Moc11g15650 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g15650
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S18
Locationchr11: 11873189 .. 11877940 (-)
RNA-Seq ExpressionMoc11g15650
SyntenyMoc11g15650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAACTGCAGTTTCTTCTTTGTTGTTTCCGCTTGTTCTTCTTCTGCGTTGTTCTTGAATATACCAAATTATTCGTCAGGGTTTTGTATTTTCCCCAAAATGGTTGATTGTGTTTGTTTCTCTGGTTCTTTATCTAGTCGCTGGTAGCGAACGAGGAATTTCAGCACATTCTGCGTGTGCTGAACACGAACGTGGATGGGAAGCAGAAGATTATGTTTGCTCTTACTTCAATCAAAGGTATTGGAAGGCGTTTCGCTAATATCGTTTGCAAGAAGGCCGATGTCGACATGAACAAGAGGTATTTTATGCCCTTCTTTTCCATTTGTCCTGTATGTACTTCCATAGAAAGATTCGAGAATTATTGATGTTAAAAAGGACGCGTTCTAGTTCTACTTTGGTTGATTCTTATGTCGGTAATGATGTGGGCTGCTAGTCACGTTGGTCTGTTCCTTTTTCCGCATTAAAATGGATGATATTTTGGCTCTGTGTTGTTGGTTGTTACTAATTATATGTGCAGATAAGTAAGCTTCAAGTTTTACATAAAAAACTCAAGTTCTGAGATATTTGGGAAACAATAAGTTTAGTTTATTAGGGGTATGGCTATTGATTAAATCTTTGAAAGATATGGGATCTTTGAAGGAGTTGATTGTTGTTGGAACAATCATACTGCCGACATACGCATGATGATATTCTTCTGAATGATGAGGTCAGGCACTACATGACAAGATATGAGATGATGTATGACAAAACATAGCATCATGTAAATAGGGATATGTGATAGGTTAATTGTTATATGATTTAGGATTTTTAAAGAAGTTGGTTTCTTGGTTCATGTTTGCAGCTGGAATCTGAAAATGTGATGTAGGATTATGTTGGAAAACAAGAAAAAGCCAAACAAAATGTGGAGTAGAGGACTTCTAATCCACGAGCCTTCAATTAGAGTAATATTTACCAGGCAAGGATTTCAAAATATTAGAAAACTTTTCTGACAACCAGGTCTAGCTAAGGAAAAAAGAAAGACTACAATTCTCATTTGAGTTATTTGAGAATAAGTACGAACTGCAAGGAGATTCTTGGTTACTGGAATTATCTGCTGCATCTTCTTTTTTCCCATTGGATATGGCTTGACGCCATATGTTCCTCGTGCTTATTTGGTTTGATGTATACAGATGGCTGCAATTTTATTTTTTCCCTTTGATTATTTAAACTGACAATTCCTTCTGTGCTAAAATTAACTTATTTTTCTTCGGTATAAGTGATGAACAGCTGCTCAAGTGTAGTTGGTATTTGGAATATCTCGTCAGAAGTAAGGCAGGAGCAATTAACTTATATTTGTAGCTTGCTTCAGTAGTTACAATAGTTCATTGTTGGTGTTTTTATTAGTGTTTTACTTGATTTAGATGGAATAAAATACTTGTATTCCAATAATATATCTCAAGTGAGAAATACACAACCTTCTTATATAGGAGAAAGGCACAATACATAAAAGGAATGTAAATAAGAATTTAATATTTACAACTAATTACAACTAATATCCACAAATAAACCAACAGTTTTAAACTCAGTAAATGTTTATATTTATTCTTTTGTTGTATGTTTAATGACCATAAATGAATTTTCTTTTGAATTATTGTTCCCTTTATAACCCTAGAGGATGTTACAATTTAGAAGAAAGGAAAAACTGAAGGTGGATTATCAAATTTACACCTTCGTTCTCATTTGTTGTTGTTACTGCCAGGGCTGGTGAATTGACTGCTGCTGAGTTGGACAATCTCATGGTGGTTGTTGCCAATCCACGTCAATTTAAAATTCCTGACTGGTTTTTGAATCGGCAAAAGGACTACAAGGACGGGAAATATTCTCAAGTGGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAACGGTTGAAGAAGATCAGGTAACTTCTGTTTTTGATATCATATCAACATGCACAGTTTTTTGGTTAAAGTGTTTCTACAGTCGTCCGTCCATTTGGAACTTATGTTAGTTTTCTGTTTCTGAGTATAAAACTTATGTTAGTTTTATGTTTCTGAGTATGAAACTTGTTTGACACGGTAAATTTTAGAATCAGTTTTCAAAGCCGAAAAATAAAGAATATTTTGCTGTTTTATGTGTTCTATTATTGATATGTAATAATTAATTATTTTAAGACACCCATCTCCGATAAAAAGCCATAAGTTCGAATCCCTACCTCCACGTGTTGTACTACAAAAAATTAATTATTTTTAAGTATAGTTTGATCTAATTGTGTTGTATTGTTCTAAATATATGTAGGACTGAAATAAATGAAATCGCAAGAAAATAACATATCTTTCCAAACTGTTTTTTAGATATAGTTTTTAAATGCACCAAAGCAGTCCTTTAATCTGCTGGTGTCATATTCAACATGCATGGTCCTGTAGTTGAAATACTTTTATAATGTCTGAACTGTAATGCTTCCACTGATAAGGTATTGCCTTATAATTTTCTGCAACTAATCTATTATCAACTTGAATCCGTATTCAAGTGGTCCACCCCACTAATCTTCGGGGGTGAATAACGAACATTGATACATTGAATGCAGGAATCACCGAGGTCTGAGGCATTACTGGGGTCTCCGAGTCCGTGGTCAGCACACCAAGACCACTGGTCGCCGAGGGAAAACCGTTGGTGTCTCCAAGAAGCGTTAAGCTTTTCCAGGTTTTTATAATCGAGTTGAGCATGTGGTTGGGCAAATCGGGTTCTTTGGCCTTTTAGTTGAACGTTTTGAGTTGGAACTTTGTTTTTGGAATTTTTGCTTGGGATGATATTTTTGGTTAACTTATTACCCCCCTTCTTTTATACTGTCTTTTTGGGCCAGAAAATATTGATAGTGGCAGATGGCAAAAGCTTATGGATCTTGTTTATTGGTCATTTTAGTGTGAAGATTTTTATTTATAGAATTATTCTCATTTGGTGCAATCATGTTGTTATCATCAATTTGCTGACGAGAAAACATTGAAAACATTTTTGGACATTAGTTAATTAAATTTGTAAACTTGAGGGGTAATATTCATATAATAATTTGTATACTGTTTATATGTTCGATTTTGAGAGTAATGAGGATATTAGGTTGATGTCCTATTGATATTGTTTCATAGAGCAACACGAGAGAGGTTGCTAATTCTTGAAACGGGTTTTTTTGATAATGCAACTGTCTTATTTTCAGTTTTTGAGAAGCATCACTGCTCTTTGGGGTTGTTTTTTAAAACCTTTTGCTCACCCCTATCTAGACAACATCCACAGAGTGTCTCTAGGATTTCTTTCAAACAACTCTCTATTTATAGCCCTCCATGTACACCACCAAGGATTTTTGCTGTAAGCAGTTCTTATTTGTCTCCGAATTCATATATGATATGGTGAATCGTAGTGCTACAACATTCCAGTTATCAAGCACATTTAGCTTCCACAGCACAATGATGAATGTTCCATCATTTGTCAATGCATTTGCACATGATAGAATCCATTAAGACACCAACAAAATATATCAGTTTATCTAGCGGAGAATCCAGGAATTTTATTCAGATGGTACAATACACAAATATTTAATAAAATAATCGAACGATTGTTAATAGGTTGATAAATGAACTAATTGAATAACGTTACAATTGTCCTCTATGACTTTTCATATTTTGAAATCGATTTATTATCTAACATATCAAATAAATATTTCTCAATATATGCGATGAGACTATCATTTGGATATACCTTATCTCTTATCTCTATTTGTCATGACTATTTTTACTGTAAGATCACTTCACCAAACTCAGTATTCGAGTGCACATCAATAATATAATTTTTAAGTTGATCATCAAGCACTCAGTACTTGTTGCAGTAAAATGGTTACGCAATTCTTAAAACTGCAAGTCAATGCATGTATAAAAAACTTCAACGCAATAATGATGCATATTTGTAATTCGTTGAGATTTTTTGTCTTCGTCGCCCTCGAAAAAAAAACATATCATCCATCTTAAGAATTTGAATATCATGTGATGCGATCATAATTGACCTAATGCTCCAAGATGCCACATACACCAACCATGAAGAGAGACTTGAAGAAAGACCCACCAAACGAAGGAAACTTCATCGGACCCATCAACAAATAAGAGGAAGCATGAAAGGGAAGAGAAGCCAAGCGAGTGGCCTCCCATCAAGGACAAGCCCATCGAGAGGCCACCCACACGCACGTACAGACGAACGCCACCGTGTGCGGATGCCCCTACTGCGCACGCCATCATGCCGTGCAAACCTCCCAGCGTACCCCCTACAGCGCACGTCCCTGCCCTACTAACCTCACAAGATCGAAGATGTGTTAGTGCAAGTGGACAAGTTAATTTTCCCAGCTGACTTCATCATCCTCGATTATGAAGCAGACAACGAGATCCCAATAATTTTAGGGACGCCTTTTCTATCCACTGGTAGAGTGCTAATAGATGTGCATAATGGGGAGCTTACCATGAGAGTGAACAATCAACATGTTACATTTTCTGTTTTTAATTCTGTTAAATTCTTTGTTGATATAGAAGAATGTTCTCTCTTAAGACTTGCAGATGACTTGCTGAGTAAGAAAATTCAAAAGGAGACCTTGTTGGATCACTTGGAGAAAGAACTTACCATAGCCTACGAACATGTAGGGGACACTGTCGATGATGGAGCATCTCAGCCCACGGGCGACTCCAATGATGAAGAAGAAGAAGATTGA

mRNA sequence

ATGTCGCTGGTAGCGAACGAGGAATTTCAGCACATTCTGCGTGTGCTGAACACGAACGTGGATGGGAAGCAGAAGATTATGTTTGCTCTTACTTCAATCAAAGGTATTGGAAGGCGTTTCGCTAATATCGTTTGCAAGAAGGCCGATGTCGACATGAACAAGAGGGCTGGTGAATTGACTGCTGCTGAGTTGGACAATCTCATGGTGGTTGTTGCCAATCCACGTCAATTTAAAATTCCTGACTGGTTTTTGAATCGGCAAAAGGACTACAAGGACGGGAAATATTCTCAAGTGGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAACGGTTGAAGAAGATCAGGAATCACCGAGGTCTGAGGCATTACTGGGGTCTCCGAGTCCGTGGTCAGCACACCAAGACCACTGGTCGCCGAGGGAAAACCGTTGGTGTCTCCAAGAAGCCTGACTTCATCATCCTCGATTATGAAGCAGACAACGAGATCCCAATAATTTTAGGGACGCCTTTTCTATCCACTGGTAGAGTGCTAATAGATGTGCATAATGGGGAGCTTACCATGAGAGTGAACAATCAACATGTTACATTTTCTGTTTTTAATTCTGTTAAATTCTTTGTTGATATAGAAGAATGTTCTCTCTTAAGACTTGCAGATGACTTGCTGAGTAAGAAAATTCAAAAGGAGACCTTGTTGGATCACTTGGAGAAAGAACTTACCATAGCCTACGAACATGTAGGGGACACTGTCGATGATGGAGCATCTCAGCCCACGGGCGACTCCAATGATGAAGAAGAAGAAGATTGA

Coding sequence (CDS)

ATGTCGCTGGTAGCGAACGAGGAATTTCAGCACATTCTGCGTGTGCTGAACACGAACGTGGATGGGAAGCAGAAGATTATGTTTGCTCTTACTTCAATCAAAGGTATTGGAAGGCGTTTCGCTAATATCGTTTGCAAGAAGGCCGATGTCGACATGAACAAGAGGGCTGGTGAATTGACTGCTGCTGAGTTGGACAATCTCATGGTGGTTGTTGCCAATCCACGTCAATTTAAAATTCCTGACTGGTTTTTGAATCGGCAAAAGGACTACAAGGACGGGAAATATTCTCAAGTGGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAACGGTTGAAGAAGATCAGGAATCACCGAGGTCTGAGGCATTACTGGGGTCTCCGAGTCCGTGGTCAGCACACCAAGACCACTGGTCGCCGAGGGAAAACCGTTGGTGTCTCCAAGAAGCCTGACTTCATCATCCTCGATTATGAAGCAGACAACGAGATCCCAATAATTTTAGGGACGCCTTTTCTATCCACTGGTAGAGTGCTAATAGATGTGCATAATGGGGAGCTTACCATGAGAGTGAACAATCAACATGTTACATTTTCTGTTTTTAATTCTGTTAAATTCTTTGTTGATATAGAAGAATGTTCTCTCTTAAGACTTGCAGATGACTTGCTGAGTAAGAAAATTCAAAAGGAGACCTTGTTGGATCACTTGGAGAAAGAACTTACCATAGCCTACGAACATGTAGGGGACACTGTCGATGATGGAGCATCTCAGCCCACGGGCGACTCCAATGATGAAGAAGAAGAAGATTGA

Protein sequence

MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKPDFIILDYEADNEIPIILGTPFLSTGRVLIDVHNGELTMRVNNQHVTFSVFNSVKFFVDIEECSLLRLADDLLSKKIQKETLLDHLEKELTIAYEHVGDTVDDGASQPTGDSNDEEEED
Homology
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BLAST of Moc11g15650 vs. NCBI nr
Match: XP_022133825.1 (40S ribosomal protein S18 [Momordica charantia] >XP_022143681.1 40S ribosomal protein S18 [Momordica charantia])

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-78
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

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BLAST of Moc11g15650 vs. NCBI nr
Match: XP_012073942.1 (40S ribosomal protein S18 [Jatropha curcas] >KDP36554.1 hypothetical protein JCGZ_08321 [Jatropha curcas] >GAV72947.1 Ribosomal_S13 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 303.9 bits (777), Expect = 1.4e-78
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

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BLAST of Moc11g15650 vs. NCBI nr
Match: XP_004139687.1 (40S ribosomal protein S18 [Cucumis sativus] >XP_004140957.2 40S ribosomal protein S18 [Cucumis sativus] >XP_008456747.1 PREDICTED: 40S ribosomal protein S18 [Cucumis melo] >XP_008461916.1 PREDICTED: 40S ribosomal protein S18 [Cucumis melo] >XP_038884290.1 40S ribosomal protein S18 [Benincasa hispida] >XP_038896640.1 40S ribosomal protein S18 [Benincasa hispida] >KGN44457.1 hypothetical protein Csa_016630 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 2.3e-78
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

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BLAST of Moc11g15650 vs. NCBI nr
Match: KAA0059528.1 (40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK14112.1 40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 2.3e-78
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 23  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 82

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 83  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 142

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 143 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 173

[Close]
BLAST of Moc11g15650 vs. NCBI nr
Match: KAA0046827.1 (40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK04510.1 40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 2.3e-78
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 28  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 87

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 88  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 147

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 148 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 178

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BLAST of Moc11g15650 vs. ExPASy Swiss-Prot
Match: P34788 (40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.3e-79
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy Swiss-Prot
Match: Q8ISP0 (40S ribosomal protein S18 OS=Branchiostoma belcheri OX=7741 GN=RPS18 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-66
Identity = 118/151 (78.15%), Postives = 141/151 (93.38%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLV  E+FQHILRV+NTN+DG++KIMFALTSIKG+GRR++NIVCKKAD+D++KRAGEL+
Sbjct: 1   MSLVIPEKFQHILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
             E++ L+ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N+LD KLR+DLERLKKIR H
Sbjct: 61  DEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRG+TVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGRTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy Swiss-Prot
Match: Q8IT98 (40S ribosomal protein S18 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-65
Identity = 115/151 (76.16%), Postives = 141/151 (93.38%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           M+L+  E+FQHILRV+NTN+DGK+KIMFA+T+IKG+GRR+AN+VCKKADVD+ KRAGEL+
Sbjct: 1   MALIIPEKFQHILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
             E++ ++ +++NPRQ+KIP+WFLNRQKD KDGKYSQV+SNALD KLR+DLERLKKIR H
Sbjct: 61  EDEIERVITIMSNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRG+TVGV+KK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGRTVGVAKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy Swiss-Prot
Match: Q8JGS9 (40S ribosomal protein S18 OS=Danio rerio OX=7955 GN=rps18 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.9e-64
Identity = 113/151 (74.83%), Postives = 138/151 (91.39%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLV  E+FQHILRVLNTN+DG++KI FA+T+IKG+GRR+A++V +KAD+D+NKRAGELT
Sbjct: 1   MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
             E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR H
Sbjct: 61  EDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRH+WGLRVRGQHTKTTGRRG+TVGVSKK
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy Swiss-Prot
Match: Q90YQ5 (40S ribosomal protein S18 OS=Ictalurus punctatus OX=7998 GN=rps18 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.8e-63
Identity = 112/151 (74.17%), Postives = 138/151 (91.39%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLV  E+FQHILRVLNTN+DG++KI FA+T+IKG+GRR+A++V +KAD+D++KRAGELT
Sbjct: 1   MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
             E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR H
Sbjct: 61  EDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRH+WGLRVRGQHTKTTGRRG+TVGVSKK
Sbjct: 121 RGLRHFWGLRVRGQHTKTTGRRGRTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy TrEMBL
Match: A0A6J1BWC2 (40S ribosomal protein S18 OS=Momordica charantia OX=3673 GN=LOC111006290 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 5.1e-79
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy TrEMBL
Match: A0A067KXH7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08321 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.6e-79
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy TrEMBL
Match: A0A1Q3BYA9 (Ribosomal_S13 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_16435 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.6e-79
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy TrEMBL
Match: A0A0A0K7Z7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055370 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.1e-78
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. ExPASy TrEMBL
Match: A0A1S3CH47 (40S ribosomal protein S18 OS=Cucumis melo OX=3656 GN=LOC103500403 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.1e-78
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. TAIR 10
Match: AT1G22780.1 (Ribosomal protein S13/S18 family )

HSP 1 Score: 297.7 bits (761), Expect = 9.2e-81
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. TAIR 10
Match: AT1G34030.1 (Ribosomal protein S13/S18 family )

HSP 1 Score: 297.7 bits (761), Expect = 9.2e-81
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

[Close]
BLAST of Moc11g15650 vs. TAIR 10
Match: AT4G09800.1 (S18 ribosomal protein )

HSP 1 Score: 297.7 bits (761), Expect = 9.2e-81
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 152
           RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKK 151

The following BLAST results are available for this feature:
BLAST of Moc11g15650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022133825.11.1e-78100.0040S ribosomal protein S18 [Momordica charantia] >XP_022143681.1 40S ribosomal pr... [more]
XP_012073942.11.4e-7899.3440S ribosomal protein S18 [Jatropha curcas] >KDP36554.1 hypothetical protein JCG... [more]
XP_004139687.12.3e-7899.3440S ribosomal protein S18 [Cucumis sativus] >XP_004140957.2 40S ribosomal protei... [more]
KAA0059528.12.3e-7899.3440S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK14112.1 40S ... [more]
KAA0046827.12.3e-7899.3440S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK04510.1 40S ... [more]
BLAST of Moc11g15650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P347881.3e-7996.6940S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1[more]
Q8ISP01.6e-6678.1540S ribosomal protein S18 OS=Branchiostoma belcheri OX=7741 GN=RPS18 PE=2 SV=1[more]
Q8IT981.8e-6576.1640S ribosomal protein S18 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1[more]
Q8JGS99.9e-6474.8340S ribosomal protein S18 OS=Danio rerio OX=7955 GN=rps18 PE=2 SV=1[more]
Q90YQ53.8e-6374.1740S ribosomal protein S18 OS=Ictalurus punctatus OX=7998 GN=rps18 PE=2 SV=1[more]
BLAST of Moc11g15650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BWC25.1e-79100.0040S ribosomal protein S18 OS=Momordica charantia OX=3673 GN=LOC111006290 PE=3 SV... [more]
A0A067KXH76.6e-7999.34Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_08321 PE=3 SV=1[more]
A0A1Q3BYA96.6e-7999.34Ribosomal_S13 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CF... [more]
A0A0A0K7Z71.1e-7899.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055370 PE=3 SV=1[more]
A0A1S3CH471.1e-7899.3440S ribosomal protein S18 OS=Cucumis melo OX=3656 GN=LOC103500403 PE=3 SV=1[more]
BLAST of Moc11g15650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22780.19.2e-8196.69Ribosomal protein S13/S18 family [more]
AT1G34030.19.2e-8196.69Ribosomal protein S13/S18 family [more]
AT4G09800.19.2e-8196.69S18 ribosomal protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 220..240
NoneNo IPR availableGENE3D1.10.8.50coord: 1..80
e-value: 3.3E-35
score: 122.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..270
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..151
NoneNo IPR availablePANTHERPTHR10871:SF340S RIBOSOMAL PROTEIN S18-RELATEDcoord: 1..151
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 14..142
e-value: 2.3E-56
score: 189.7
IPR001892Ribosomal protein S13HAMAPMF_01315Ribosomal_S13_S18coord: 12..152
score: 22.555313
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 15..145
score: 34.840778
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.1030s ribosomal protein s13, domain 2coord: 92..142
e-value: 4.1E-28
score: 98.9
IPR018269Ribosomal protein S13, conserved sitePROSITEPS00646RIBOSOMAL_S13_1coord: 121..134
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 13..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g15650.1Moc11g15650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000028 regulation of photoperiodism, flowering
biological_process GO:0006412 translation
cellular_component GO:0005829 cytosol
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding