Moc11g25770 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGGCGGCGGGACGGTAGATCTAGTTTGGGACGTGGCGCATCAAGCACATATGGTACGGGTGGCGGCCAACGGGGAGGGTGGCGGCGGTTGGGTGCGACGGTGACCGATATAATTTTGGTTCGTGGACGGTGGCGTGAAGGTGAGCGGCGCATGGATCTGCTTCGTGAGGTGAGCAGCAAGACAGGGTGGTGGCCTTAACGGTGAGAGGCGGGATGGCGGCTTGCGGATCTACTTCGTGAGGAAGACGATGGTTGTAGGGTGCATGAAGTTGCGTGAGACCAAAAGGTGGGAAGGGACTCCTAAAACCCTAACTTCTCTAACTCAAGTCAAAGGTGAAAAGTAAATTTTATATTTACTTAGTAATAATCTTATTTGTCCTCTTATTTTGGAATTTTAGAGTGGTAAATTTCAAAATCTACCCTAATACATTTTTAATAAATTTTTCTTAAATCAATTTTCAAATTCTGATTATCAATTTTAAATTAGATTTAAGTTAACTATTTAAATTTCATTCATTCGATTAGATAGAATCGATTCTCAAATGAAAGCCCGTTATTTTTGCCTAAAATTATACGTATATACTTAATTGGTTACAAGGTTATATTTGTCTACAAAATATTTTAGAATTTAACGGAAAAAATCAATTAGCCATTATTGCAATATTTCATAGGTTTGGACATTTTTTAAAACGCGTTATTAATTTTAGTCATTCCTGCAATTGCCCCGATTAAGATTAATCATTGATGGGTTTTAATAATAAATGTGTTTTAGTGATATTGGGCTTTAGTTACACTTTGTTTTATATGTAACCATTATTTTGTCATCTGTTGAAAGTTGTTAAGAGCCCAATAGTCTATATAAGAACGTTAACACCTCCTGTATTTTGTAATGGATTTCAATACAAAATAATCCATTATGTTACGATGGTATCAGAGCTCTCAAACGTCTAACGACGATTCAAGAAATATGACAGACTCTATAGAAGAGAATTCTGAAGTCACTACGAGCCAAGGATTCACGTTGATCAATCCGGGCAATAAAATCAATACAGTAAAGCTGACAGACAACAATTTCCTATTATGGAAGTTTCAGGTACTAGCAGCCTTAGAAGGTAATGGTTTAGAGAGCTATATTGATGAAAATAATCAAATTCCACAGCAGTAAATTGTCAGTACAGAAAACTCGATAATTACACAAAGGCCAAACCTAGCCTATACGCAGTGGAAAAGACAAGACAAACTGATAATCTCTTGGCTTCTGGGATCCATGTCAGAGGAGATTCTTGCAGACCTTCTTCACTACAAAACAACGCAAGAAATATGGAGCAATCTTCATCAAATCTTTACTACAAGAAATCTTGCCAAAGTAATGGAAATTTGAACTAGACTTCAGAATATCAAGAAAGGTAATTCTACTATTAAAGACTATGTTCGACAAGTTAAGAGCTTAGTTGATTCTTTACTAGCTACGGGACAACTAGTCACACCAGAGGATCACGTTCTTTACATTCTATCCGGATTAGGATTAGAATATGAGTCAACCATTTCAGTAATTACAACACAATCAGGTGAAGTTTCAGTACAAAAAGCTACTTCATTACTACTATCTCATGAAAGTAGAATGGATAAAGATGTGGCTCAAACAAATGTAAAGGATTCAACACTACCATCAGTAAATCTTGTTCAATAG ATGGTCGGGCGGCGGGACGGTAGATCTAGTTTGGGACGTGGCGCATCAAGCACATATGGTACGGGTGGCGGCCAACGGGGAGGGTGGCGGCGGTTGGGTGCGACGGTGACCGATATAATTTTGGTTCGTGGACGGTGGCGTGAAGGTGAGCGGCGCATGGATCTGCTTCGTGAGAGCTCTCAAACGTCTAACGACGATTCAAGAAATATGACAGACTCTATAGAAGAGAATTCTGAAGTCACTACGAGCCAAGGATTCACGTTGATCAATCCGGGCAATAAAATCAATACAGTAAAGCTGACAGACAACAATTTCCTATTATGGAAGTTTCAGAATATCAAGAAAGGTAATTCTACTATTAAAGACTATGTTCGACAAGTTAAGAGCTTAGTTGATTCTTTACTAGCTACGGGACAACTAGTCACACCAGAGGATCACGTTCTTTACATTCTATCCGGATTAGGATTAGAATATGAGTCAACCATTTCAGTAATTACAACACAATCAGGTGAAGTTTCAGTACAAAAAGCTACTTCATTACTACTATCTCATGAAAGTAGAATGGATAAAGATGTGGCTCAAACAAATGTAAAGGATTCAACACTACCATCAGTAAATCTTGTTCAATAG ATGGTCGGGCGGCGGGACGGTAGATCTAGTTTGGGACGTGGCGCATCAAGCACATATGGTACGGGTGGCGGCCAACGGGGAGGGTGGCGGCGGTTGGGTGCGACGGTGACCGATATAATTTTGGTTCGTGGACGGTGGCGTGAAGGTGAGCGGCGCATGGATCTGCTTCGTGAGAGCTCTCAAACGTCTAACGACGATTCAAGAAATATGACAGACTCTATAGAAGAGAATTCTGAAGTCACTACGAGCCAAGGATTCACGTTGATCAATCCGGGCAATAAAATCAATACAGTAAAGCTGACAGACAACAATTTCCTATTATGGAAGTTTCAGAATATCAAGAAAGGTAATTCTACTATTAAAGACTATGTTCGACAAGTTAAGAGCTTAGTTGATTCTTTACTAGCTACGGGACAACTAGTCACACCAGAGGATCACGTTCTTTACATTCTATCCGGATTAGGATTAGAATATGAGTCAACCATTTCAGTAATTACAACACAATCAGGTGAAGTTTCAGTACAAAAAGCTACTTCATTACTACTATCTCATGAAAGTAGAATGGATAAAGATGTGGCTCAAACAAATGTAAAGGATTCAACACTACCATCAGTAAATCTTGTTCAATAG MVGRRDGRSSLGRGASSTYGTGGGQRGGWRRLGATVTDIILVRGRWREGERRMDLLRESSQTSNDDSRNMTDSIEENSEVTTSQGFTLINPGNKINTVKLTDNNFLLWKFQNIKKGNSTIKDYVRQVKSLVDSLLATGQLVTPEDHVLYILSGLGLEYESTISVITTQSGEVSVQKATSLLLSHESRMDKDVAQTNVKDSTLPSVNLVQ Homology
BLAST of Moc11g25770 vs. NCBI nr
Match: XP_022158089.1 (uncharacterized protein LOC111024658 [Momordica charantia]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19 Identity = 54/111 (48.65%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Moc11g25770 vs. NCBI nr
Match: XP_022136882.1 (dr1-associated corepressor homolog isoform X1 [Momordica charantia]) HSP 1 Score: 101.3 bits (251), Expect = 1.0e-17 Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Moc11g25770 vs. NCBI nr
Match: XP_022136883.1 (dr1-associated corepressor homolog isoform X2 [Momordica charantia]) HSP 1 Score: 101.3 bits (251), Expect = 1.0e-17 Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Moc11g25770 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia]) HSP 1 Score: 86.3 bits (212), Expect = 3.5e-13 Identity = 44/99 (44.44%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Moc11g25770 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 1.9e-11 Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of Moc11g25770 vs. ExPASy TrEMBL
Match: A0A6J1DYD5 (uncharacterized protein LOC111024658 OS=Momordica charantia OX=3673 GN=LOC111024658 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 7.1e-20 Identity = 54/111 (48.65%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Moc11g25770 vs. ExPASy TrEMBL
Match: A0A6J1C8R2 (dr1-associated corepressor homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 5.1e-18 Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Moc11g25770 vs. ExPASy TrEMBL
Match: A0A6J1C6N9 (dr1-associated corepressor homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008464 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 5.1e-18 Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Moc11g25770 vs. ExPASy TrEMBL
Match: A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.7e-13 Identity = 44/99 (44.44%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Moc11g25770 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 9.2e-12 Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of Moc11g25770 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04 Identity = 24/77 (31.17%), Postives = 43/77 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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