Moc11g15540 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g15540
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 11720481 .. 11720915 (-)
RNA-Seq Expression	Moc11g15540
Synteny	Moc11g15540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCTACAAACAGAAATCATTTCCCTTCGTGAAAAAGTCATTGTGTTGGAGGAGAAAGAAGTACAGTTTGCTCAGTATGCTCAAGAAAATCAAAGATTAAGGGAAACTGTTCAGGCGCTTTCAAGCCAGCTCGACAAAACCCAGAATAATGTTGATTGGTTAATGCATAATTATGCCCATATCAAGGAACAATACAACCAAGTGGGGTATGAATTAGACCATGTGAGGCGCGATAACACATTGTTGCGCCATAATTTAGAACATGTACTAACCCAAGTCAGACAGGCAGCCCGTAGGGCAGATGGTTTAGTTGAAGAGGCACGAGCTCTCACGTCTGCCATTGCCCCAACACAGTCGAATGGCAAAAGCACACTCAACTTCTTGAGCAAACTTCGGCGAGATCTAGAGCATTGGGGACAGTTTTATTGA

mRNA sequence

ATGTCTTCTCTACAAACAGAAATCATTTCCCTTCGTGAAAAAGTCATTGTGTTGGAGGAGAAAGAAGTACAGTTTGCTCAGTATGCTCAAGAAAATCAAAGATTAAGGGAAACTGTTCAGGCGCTTTCAAGCCAGCTCGACAAAACCCAGAATAATGTTGATTGGTTAATGCATAATTATGCCCATATCAAGGAACAATACAACCAAGTGGGGTATGAATTAGACCATGTGAGGCGCGATAACACATTGTTGCGCCATAATTTAGAACATGTACTAACCCAAGTCAGACAGGCAGCCCGTAGGGCAGATGGTTTAGTTGAAGAGGCACGAGCTCTCACGTCTGCCATTGCCCCAACACAGTCGAATGGCAAAAGCACACTCAACTTCTTGAGCAAACTTCGGCGAGATCTAGAGCATTGGGGACAGTTTTATTGA

Coding sequence (CDS)

ATGTCTTCTCTACAAACAGAAATCATTTCCCTTCGTGAAAAAGTCATTGTGTTGGAGGAGAAAGAAGTACAGTTTGCTCAGTATGCTCAAGAAAATCAAAGATTAAGGGAAACTGTTCAGGCGCTTTCAAGCCAGCTCGACAAAACCCAGAATAATGTTGATTGGTTAATGCATAATTATGCCCATATCAAGGAACAATACAACCAAGTGGGGTATGAATTAGACCATGTGAGGCGCGATAACACATTGTTGCGCCATAATTTAGAACATGTACTAACCCAAGTCAGACAGGCAGCCCGTAGGGCAGATGGTTTAGTTGAAGAGGCACGAGCTCTCACGTCTGCCATTGCCCCAACACAGTCGAATGGCAAAAGCACACTCAACTTCTTGAGCAAACTTCGGCGAGATCTAGAGCATTGGGGACAGTTTTATTGA

Protein sequence

MSSLQTEIISLREKVIVLEEKEVQFAQYAQENQRLRETVQALSSQLDKTQNNVDWLMHNYAHIKEQYNQVGYELDHVRRDNTLLRHNLEHVLTQVRQAARRADGLVEEARALTSAIAPTQSNGKSTLNFLSKLRRDLEHWGQFY

Homology

The following BLAST results are available for this feature:

BLAST of Moc11g15540 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g15540 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g15540 vs.


Match Name	E-value	Identity	Description

BLAST of Moc11g15540 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..52
None	No IPR available	GENE3D	1.10.287.1490		coord: 1..140 e-value: 6.4E-6 score: 27.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g15540.1	Moc11g15540.1	mRNA