Match: A0A2P6RNK4 (DUF4216 domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0106121 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.9e-04
Identity = 32/117 (27.35%), Postives = 65/117 (55.56%), Query Frame = 0

Query: 3   WKVVQFVQPRHLWDIPEIENDEEDIEDQSSEPWDLVITRNMFING------------SME 62
           WKVVQ VQ RH+WD+PE+++++E++++++ +P  +V   +++                +E
Sbjct: 185 WKVVQKVQMRHVWDVPEVDDEDEEVDEENFDP--VVANNDVYQQDEFNEIQWSVQEEGLE 244

Query: 63  FGYLNRADVKPTVVEGNVMGLKLNMLDDSTTNLELSEDDDSLPASNSDSFDALNSHD 108
              L++ D++P V+  NV   +L  +DDS  N  + +D +       D+ + ++S D
Sbjct: 245 NPQLHQEDIEPEVIASNVESDEL--IDDSRLNDFICDDVEENDTDYDDNEEIISSDD 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157236.15.3e-5998.32uncharacterized protein LOC111023993 isoform X2 [Momordica charantia][more]
TYK19759.12.2e-0435.87GDSL esterase/lipase [Cucumis melo var. makuwa][more]
KAA0061623.12.2e-0435.87GDSL esterase/lipase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DXD52.6e-5998.32uncharacterized protein LOC111023993 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A5D3D8I51.1e-0435.87GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386... [more]
A0A5A7V0F71.1e-0435.87GDSL esterase/lipase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold398... [more]
A0A5A7TCH86.9e-0433.70Acidic leucine-rich nuclear phosphoprotein 32 family member A-like OS=Cucumis me... [more]
A0A2P6RNK46.9e-0427.35DUF4216 domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g01... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g27330.1Moc11g27330.1mRNA