Moc11g15750 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g15750
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionExostosin family protein
Locationchr11: 11987802 .. 11990005 (-)
RNA-Seq ExpressionMoc11g15750
SyntenyMoc11g15750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAATCAATTTCTATTGGAGTTCAGGTTCCACAACAGGATGAAGCAGTACGAGAGTTTGACCAAAGATTTGGCCATGGCTTCCACTGTTTATGTACTGTTCTCTGCCAGGTCTCGATTATTAACTAATGTAATTAGTTTGTTTCTGTTATTTATTATTTATTTAGTTTTGTGTTCTATTAACAAGTTGTTAAGAGTATATCTCTATAAATACTCTTTAATTGTATTAGCAAAAGTAAGGGGGAAATAATACAATACTTTCACAATTTGTGAAAGATTACATGGTATCAAATTCTTTCTGACACGCGTCTTTTTTGATCCTTTCCACGCTTTCGCCTTCTCTAAGATTTCTCAGTCCATGCATTCCCCTTTTCTTTCTCTGCCATGAATCCCTCCGGAAACTTAGACAAAGACATTCACTCTCCAATTTTTCTTCTATCAAATATACGTAATCTGATTTCAATTCGTCTTGATGCTACGAATTTTATTCTATGGAAGTTTCAACTTACAGCGATTTTTAAGGCACACAAGCTTTTCGGCTTTATCGATGGTTCTTCATTGGCGCCATCTGAATTTCTTTCTTCTTCACGCCAAACAGCTACTGGAAGTACTACTTTTACCACTGCATCACGCACTGTCAAACCCTTCTTTGAAGATTGGATTGCAAAAGATCAAGCGTGTTGGGTTTAGATCCCAGAGTTCCTGAGTTTGTTATATGTAAAACATTTTATTTATTATTAATAAAAGATATTTTTTATTGCTTTGAATTTTTTGTATTTCAATAAACTAAGATCTAAAGTTATTTAATGTAACTGGAACATCTTGATATACAGTTAATGTACCTGGTATAAACTATATATATTATTGATATACAAGTGGATAATGTTCCAATAATAACCTAAATGATCATCTAACTCGATCTTAATCCTGAGTGAGTTACGAACTCCTGTGTACGAGGGTAGGGATGGAACTGAGTAGGGAGCTGAGGACGTAACTAAAGTAGATGAGTGTTCCCTTAAAGATTGACTCTGGGACTTGAACAAGGAGTCCCACTCTTTTACTGGCCCGAGAGGGACTTCCAGTTATTGGTCGACCCAACTTCCAATTATTGGTCGGACCATCACTGGGTTGTTCATTAGAGGATTAATAGTACTTAAGGTACAAGAAGTAATCTAGAGGTAAAATGGTAATTTGACCTAACTGAGGTTACGAGCACTCGCGAATAATCGACTTACTGTTAATGATTATATCTATTAGGGGTGTAAACGGCTCGGTTCGGTCGCTTTGGTGGTAGAACCGCAACCGAACCGAAAATTTGTAGAAGAAAATATCAAAAACCGATCCGACCGCTAAATTCATCTAAAACCGTGCCGAACCGGGCAAAAAACCGATGGGATCGTCTGTTCGGCGTGGCGAGTAAACCGCGCGCGTGCGCAACAGCTTGAGGCTCGGGTTCAGGTCAGGCGCGGGTGGGTTTGCACGTGTGTGGCCTTCGGCCTGTGGTACTGGACATGCATTTTTTGGTTGAGCCGGCAGATCTGGCCCTCTGGGCGTTGCCTGATTTCATTTTACTTTTTTTTTTCTTTTCGATTTTTGCTTTCCAATTTCCATTTCGTTTTTTTTTCCCTCAATGCTAAAAATTTAAATTATCCTTTACAATAATAATGTTGAAGTTACACAAAATCTTCCTTTACTAATAATAATATTGGATGATGAAGGAACTAGAAAGTAGAAGGTAAGTAAATTAGAAAAGGAAAATAGAAAAAGAAGATCGGAATCAAATTTGAAAGTTCATCATTCATATCTTTTAACTTTTAAATTATTATTTTATTTAGTATTTCATAAATAGAAAATAATCAAAATCAGATTCTTAATTTTGAATCTTTGATTTTGCTTAATTTTCGAATAGGATGAATGGACGGGACTTCAAAACCTTTAAATTTATTATCTTATTTAATATTTTATAAATAGAAAATAAATCAGAATCGGATTCTTAATTTTGAATCTTTGATTGTTTATTTTTCTAGGAGGAGGAATGGAAAAATTAAAGTTTTGATTTTTAAGTCCAACTGTGGAAGGGAAGAGACGAAGACGAAGACTGACGGAAGCAAGGCGCAACAGGAAGCCACCACGGGTCCACGTGTAGCGGAAACTGGAAGGGAAGCAGACAGACACCTCATCTCTGACCTGCAATTCGAATAA

mRNA sequence

ATGAGGAATCAATTTCTATTGGAGTTCAGGTTCCACAACAGGATGAAGCAGTACGAGAGTTTGACCAAAGATTTGGCCATGGCTTCCACTGTTTATGTACTGTTCTCTGCCAGGAGGAGGAATGGAAAAATTAAAGTTTTGATTTTTAAGTCCAACTGTGGAAGGGAAGAGACGAAGACGAAGACTGACGGAAGCAAGGCGCAACAGGAAGCCACCACGGGTCCACGTGTAGCGGAAACTGGAAGGGAAGCAGACAGACACCTCATCTCTGACCTGCAATTCGAATAA

Coding sequence (CDS)

ATGAGGAATCAATTTCTATTGGAGTTCAGGTTCCACAACAGGATGAAGCAGTACGAGAGTTTGACCAAAGATTTGGCCATGGCTTCCACTGTTTATGTACTGTTCTCTGCCAGGAGGAGGAATGGAAAAATTAAAGTTTTGATTTTTAAGTCCAACTGTGGAAGGGAAGAGACGAAGACGAAGACTGACGGAAGCAAGGCGCAACAGGAAGCCACCACGGGTCCACGTGTAGCGGAAACTGGAAGGGAAGCAGACAGACACCTCATCTCTGACCTGCAATTCGAATAA

Protein sequence

MRNQFLLEFRFHNRMKQYESLTKDLAMASTVYVLFSARRRNGKIKVLIFKSNCGREETKTKTDGSKAQQEATTGPRVAETGREADRHLISDLQFE
Homology
[Close]
BLAST of Moc11g15750 vs. ExPASy Swiss-Prot
Match: O81072 (Probable xyloglucan galactosyltransferase GT11 OS=Arabidopsis thaliana OX=3702 GN=GT11 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-04
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 3   NQFLLEFRFHNRMKQYESLTKDLAMASTVYV 34
           NQF LE  FHNRMKQY+ LTKD ++AS VYV
Sbjct: 346 NQFTLEVIFHNRMKQYKCLTKDSSLASAVYV 376

[Close]
BLAST of Moc11g15750 vs. TAIR 10
Match: AT2G29040.1 (Exostosin family protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-05
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 3   NQFLLEFRFHNRMKQYESLTKDLAMASTVYV 34
           NQF LE  FHNRMKQY+ LTKD ++AS VYV
Sbjct: 346 NQFTLEVIFHNRMKQYKCLTKDSSLASAVYV 376

[Close]
BLAST of Moc11g15750 vs. TAIR 10
Match: AT2G31990.1 (Exostosin family protein )

HSP 1 Score: 41.6 bits (96), Expect = 4.2e-04
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0 

Query: 3   NQFLLEFRFHNRMKQYESLTKDLAMASTVYVLFSA--------RRRN 42
           NQF+LE  FH +MK YE LT++ ++AS +YV + A        RRRN
Sbjct: 134 NQFMLEVIFHEKMKSYECLTRNSSLASAIYVPYYAGLDFRRHLRRRN 180

The following BLAST results are available for this feature:
BLAST of Moc11g15750 vs.
Match NameE-valueIdentityDescription
BLAST of Moc11g15750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O810721.8e-0470.97Probable xyloglucan galactosyltransferase GT11 OS=Arabidopsis thaliana OX=3702 G... [more]
BLAST of Moc11g15750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Moc11g15750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G29040.11.3e-0570.97Exostosin family protein [more]
AT2G31990.14.2e-0446.81Exostosin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g15750.1Moc11g15750.1mRNA