Moc11g16250 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g16250
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF1985 domain-containing protein
Location	chr11: 12441315 .. 12443149 (-)
RNA-Seq Expression	Moc11g16250
Synteny	Moc11g16250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGTATTCGAACAAACCTAGGTGAAAAACATAGTGATAGGTTTAGGCAAACCTGTTTTGGCCATTTATTGGACTTCTCCATTAGCAAAACGTCATCTCAACTTCTCCTTCACCTAATCCAACGCCTTTGTAAACCAAGAAAGTCATCAGAATTAAACTTCTATATTGGGGGGAAGATATTAAAGTTTGGAGTCAAGGAATTTGCCATAGTGACAGAGTTGAACTGTGGTCCATTACCCCAGATAGACATGGATAGGGTGAAGGGGGAAGGACACATAAGAATGTTTATTTTGAAGGGAGAAGTCTGTGACAAGGAAACACCTAAACCTTGCTTTCAAGGTTAACAAGAATGCACATGAAGATGATATGGTGAAGATGACCTTGCTCTATTGTTTAGAGAGTTTTCTTTTGCCATACCAAAACTCCGTACATGTAGATATGAACCACATTCTAATGGTAGACGATGAAGAAATATTCAATAACTACCCATGGGGAGGGTAGCATTTGACTTTCTTATTGACTACATGAAAAAGGCGCCAGATAGCCGAGGGCTAACATGCGTAGGGATGGGTGGATTTATATCTGCGCCGATAGTGTGGACGTATGAGGTGATACCTTCACTTAGTACCCCACGGAGAATTAGGTATGGCACTCTACAAATGGTCAATTGGGAAGCTGAACTACAGCCAGAGTGAAATGAATTGGCTGCAACGATTTTTGGCTCGCCAACGGTAATGTTCTAGTTACTCTTTTTTAGAATAAATTGTACTGTCAACCTGATTAAATTACTAAATACCTCACTTTTTTGTGTAGCTGGAAGTGGTGCCATTGGTGCCAACCGAAGAGGAACTGACCATGGCATATATGGTGCCATTTCTCGAAGATTAAGATGGAACAACAATGGGGGCGGTCCAAGCCCCAGAATTTGGGAGTGCAATAGGTATAAACGAGCGTTTGACTACAATTGAAAATAAGTAGGATGAAATTGTAAATACCCAGAAGGAATTTTCAGGGAAGCTTGATGGCATTATGACAAACTTAAATATGATTCTTGAACAATTGAAAACAAGTGCTGGGCTGGAGAATGAAAGACTCGATAGGTTTATGATGAGAGGTGATGTGAACGTGGGAAGTGCATTCGAAACTATCTATAAGGTAAATGTAATTAGCTACTCTGTATGTTTATTACAGCCTCATCTTGATATATGAAGGTTGTAATGTTGCAGAGGACATCATCATTTACAAATGAGCTTGAGACTCTAGAAGCTCAAAAAGATAAGAAAAAGAATGACCATCCAATTGATGATCACCACCAAGAAAAAGTCTCAGGTATGCAGAGGAAAGATGATGAGGAGGATCCTACAGGTGGATAAAGACAACCACACCTTGCAGTTATGCAGGGTATCCGAGCGAGTGCCACCCCGAGAACTGATGCAGGAAAGGTTTCTGAAAAACAAGTCAATGAGGTCATAAGTTGTATTGATGAGGATAAAATTATTGAGAAGATGAAGATGACCCAACTAGGAGCGGCAGCGGTGGGAAAGGTGATCTTTTGTTTTATTTAGATGTATAGACTATATAAAATGAAACGTGTACTCATGTAATCCTACCGTATGCAGAATACATCCAAACTTAGACACACTAAGCTTCCAAAGACACCGGTTTGTAGAGGAGTAAATCATTTGCAACGGGTGAGTAATCCTATAACTGTATGAAATTATTATTTAAAACTGGTTTGACATTTTAGAAATGATACGCTATGGAGATAAAAATATAGGATCAAGTACTTCCCGATGAGGCTCGACTTTCAGAAGGGAGGTTGGCACTTTAA

mRNA sequence

ATGAAGAGTATTCGAACAAACCTAGGTGAAAAACATAGTGATAGGTTTAGGCAAACCTGTTTTGGCCATTTATTGGACTTCTCCATTAGCAAAACGTCATCTCAACTTCTCCTTCACCTAATCCAACGCCTTTGTAAACCAAGAAAGTCATCAGAATTAAACTTCTATATTGGGGGGAAGATATTAAAGTTTGGAGTCAAGGAATTTGCCATAGTGACAGAGTTGAACTGTGGTCCATTACCCCAGATAGACATGGATAGGGTGAAGGGGGAAGGACACATAAGAATGTTTATTTTGAAGGGAGAAGTCTGTGACAAGGAAACACCTAAACCTTGCTTTCAAGCTGGAAGTGGTGCCATTGGTGCCAACCGAAGAGGAACTGACCATGGCATATATGGTGCCATTTCTCGAAGATTAAGATGGAACAACAATGGGGGCGGTCCAAGCCCCAGAATTTGGGAGTGCAATAGTGCTGGGCTGGAGAATGAAAGACTCGATAGGTTTATGATGAGAGGTGATGTGAACGTGGGAAGTGCATTCGAAACTATCTATAAGAGGACATCATCATTTACAAATGAGCTTGAGACTCTAGAAGCTCAAAAAGATAAGAAAAAGAATGACCATCCAATTGATGATCACCACCAAGAAAAAGTCTCAGGTATGCAGAGGAAAGATGATGAGGAGGATCCTACAGGAAAGGTTTCTGAAAAACAAGTCAATGAGGTCATAAGTTGTATTGATGAGGATAAAATTATTGAGAAGATGAAGATGACCCAACTAGGAGCGGCAGCGGTGGGAAAGAATACATCCAAACTTAGACACACTAAGCTTCCAAAGACACCGGTTTGTAGAGGAGTAAATCATTTGCAACGGGATCAAGTACTTCCCGATGAGGCTCGACTTTCAGAAGGGAGGTTGGCACTTTAA

Coding sequence (CDS)

ATGAAGAGTATTCGAACAAACCTAGGTGAAAAACATAGTGATAGGTTTAGGCAAACCTGTTTTGGCCATTTATTGGACTTCTCCATTAGCAAAACGTCATCTCAACTTCTCCTTCACCTAATCCAACGCCTTTGTAAACCAAGAAAGTCATCAGAATTAAACTTCTATATTGGGGGGAAGATATTAAAGTTTGGAGTCAAGGAATTTGCCATAGTGACAGAGTTGAACTGTGGTCCATTACCCCAGATAGACATGGATAGGGTGAAGGGGGAAGGACACATAAGAATGTTTATTTTGAAGGGAGAAGTCTGTGACAAGGAAACACCTAAACCTTGCTTTCAAGCTGGAAGTGGTGCCATTGGTGCCAACCGAAGAGGAACTGACCATGGCATATATGGTGCCATTTCTCGAAGATTAAGATGGAACAACAATGGGGGCGGTCCAAGCCCCAGAATTTGGGAGTGCAATAGTGCTGGGCTGGAGAATGAAAGACTCGATAGGTTTATGATGAGAGGTGATGTGAACGTGGGAAGTGCATTCGAAACTATCTATAAGAGGACATCATCATTTACAAATGAGCTTGAGACTCTAGAAGCTCAAAAAGATAAGAAAAAGAATGACCATCCAATTGATGATCACCACCAAGAAAAAGTCTCAGGTATGCAGAGGAAAGATGATGAGGAGGATCCTACAGGAAAGGTTTCTGAAAAACAAGTCAATGAGGTCATAAGTTGTATTGATGAGGATAAAATTATTGAGAAGATGAAGATGACCCAACTAGGAGCGGCAGCGGTGGGAAAGAATACATCCAAACTTAGACACACTAAGCTTCCAAAGACACCGGTTTGTAGAGGAGTAAATCATTTGCAACGGGATCAAGTACTTCCCGATGAGGCTCGACTTTCAGAAGGGAGGTTGGCACTTTAA

Protein sequence

MKSIRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILKFGVKEFAIVTELNCGPLPQIDMDRVKGEGHIRMFILKGEVCDKETPKPCFQAGSGAIGANRRGTDHGIYGAISRRLRWNNNGGGPSPRIWECNSAGLENERLDRFMMRGDVNVGSAFETIYKRTSSFTNELETLEAQKDKKKNDHPIDDHHQEKVSGMQRKDDEEDPTGKVSEKQVNEVISCIDEDKIIEKMKMTQLGAAAVGKNTSKLRHTKLPKTPVCRGVNHLQRDQVLPDEARLSEGRLAL

Homology

[Close]

BLAST of Moc11g16250 vs. NCBI nr
Match: KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-20
Identity = 46/95 (48.42%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1   MKSIRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGK 60
           ++ I+ NLG++  +RFR+  FGH L+ SI+  SSQLLLHLIQR+CKP+ +S+L F IGG+
Sbjct: 189 IEKIKENLGDRLINRFREGIFGHFLNLSITNQSSQLLLHLIQRMCKPKSTSQLQFLIGGR 248

Query: 61  ILKFGVKEFAIVTELNCGPLPQIDMDRVKGEGHIR 96
           +L+FG++EFA++T L C  +P I+ + + G G ++
Sbjct: 249 VLRFGLREFALITGLRCHEIPDINHEDINGGGRLK 283

[Close]

BLAST of Moc11g16250 vs. NCBI nr
Match: XP_031743197.1 (uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-16
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  ISK SSQL  HLI+R C  +  +EL F + G+I K
Sbjct: 723 IKNTLNERQLKKFKKSCFGNFLDLKISKFSSQLFYHLIRRQCCSKNRNELWFNLEGRIHK 782

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 783 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 817

[Close]

BLAST of Moc11g16250 vs. NCBI nr
Match: XP_031743208.1 (uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-16
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  ISK SSQL  HLI+R C  +  +EL F + G+I K
Sbjct: 677 IKNTLNERQLKKFKKSCFGNFLDLKISKFSSQLFYHLIRRQCCSKNRNELWFNLEGRIHK 736

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 737 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 771

[Close]

BLAST of Moc11g16250 vs. NCBI nr
Match: XP_031743205.1 (uncharacterized protein LOC101221625 isoform X17 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-16
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  ISK SSQL  HLI+R C  +  +EL F + G+I K
Sbjct: 700 IKNTLNERQLKKFKKSCFGNFLDLKISKFSSQLFYHLIRRQCCSKNRNELWFNLEGRIHK 759

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 760 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 794

[Close]

BLAST of Moc11g16250 vs. NCBI nr
Match: KGN48800.2 (hypothetical protein Csa_003918 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-16
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  ISK SSQL  HLI+R C  +  +EL F + G+I K
Sbjct: 626 IKNTLNERQLKKFKKSCFGNFLDLKISKFSSQLFYHLIRRQCCSKNRNELWFNLEGRIHK 685

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 686 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 720

[Close]

BLAST of Moc11g16250 vs. ExPASy TrEMBL
Match: A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-20
Identity = 46/95 (48.42%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1   MKSIRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGK 60
           ++ I+ NLG++  +RFR+  FGH L+ SI+  SSQLLLHLIQR+CKP+ +S+L F IGG+
Sbjct: 189 IEKIKENLGDRLINRFREGIFGHFLNLSITNQSSQLLLHLIQRMCKPKSTSQLQFLIGGR 248

Query: 61  ILKFGVKEFAIVTELNCGPLPQIDMDRVKGEGHIR 96
           +L+FG++EFA++T L C  +P I+ + + G G ++
Sbjct: 249 VLRFGLREFALITGLRCHEIPDINHEDINGGGRLK 283

[Close]

BLAST of Moc11g16250 vs. ExPASy TrEMBL
Match: A0A6J1BX50 (uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005524 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-16
Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+  D  R++CFG+ LDF I+K SSQL  HLI+R C  +  +EL F + G++ K
Sbjct: 269 IKNTLNERQLDMLRRSCFGNFLDFKITKFSSQLFYHLIRRQCSSKNPNELWFNLEGRVHK 328

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRVK 90
           FG+K+FA++T +NCG LP IDM +++
Sbjct: 329 FGIKDFALITGMNCGELPTIDMSKIQ 354

[Close]

BLAST of Moc11g16250 vs. ExPASy TrEMBL
Match: A0A0A0KI50 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-16
Identity = 46/95 (48.42%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  ISK SSQL  HLI+R C  +  +EL F + G+I K
Sbjct: 600 IKNTLNERQLKKFKKSCFGNFLDLKISKFSSQLFYHLIRRQCCSKNRNELWFNLEGRIHK 659

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 660 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 694

[Close]

BLAST of Moc11g16250 vs. ExPASy TrEMBL
Match: A0A5D3CNI7 (TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005170 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-16
Identity = 45/95 (47.37%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  +SK SSQL  HLI+R C  +   EL F + G+I K
Sbjct: 655 IKNTLNERQLKKFKKSCFGYFLDLKVSKFSSQLFYHLIRRQCCSKNRHELWFNLEGRIHK 714

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 715 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 749

[Close]

BLAST of Moc11g16250 vs. ExPASy TrEMBL
Match: A0A1S3B0L9 (uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103484737 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.1e-16
Identity = 45/95 (47.37%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 4   IRTNLGEKHSDRFRQTCFGHLLDFSISKTSSQLLLHLIQRLCKPRKSSELNFYIGGKILK 63
           I+  L E+   +F+++CFG+ LD  +SK SSQL  HLI+R C  +   EL F + G+I K
Sbjct: 563 IKNTLNERQLKKFKKSCFGYFLDLKVSKFSSQLFYHLIRRQCCSKNRHELWFNLEGRIHK 622

Query: 64  FGVKEFAIVTELNCGPLPQIDMDRV-KGEGHIRMF 98
           FG+K+FA++T LNCG LP IDM ++ KG+ + R F
Sbjct: 623 FGMKDFALITGLNCGELPAIDMSKIQKGKFNKRYF 657

[Close]

BLAST of Moc11g16250 vs. TAIR 10
Match: AT1G31150.1 (Domain of unknown function (DUF1985) )

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 9   GEKHSDRFRQTCFGHLLDFSISKTS-SQLLLH-LIQRLCKPRKSSELNFYIGGKILKFGV 68
           G +  +R + + FG L +F +++ S S  L+H L+ R    +K  EL F  GG  ++F +
Sbjct: 45  GSEEWERIKSSQFGKLFEFPVARCSHSGKLIHGLLSRQVVTKKKHELWFVFGGHPIRFSI 104

Query: 69  KEFAIVTELNCGPLPQID 85
           +EF IVT L CG LP  D
Sbjct: 105 REFHIVTGLRCGKLPTED 122

The following BLAST results are available for this feature:

BLAST of Moc11g16250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047596.1	3.3e-20	48.42	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
XP_031743197.1	3.8e-16	48.42	uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]	[more]
XP_031743208.1	3.8e-16	48.42	uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus]	[more]
XP_031743205.1	3.8e-16	48.42	uncharacterized protein LOC101221625 isoform X17 [Cucumis sativus]	[more]
KGN48800.2	3.8e-16	48.42	hypothetical protein Csa_003918 [Cucumis sativus]	[more]

BLAST of Moc11g16250 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g16250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U047	1.6e-20	48.42	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00...	[more]
A0A6J1BX50	1.8e-16	47.67	uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A0A0KI50	1.8e-16	48.42	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 ...	[more]
A0A5D3CNI7	3.1e-16	47.37	TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B0L9	3.1e-16	47.37	uncharacterized protein LOC103484737 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Moc11g16250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31150.1	1.5e-07	38.46	Domain of unknown function (DUF1985)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g16250.1	Moc11g16250.1	mRNA