Moc11g16290 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g16290
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon opus
Locationchr11: 12472288 .. 12474691 (-)
RNA-Seq ExpressionMoc11g16290
SyntenyMoc11g16290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAACAGCGGGTGCGAAGAGAGTTAATAGAAATGAATCGCAACAAGCAAAACTCACCTGAGGACGAAGTAGTAAGAATACCAGGGGAAGGAGTTGTTAATGGAGTACCTACCCTAAACGATGTTCTGCTGGCCGATGACACAAAGCAGAAAATTAGAGCATATGCAGCTCCAACGTTCTATGACTTCAACCCTGTCATTGTTGATCCAATCATCAAAGTAGGGAGATTTGAGCTGAAGCCTGAAATGTTTCAAATGTTGCAAACAGTGGGACCATTTTATGAACTGGCATCATAAGACCCACACAGACACTTAAGATATTTTATGCAAGTAGCTTATTCGTTTAAGGAAACTGGAGTTAGTAAGGAAGCGATGAGATTGAAGCTATTCCCTTACTCGTTGAGGGACTCTACTGAAGCATGGCTGGACTCCTTGCCCATCGAATCAATTACTTCATGAACGACTTAGCAGAGCAATTTTTGATACAGTATTTCCCACCTTCGAAGAATGCTAAACTTAGAAACAAGATTAACAATTTTCAGCAGTTGCCAGGAGAATCCTTAAGTGATTCTTGGAAAAGGTTCAAAGGGCTGTTGTAAAAATGCCCCCATAATGGAATACCCCGCTGCATTCAGATTAAGACTTATTACAATGGGCTAAACGAGGCCACACAGTTGGTAATTGATGCCTCAGCTAATAGAGCTTTGCTGTTAGGACTGTATGCAGAAGCTTTTGACATATTGGAAAGAATTTCAAGGAATAAGCATCAATGGTTAAAATCACGAGCTGCATCAACAACATCAAGTCCCATAGGGTTAGTAATAGAGGATGTAGTGGTGGACCTCAATTCCAAAATTTGACACTTGGTTGATATTGTCATGAAGAATGTCACTAGAAATGAGGTCGTAGGGCCTAAGGCGATGGTGGCAGCTGTACAGGCAGCTGTACAGAACAGCCTGTACCCATACTGTGAAAGAGAGCATCATTTTGAAAACTGTCTGGGTAATCTCACATCAATATATTACTTGGGCAATCAGCAACAAAATAGAAATAATGTGTATGGTATCACATACAACTCAAGTTGGAAGAACCACCCAAACTTCAGTTGGGGAGGGAACCAAGTAGGCAACAACGTCAGGTCAAGTAACACCCTAGGTATATTAAAAAACTACAGTATCCGCCAGGTTTTTTCAGACAAAATCAGCAGAATACACAAAAGCAACCAGAATCAATGAGATTAGAGGAGATGTTTAAAATCTACATGACTAAGAATGATGCCAACGTTCAAAGTCAAGCAACTCTCTTGCAGTGTCAGACAGCATCACTGCGAAACATGGAAGTCTAAATATGACAGTTGGCGACAGAACTGAAAAATGGACCAAAAAGTGTGCTGCCAAGTGATATAGAGCAACCTAAGAGAGACGGTAAAGATCAGTGCAAGGCGTTGACATTACTGAGTGGCAAAGCCTTACCACCAATACCGCAGCAGGAGAAAGATCATGAAGAAACCGTTGCAGAACCAGCGAAAGCACAAGCTCCAGAGACTGGTACAAACTTAGAAGTTGAAAAAAGAGACATAGTGGAACACAAACAATAGACATTGAGAAGGCTGAAACCTTAATGGATAGCCATGAGTCTGAAAAGCTCATGTTTAATGAAGTTGGACCATCCGTAACTATAAGAGCTAAAGACTCTAAAAAGTTAAATAAGTCTAAGGTTCCAGCACCAATAGCTGACTACGTCCCAGCAGTACCTTATCCTAAACGTTTACAGAAAAAGAATCAAGAGGGACAATTCAAAAGGTTTCTTGTGGTGCTTAAACATATACACATAAACATACCTCTCGTGGAAGCCTTGGAGCAGATGCCTACATATGTGAAATTCTTAAAGGATGTCCTCACTAAGAAGAGACGGTTAGGAGAATTTGAAACGGTCTGCTTAACAAAGGAGTGTAGCACAATTCTAACCAGCAAAATACCACAAAAATGAAAGATCCAGGAAGCTTTACAATCCCCGTATCAATTGGTGGTCATAAGATTGGACAAGCACTTTGCGATCTCGGAGCAAGCATCAAGTTAATGCCTTTTTTAGTATATCAGAAGCTAGGGATGGGAGCAGTTAAGCCAACTACGGTCAACCTACAGCTCGCTGATAGATCCATTGCTGCAGAAGGAAAAATGAGGATGTTTTGGTATAAGTGGGTAAATTTATATTCCTTGCTGACTTTATTGTTCTTGATTTTGATTCAGATGAGGAAGTACATATCATTATGGGAAGACCATTTCTGGTGACAAGAAAAGCTTTAGCAGATGTGCATAAAGGGGAAGTCACTATGAGGCTACAAGAACAAGAGATAAAATTTTCGGTGTACGAATCTATGAAATACCCCGCAAAAGCTTAG

mRNA sequence

ATGGCTGAACAGCGGGTGCGAAGAGAGTTAATAGAAATGAATCGCAACAAGCAAAACTCACCTGAGGACGAAGTAGTAAGAATACCAGGGGAAGGAGTTGTTAATGGAGTACCTACCCTAAACGATGTTCTGCTGGCCGATGACACAAAGCAGAAAATTAGAGCATATGCAGCTCCAACGTTCTATGACTTCAACCCTGTCATTGTTGATCCAATCATCAAAGTAGGGAGATTTGAGCTGAAGCCTGAAATGTTTCAAATGTTGCAAACAATTAAGACTTATTACAATGGGCTAAACGAGGCCACACAGTTGGTAATTGATGCCTCAGCTAATAGAGCTTTGCTGTTAGGACTGTATGCAGAAGCTTTTGACATATTGGAAAGAATTTCAAGGAATAAGCATCAATGGTTAAAATCACGAGCTGCATCAACAACATCAAGTCCCATAGGAAATGAGGTCGTAGGGCCTAAGGCGATGGTGGCAGCTGTACAGGCAGCTGTACAGAACAGCCTGTACCCATACTGTGAAAGAGAGCATCATTTTGAAAACTGTCTGGAACTGAAAAATGGACCAAAAAGTGTGCTGCCAAGTGATATAGAGCAACCTAAGAGAGACGGTAAAGATCAGTGCAAGGCGTTGACATTACTGAGTGGCAAAGCCTTACCACCAATACCGCAGCAGGAGAAAGATCATGAAGAAACCGTTGCAGAACCAGCGAAAGCACAAGCTCCAGAGACTGATGAGGAAGTACATATCATTATGGGAAGACCATTTCTGGTGACAAGAAAAGCTTTAGCAGATGTGCATAAAGGGGAAGTCACTATGAGGCTACAAGAACAAGAGATAAAATTTTCGGTGTACGAATCTATGAAATACCCCGCAAAAGCTTAG

Coding sequence (CDS)

ATGGCTGAACAGCGGGTGCGAAGAGAGTTAATAGAAATGAATCGCAACAAGCAAAACTCACCTGAGGACGAAGTAGTAAGAATACCAGGGGAAGGAGTTGTTAATGGAGTACCTACCCTAAACGATGTTCTGCTGGCCGATGACACAAAGCAGAAAATTAGAGCATATGCAGCTCCAACGTTCTATGACTTCAACCCTGTCATTGTTGATCCAATCATCAAAGTAGGGAGATTTGAGCTGAAGCCTGAAATGTTTCAAATGTTGCAAACAATTAAGACTTATTACAATGGGCTAAACGAGGCCACACAGTTGGTAATTGATGCCTCAGCTAATAGAGCTTTGCTGTTAGGACTGTATGCAGAAGCTTTTGACATATTGGAAAGAATTTCAAGGAATAAGCATCAATGGTTAAAATCACGAGCTGCATCAACAACATCAAGTCCCATAGGAAATGAGGTCGTAGGGCCTAAGGCGATGGTGGCAGCTGTACAGGCAGCTGTACAGAACAGCCTGTACCCATACTGTGAAAGAGAGCATCATTTTGAAAACTGTCTGGAACTGAAAAATGGACCAAAAAGTGTGCTGCCAAGTGATATAGAGCAACCTAAGAGAGACGGTAAAGATCAGTGCAAGGCGTTGACATTACTGAGTGGCAAAGCCTTACCACCAATACCGCAGCAGGAGAAAGATCATGAAGAAACCGTTGCAGAACCAGCGAAAGCACAAGCTCCAGAGACTGATGAGGAAGTACATATCATTATGGGAAGACCATTTCTGGTGACAAGAAAAGCTTTAGCAGATGTGCATAAAGGGGAAGTCACTATGAGGCTACAAGAACAAGAGATAAAATTTTCGGTGTACGAATCTATGAAATACCCCGCAAAAGCTTAG

Protein sequence

MAEQRVRRELIEMNRNKQNSPEDEVVRIPGEGVVNGVPTLNDVLLADDTKQKIRAYAAPTFYDFNPVIVDPIIKVGRFELKPEMFQMLQTIKTYYNGLNEATQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSPIGNEVVGPKAMVAAVQAAVQNSLYPYCEREHHFENCLELKNGPKSVLPSDIEQPKRDGKDQCKALTLLSGKALPPIPQQEKDHEETVAEPAKAQAPETDEEVHIIMGRPFLVTRKALADVHKGEVTMRLQEQEIKFSVYESMKYPAKA
Homology
BLAST of Moc11g16290 vs. NCBI nr
Match: XP_022158768.1 (uncharacterized protein LOC111025234 [Momordica charantia])

HSP 1 Score: 152.1 bits (383), Expect = 7.3e-33
Identity = 107/233 (45.92%), Postives = 130/233 (55.79%), Query Frame = 0

Query: 16  NKQNSPEDEVVRIPGEGVVNG---VPTLNDVLLADDTKQKIRAYAAPTFYDFNPVIVDPI 75
           N    P+ +V R+ G+ V  G    P LN +LL DD +Q+IRAYAAP F+DFNPVIVDPI
Sbjct: 6   NPPIQPKLKVERVQGD-VAGGHALTPPLNAILLGDDIEQEIRAYAAPAFFDFNPVIVDPI 65

Query: 76  IKVGRFELKPEMFQMLQTI-----KTYYNGL---------NEATQLVIDASANRALLLGL 135
           I+  RFELKP MFQMLQ       +  Y  L         ++  + VIDAS+N+ALLL  
Sbjct: 66  IEADRFELKPAMFQMLQIFHGLASEDPYRHLQYFMQVANSSKVEEFVIDASSNKALLLKH 125

Query: 136 YAEAFDILERISRNKHQWLKSRA-ASTTSSPIGNEVV--------------GPKAM---- 195
           YAEAFDILE ISRNKHQ  KSRA +STTS  + N+ V              G K++    
Sbjct: 126 YAEAFDILEEISRNKHQRSKSRAVSSTTSKGLANDDVVANLNSKISKLADIGMKSISHSD 185

Query: 196 VAAVQAAV---QNSLYPYCEREHHFENCLELKNGPKSVLPSDIEQPKRDGKDQ 210
             A +A V   QN   PYC+REHHFE+C      P SV      QP      Q
Sbjct: 186 AGASKAKVNSMQNVSCPYCKREHHFEDC---PGNPPSVFYLGNPQPNMGNNQQ 234

BLAST of Moc11g16290 vs. NCBI nr
Match: XP_022153147.1 (probable serine/threonine-protein kinase PBL11 [Momordica charantia])

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-26
Identity = 81/171 (47.37%), Postives = 100/171 (58.48%), Query Frame = 0

Query: 8   RELIEMNRNK-QNSPEDEVVRIPG---EGVV-NGVPTLNDVLLADDTKQKIRAYAAPTFY 67
           R + E  R + + +P D++ R+P    E VV    PTLN +LLADD ++ IRAYAA   +
Sbjct: 21  RRIREQRRQQVETNPMDQLPRLPNPMVEVVVPAAAPTLNTILLADDGERAIRAYAALVLH 80

Query: 68  DFNPVIVDPIIKVGRFELKPEMFQMLQT---------------------IKTYYNGLNEA 127
            F+PVI  P I+  RFELKP MFQMLQT                     IK +YNGL+EA
Sbjct: 81  SFHPVIAGPEIEAERFELKPVMFQMLQTVGKFFGNPCEDSHLHLRYFLEIKNFYNGLSEA 140

Query: 128 TQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSPIGNE 153
           T+LV+DASANRALL   Y EA DILERIS N + W  SRA  +      NE
Sbjct: 141 TRLVVDASANRALLSKSYVEAIDILERISANNYHWSDSRADRSNHGVNDNE 191

BLAST of Moc11g16290 vs. NCBI nr
Match: XP_022151321.1 (uncharacterized protein LOC111019284 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-20
Identity = 99/266 (37.22%), Postives = 128/266 (48.12%), Query Frame = 0

Query: 94  YYNGLNEATQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSP--IGN 153
           YYNGLNEATQLVI ASAN ALL   YAEAFD  + IS NKHQW KSR AS  +S     +
Sbjct: 2   YYNGLNEATQLVIGASANGALLSKPYAEAFDTPKIISSNKHQWSKSRVASAKTSKRLADD 61

Query: 154 EVVGP--KAMVAAVQAAVQNSLYPYCE-----------REHHFE---NCLELKNGPKSVL 213
           +VV      +   V   ++N      E           R    E      ELK+GP+++L
Sbjct: 62  DVVADLNSKISMLVDIMMKNITQHDAEVSKATSQAASLRNMEVEIGKLATELKSGPRTIL 121

Query: 214 PSDI-EQPKRDGK-----------------DQCKALTLLS---------GKALP------ 273
            S I E+ K  G                  D   ++ L+          G+A P      
Sbjct: 122 TSKIPEKMKNSGSFIIPVAIGGQKIRQTLYDLGASINLMPMSIYKKLGIGEARPTMVTLQ 181

Query: 274 ----PIPQQEKDHEETVAEPAKAQAP--------ETDEEVHIIMGRPFLVTRKALADVHK 297
                I   E   ++ + E  K   P        + ++EV II GRPFL T +AL DVHK
Sbjct: 182 LASRSITHPEGQIQDVLVEVDKFTFPTDFIILDYDANKEVPIINGRPFLATGRALVDVHK 241

BLAST of Moc11g16290 vs. NCBI nr
Match: XP_030509265.1 (uncharacterized protein LOC115723943 [Cannabis sativa])

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-16
Identity = 83/311 (26.69%), Postives = 131/311 (42.12%), Query Frame = 0

Query: 31  EGVVNGVPTLNDVLLADDTKQKIRAYAAPTFYDFNPVIVDPIIKVGRFELKPEMFQMLQ- 90
           EG+   +  +N ++LADD  + IR YAAP F + NP +        +FE++  +F+ L+ 
Sbjct: 8   EGIAQQI--VNPIILADDRARAIREYAAPMFNELNPAL------NAKFEVRSCLFKELED 67

Query: 91  --------------------------TIKTYYNGLNEATQLVIDASANRALLLGLYAEAF 150
                                      ++T+YNGLN A+++V+DASAN A+L   Y EAF
Sbjct: 68  ESTSDAWERFKELLRKCPHHGIPHCIQMETFYNGLNAASRMVLDASANGAILSKSYNEAF 127

Query: 151 DILERISRNKHQWLKSRAASTTSSPIGNEVVGPKAMVAAVQAAVQN-------------- 210
           +ILE I+ N +QW  +RA ++       EV    A+ A + +   N              
Sbjct: 128 EILETIASNNYQWSNTRAPTSRKVAGVLEVDAITALTAQMASMTNNHPNLSWGGQGASSS 187

Query: 211 -------SLYP--YCEREHHFENCL----------------------------------- 251
                    YP  + ++  H ++                                     
Sbjct: 188 TAPAQGRQAYPPGFSQQPRHSQHAQNAQPSSLESLMRDYMAKNDAVIQSQAASLRNLELQ 247

BLAST of Moc11g16290 vs. NCBI nr
Match: XP_022159060.1 (uncharacterized protein LOC111025500 [Momordica charantia])

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-14
Identity = 76/232 (32.76%), Postives = 89/232 (38.36%), Query Frame = 0

Query: 91  IKTYYNGLNEATQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSPIG 150
           IKTYYNGL++AT+LVIDASAN ALL   YAEAF+ILERIS N   W   RA     S   
Sbjct: 52  IKTYYNGLDDATRLVIDASANGALLAKPYAEAFNILERISSNNQSWSDPRAIHGKGSKGF 111

Query: 151 NE--------------------------VVGPKAMVAAVQAAVQNSLYPYCEREHHFENC 210
           NE                           VG  A  A V + +Q     +C  E+ + NC
Sbjct: 112 NESESFTALNLKIENLTDLVMRSMTHQSTVGASAGKANV-SHIQGISCSFCVGEYRYNNC 171

Query: 211 ------------------------------------------------------------ 223
                                                                       
Sbjct: 172 PGNPESVHYLGNAQNNENNPYSIRTTWAGGTILTLVRVEIRKETMLKYMENNDTTVQSQA 231

BLAST of Moc11g16290 vs. ExPASy TrEMBL
Match: A0A6J1DX14 (uncharacterized protein LOC111025234 OS=Momordica charantia OX=3673 GN=LOC111025234 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33
Identity = 107/233 (45.92%), Postives = 130/233 (55.79%), Query Frame = 0

Query: 16  NKQNSPEDEVVRIPGEGVVNG---VPTLNDVLLADDTKQKIRAYAAPTFYDFNPVIVDPI 75
           N    P+ +V R+ G+ V  G    P LN +LL DD +Q+IRAYAAP F+DFNPVIVDPI
Sbjct: 6   NPPIQPKLKVERVQGD-VAGGHALTPPLNAILLGDDIEQEIRAYAAPAFFDFNPVIVDPI 65

Query: 76  IKVGRFELKPEMFQMLQTI-----KTYYNGL---------NEATQLVIDASANRALLLGL 135
           I+  RFELKP MFQMLQ       +  Y  L         ++  + VIDAS+N+ALLL  
Sbjct: 66  IEADRFELKPAMFQMLQIFHGLASEDPYRHLQYFMQVANSSKVEEFVIDASSNKALLLKH 125

Query: 136 YAEAFDILERISRNKHQWLKSRA-ASTTSSPIGNEVV--------------GPKAM---- 195
           YAEAFDILE ISRNKHQ  KSRA +STTS  + N+ V              G K++    
Sbjct: 126 YAEAFDILEEISRNKHQRSKSRAVSSTTSKGLANDDVVANLNSKISKLADIGMKSISHSD 185

Query: 196 VAAVQAAV---QNSLYPYCEREHHFENCLELKNGPKSVLPSDIEQPKRDGKDQ 210
             A +A V   QN   PYC+REHHFE+C      P SV      QP      Q
Sbjct: 186 AGASKAKVNSMQNVSCPYCKREHHFEDC---PGNPPSVFYLGNPQPNMGNNQQ 234

BLAST of Moc11g16290 vs. ExPASy TrEMBL
Match: A0A6J1DI54 (probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN=LOC111020716 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-26
Identity = 81/171 (47.37%), Postives = 100/171 (58.48%), Query Frame = 0

Query: 8   RELIEMNRNK-QNSPEDEVVRIPG---EGVV-NGVPTLNDVLLADDTKQKIRAYAAPTFY 67
           R + E  R + + +P D++ R+P    E VV    PTLN +LLADD ++ IRAYAA   +
Sbjct: 21  RRIREQRRQQVETNPMDQLPRLPNPMVEVVVPAAAPTLNTILLADDGERAIRAYAALVLH 80

Query: 68  DFNPVIVDPIIKVGRFELKPEMFQMLQT---------------------IKTYYNGLNEA 127
            F+PVI  P I+  RFELKP MFQMLQT                     IK +YNGL+EA
Sbjct: 81  SFHPVIAGPEIEAERFELKPVMFQMLQTVGKFFGNPCEDSHLHLRYFLEIKNFYNGLSEA 140

Query: 128 TQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSPIGNE 153
           T+LV+DASANRALL   Y EA DILERIS N + W  SRA  +      NE
Sbjct: 141 TRLVVDASANRALLSKSYVEAIDILERISANNYHWSDSRADRSNHGVNDNE 191

BLAST of Moc11g16290 vs. ExPASy TrEMBL
Match: A0A6J1DEA2 (uncharacterized protein LOC111019284 OS=Momordica charantia OX=3673 GN=LOC111019284 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.9e-21
Identity = 99/266 (37.22%), Postives = 128/266 (48.12%), Query Frame = 0

Query: 94  YYNGLNEATQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSP--IGN 153
           YYNGLNEATQLVI ASAN ALL   YAEAFD  + IS NKHQW KSR AS  +S     +
Sbjct: 2   YYNGLNEATQLVIGASANGALLSKPYAEAFDTPKIISSNKHQWSKSRVASAKTSKRLADD 61

Query: 154 EVVGP--KAMVAAVQAAVQNSLYPYCE-----------REHHFE---NCLELKNGPKSVL 213
           +VV      +   V   ++N      E           R    E      ELK+GP+++L
Sbjct: 62  DVVADLNSKISMLVDIMMKNITQHDAEVSKATSQAASLRNMEVEIGKLATELKSGPRTIL 121

Query: 214 PSDI-EQPKRDGK-----------------DQCKALTLLS---------GKALP------ 273
            S I E+ K  G                  D   ++ L+          G+A P      
Sbjct: 122 TSKIPEKMKNSGSFIIPVAIGGQKIRQTLYDLGASINLMPMSIYKKLGIGEARPTMVTLQ 181

Query: 274 ----PIPQQEKDHEETVAEPAKAQAP--------ETDEEVHIIMGRPFLVTRKALADVHK 297
                I   E   ++ + E  K   P        + ++EV II GRPFL T +AL DVHK
Sbjct: 182 LASRSITHPEGQIQDVLVEVDKFTFPTDFIILDYDANKEVPIINGRPFLATGRALVDVHK 241

BLAST of Moc11g16290 vs. ExPASy TrEMBL
Match: A0A6J1DXK5 (uncharacterized protein LOC111025500 OS=Momordica charantia OX=3673 GN=LOC111025500 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-15
Identity = 76/232 (32.76%), Postives = 89/232 (38.36%), Query Frame = 0

Query: 91  IKTYYNGLNEATQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAASTTSSPIG 150
           IKTYYNGL++AT+LVIDASAN ALL   YAEAF+ILERIS N   W   RA     S   
Sbjct: 52  IKTYYNGLDDATRLVIDASANGALLAKPYAEAFNILERISSNNQSWSDPRAIHGKGSKGF 111

Query: 151 NE--------------------------VVGPKAMVAAVQAAVQNSLYPYCEREHHFENC 210
           NE                           VG  A  A V + +Q     +C  E+ + NC
Sbjct: 112 NESESFTALNLKIENLTDLVMRSMTHQSTVGASAGKANV-SHIQGISCSFCVGEYRYNNC 171

Query: 211 ------------------------------------------------------------ 223
                                                                       
Sbjct: 172 PGNPESVHYLGNAQNNENNPYSIRTTWAGGTILTLVRVEIRKETMLKYMENNDTTVQSQA 231

BLAST of Moc11g16290 vs. ExPASy TrEMBL
Match: A0A5B6WTE7 (Retrovirus-related Pol polyprotein from transposon opus OS=Gossypium australe OX=47621 GN=EPI10_006278 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-12
Identity = 78/258 (30.23%), Postives = 119/258 (46.12%), Query Frame = 0

Query: 94  YYNGLNEATQLVIDASANRALLLGLYAEAFDILERISRNKHQWLKSRAAS---------- 153
           +YNGLN  T+LV+DAS N  LL   Y EA++I+E+I+ N +QWL +R  S          
Sbjct: 2   FYNGLNAHTRLVVDASVNGPLLSKSYNEAYEIIEKIASNNYQWLTNRTTSGRRVVRVHDV 61

Query: 154 --------------------TTS--SPIGNEVVGP-KAMVAAVQAAVQNSLYPYCEREHH 213
                               TT+  +PI  ++    KA +    A +Q+        E+ 
Sbjct: 62  ESLTLLSAHVSSISSMLKWFTTNGFNPIAAQLPSQFKAYMVKNDALIQSQAVTLKNLENQ 121

Query: 214 F-ENCLELKNGPKSVLPSDIEQPKRDG-------KDQCKALTLLSGKALPPIPQQE---- 273
             +  +EL N  +  LPSD E P+  G       K   K L +  G+  P I + +    
Sbjct: 122 MGQVAMELSNRLQGALPSDTENPRNLGVIINLMTKSIFKLLGI--GEVRPMIVKLQLVDR 181

Query: 274 ---------KD---HEETVAEPAKAQAP--ETDEEVHIIMGRPFLVTRKALADVHKGEVT 293
                    KD     +T   PA   A   E D+E+ II+ RPFL T + L D+ KGE+ 
Sbjct: 182 SLAYPEGKIKDVLVRVDTFIFPADTIALDFEADKEMSIILERPFLATGRMLIDMKKGELG 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158768.17.3e-3345.92uncharacterized protein LOC111025234 [Momordica charantia][more]
XP_022153147.18.7e-2647.37probable serine/threonine-protein kinase PBL11 [Momordica charantia][more]
XP_022151321.11.4e-2037.22uncharacterized protein LOC111019284 [Momordica charantia][more]
XP_030509265.11.3e-1626.69uncharacterized protein LOC115723943 [Cannabis sativa][more]
XP_022159060.11.2e-1432.76uncharacterized protein LOC111025500 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX143.5e-3345.92uncharacterized protein LOC111025234 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DI544.2e-2647.37probable serine/threonine-protein kinase PBL11 OS=Momordica charantia OX=3673 GN... [more]
A0A6J1DEA26.9e-2137.22uncharacterized protein LOC111019284 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DXK55.7e-1532.76uncharacterized protein LOC111025500 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5B6WTE71.2e-1230.23Retrovirus-related Pol polyprotein from transposon opus OS=Gossypium australe OX... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g16290.1Moc11g16290.1mRNA