Moc11g15310 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g15310
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Gag/pol protein
Location	chr11: 11553949 .. 11559172 (-)
RNA-Seq Expression	Moc11g15310
Synteny	Moc11g15310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACTCGACGACGTTGAGCTGCGGGCTGGGTCGCGACGAAAATGGAGTAGCAGAGGTTGGGTGCAACGAAAGGTTGAGGGTGAAAGGCTGGGTTCGACGAAGTGGGGCTCGACGGCGAAGTTGTTGGTGGCAAGGTTAGGCTCGACGACGACGTAGCTAGCGGCGGAAAGACATAAACGGGAGATGGAGTGGCAGAGTAAGGGAGAAAGGAGTGGGAGAGTAGGGGAGAAAGGAGTGGGAAGATGGAACTTGAGAAGGCGGAGGATAGGAGATAGAGATTGGAAACGCTAAATTAAAGTTAAAAAGGGGAGAATTGAAATCAAAATGGAACGTGAACCAAGGAAAATTAAAGAAAATAATGAAGTCAAGGGAAACAAGGAGAGAGAAATACACGTAAATTTAGGAGTAATTAATAAGAAATGAAAGGCACGGAAAAAGGGAGAGATAAATGTATCAGAAATTAATTAATAAAAAATAAAAGAGAGGGAACGAGATGTAAATTTTTTTTTCATATATATATATATATAGGTCGGTTGGTCGATTTTAGGGAGTTTTGGTAACCGACCAGTGACTAGTCGGTTTTCTAAAGACCAAATTGATCGACCGTCTATTTTGAGTAAAAACTGATCGAACCGACAGCGGTCAGTCGGTTTTGGTCGGTCAGATCGGTTTTTCACCTACATCTATTCACCCCTAAGGTTGGGTACCTTATCCTGGCAACACTATGGATATGACCTACTTTGTAAATGTTATATACGACACGATCCAGGTCGTTAGTGTGAAGACATGCGAGTGTGGTATCATATAGAATGAGTTTATATAAGACCGGACCACGAAATAGCCAATCTTTAGATGTAACGTCGTTGACTAATAGATTGCTATTTGATAGGATGAATAGGCAACTCATTCTCAATCCTGAGTTAGTTATGGACTCTTGCCCGTGAGGTCTCGTTCTTTGATCTGTATGGACGAGACCGAGCGGGGAGCTGGGAACATAACTACACAAGATGACATTCACTCCTCCTCAACTTTAGGGGAGTAGATGAGTGTTTCTTTTAGTGCTGGCTCTGGGACTTGAACAAGGGGCCTCACTCTCTCACTGAGCCGAGAGGGACTTCTGGTGATTGGTCTGACCATAACTGGGTTGTTCATTAGAGGATCAGCGGTACTTAAGGTACAAGACGTAACACAGGGGTAAAACGATAATTTGACCCATCTATGGTTACGAACACTTGTGAAGGATTGACTTGCCATTAATGGTCGATATCCGTGGACACAGAAATATTCTATAGTGAGAAGAGTTCAGCTGCGGGTTTTTAGTGAAGTAACCCGTAGTTAACGTATGTTGATTAAGGTGGTTAATGAGTTTAACCAATTAATCTTGTAACGTTGGAGCTTCTGATGTATATGTCTATTAGGTCCTCTTGGTAGCTCGTAAAGGGTAATTAAGAATTGTTCCAATTTAATTAAAGGAAATTTGAGTTAATTGTGTATGATACAATTTAATATAATGTATGATGATACATTATAAAATTATATTATCAGAGAATAATATGAATAAGATTTATATTAATACTATAAGTTAAAGTTTAATGTGAAATGGATTCATATTAACTACTATGGGTTACGAGGGAAATGTATATTTGTATATGATTCAAATATTTATTCGTTTAATTAAATCGTATATATTTAATTAATTAAATAAATAAGATTTAATTCATTATTAATTAAAATTATAAAACTCACCTCTCCCCAGCAAAAAGTGAGGTGGAGAGTGGGAGATTTCTCTCTCTCTTCTCCCTCATTGGTTTTAAAACACAGGGAAATTTCTCTGTGTTTTAGGTGGTTCAAGTTTTTGCTTTAGAAAAAAAAACATCTCTCTCAATTTAACATTCCTATTTTGCTTTCCTTCCGAAGAACCAAGATCCCACAATCCCGTTCTTATTCCTAGAGTCATAGTGAGGTAACTACGTGGCAGTGTCCAACACTTGGTTCGTGCCGAAACAAATTCCATTCTCGAGGAAGAACAGTTGTCAATGGTCTTCAAATGTAAGTCGTTTTCTTCCTCCCAAAAGGCCTAACCTCTAGTTTAAAGTAAAAGCAGTGCCGTTTTAAAATCGATTTTGTTTCCTTTCTAAACCGAGTTGAATCACAAGCAATCAACCACTTCCGTTGGGGATTCGATCCTTTTCAATTGGTGTAAGAGCCAAATCATGATTCAATTTCGTTTAGAACAAAACAGTACTGTTTTTGGTGGGTTATTTTGATGCATTTGATGCATGTTGGTTTGCTAATAGATGGTTTTTGTTTTTGGCATTTAGACTTACAATTCATGTTGATTCGATCAATGTAAAGCCCCTTGTTTTGGGCATTTTGTTGTAAATCGAGTCTGTATAGTCCGGGGTCGTTCGTAAAAAAGAGTTACTGCGAAGAAAGGCTTGATTTCAAGCATTTTAAAGGTTTTTCAGTGCTGGAACAGAGGGCAGAGCAGCAGGCCTGTGACAGTAGTGCCATGGTGCCACTGCAGCAGCGTGGCGCTGCCGCAAATTTCTGGCAAGCGCTGCAGTGCTACATTGTAGCGCTGCAGCGCTGTGCTACTGGATTTTGCTGTAGCAACGCCGCGACGCTATCTCAGGTATTTATTTCAACCTCCCATTCGTGTGTTCGAGGCTCCGCAAGCGTTTTTCCTGTTTTTTAAATTAATATAAATTAGTTTATATTTATTTAATTGTAAAATAGGATGCCAAAAACCGATATACATAACTATTTATTTTATTGCATTATGAATGTAATTATTTTATGAAATATATGTTGCATAAAGTATGTCATATAGTTTTAAAATCCCACCCTAGGTTAAGCATGATCATGCATCATATGTATATAATAGTTATAATGTATGATGACATGTTTTATTTTCATAATTGATTAATCTAAATGTTGTATTAATTAGATGAAAATAAAGTTGGATTGAGCATGACATTACTTTAGTTAATATAATTGTTATATTAATGTATGTAGTCAATGCAAGTTTATAGCTTTAATTTCTTAAATTTTATATGAGTTATAAAATTTTGGTAGATAGAAATTAAAATCTATAATAAAGAATTGCATGCAAACATAGGGTCCGAGTTAATTAATTTTAAAGGGGTTAAAAATTAATAAGACTTTATGTTATATCATCTAATGTGATTAGGGGTAGTCTTTTATTTTGTTTTAACTAGGTTTAAAATGAAATAATAGAAGACTAAATATAAAATATTGCCTATAAGGGAATCCTGTCTAAGGAAGGTTCTGTCTAGGTTGAGGTATTTAAACTGACCGTAAGGAAACACCTCTACTTGGTTTATTAAAACATTTGATAAACTAAAAAATTAATGTACAACTTCTAATATAAATAGTTATATTGGGCCGACTAAAAATTCACTTAGTTAATTTCACTTAGCCCAGATTTACCTAAGTTATAAACCCTAGTCTTAGAATACTAAGTGGGAGCAAAAGAGAATGTGTAATATACCACGTATATTTTTTGTATACAAGGTATATATGACATATTTTTTTCTCTCACGTTTCTCCTTAATGTTCACACTGTGAGTTCCATGCTCGGTCTCATGTCGCCCTGGGCACGACCTCCCTACGGAAGGTGTTTGCATGGTTCAATATCGAGGTGAATGGAGATAGTATTATTAGTAAGTGGGAGAAGGACGTGTGACAACATATCCTACGGTCTCCACCATTGGTTTGCACCATGAGATTTCATACATGACTTGCGTGACGTCCTAGAATGACCATCCCTACGGAGGGTCCATTGTGTGGAATAAAAACTAAGGCAAACTCCAGAAATGGATAAGGCTCTCTTAGGTTTTTCTTCAATATTTACCTTCCCTATGGCGGGATTATTGGAGTGAACCTCTGAAGTCTGAAAATGGTGGGTCACACTTCCGGAGAGTTGTTAAGCTAGTTAGCAATTTCCTGACCAAATAAACGAAGACTAAAGATTATAGGAATAAGAGTTATTTTGGTGTAAAATTTAGTTGAGAACGTCTTAATTCAGTGAAGGTGTAGCTGTCTGCCCTACGGTGGTTGTTGCTCTAAATCACTGAAGCATCGTTGCAAAACAATTTTGTTAGGGTGCTTAATTACTTTTGCTAAAATTTGATTAGGTTTAAAGGTTAATGCATGAAACTGATATAGGTTTGTTTTTATTTTCAACATGTCAACTTTTATTATTGCTTTGTTAGTTGCTGAAAAACTTAACGACGAGAACTACAAACAATGGAAATCGAACCTAAACATTATACTAGTGATAGATGATTTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGATTTTGCACCTAACGGCACTGTGGCAGTGTATAACGTCTATGACCAATAGATCAAATCCAATGCAAGGCAAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAGGACACAGTCACCGCTAAGGAGATCATGGACTGCTGTAGAGCATGTTTGGACAACCGTCCTCACAGGCTCAACATAAAGTCTTTAAGTTCATTTACAACTCCCACGTAAAGGAGGGCTCATCAATGCGAGAAGACATTCTCAACCTGATGGTCCATTTCAACATGGCAGAGTCGACGGGACCGTCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTGGAATCTCTTCCGAAGAGTTTCCTGCCATTTCTCAACAATGTGGTTATGAATAAGCTGGAGTACACTCTTACCATGCTCTTAAACGAGCTGCAGACCTACCAGTCTCATATGAAAAATAAGGGACGGGAAGGGGAGGAAAACGTTGCCACCTCAAAAAGGTTCCACCGATGTTCGACCTCTGGAACCAAGTCTGCACCCTTTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAGGCTACTGGTAAGGGGTCTAAACCTAACTCCGCTCTTACCGCTGCCAAGAAAGGCAAGACCAAAACCGCAGACAAAGGAAAATGTTTCCACTACAATGTAGTGGGGCATTTGAAGCGCAATTGCTCGAAATACCTGGTCGAGAAGAAGAAAACCAACGAAGGTAAATATCATTTACTTGTTTTAGAAACATGTTTAGTGGAGAATGATGACTCAGCCTGGATATTAGATTTAGGAACCACAATCACGTTTGTTCTTCGTTTTAGAGAATTAGTTCATGGAGGCAGCTTGAAGCCGAAGAGATGA

mRNA sequence

ATGGGACTCGACGACGTTGAGCTGCGGGCTGGGTCGCGACGAAAATGGAGTAGCAGAGGTTGGGTGCAACGAAAGGTTGAGGGTGAAAGGCTGGGTTCGACGAAGTGGGGCTCGACGGCGAAGTTGTTGGTGGCAAGGATGAATAGGCAACTCATTCTCAATCCTGAGTTAGTTATGGACTCTTGCCCGGGCCTCACTCTCTCACTGAGCCGAGAGGGACTTCTGGTGATTGGTCTGACCATAACTGGGTTGTTCATTAGAGGATCAGCGGTACTTAAGGTCCTCTTGGTAGCTCGTAAAGGTCTGTATAGTCCGGGGTCGTTCGTAAAAAAGAGTTACTGCGAAGAAAGGCTTGATTTCAAGCATTTTAAAGGTTTTTCAGTGCTGGAACAGAGGGCAGAGCAGCAGGCCTGTGACAGTAGTGCCATGGTGCCACTGCAGCAGCGTGGCGCTGCCGCAAATTTCTGGCAAGCGCTGCAGTGCTACATTGTAGCGCTGCAGCGCTGTGCTACTGGATTTTGCTGTAGCAACGCCGCGACGCTATCTCAGGCAAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAGGACACAGTCACCGCTAAGGAGATCATGGACTGCTGTAGAGCATGTTTGGACAACCGTCCTCACAGGCTCAACATAAAAGTCGACGGGACCGTCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTGGAATCTCTTCCGAAGAGTTTCCTGCCATTTCTCAACAATGTGGTTATGAATAAGCTGGAGTACACTCTTACCATGCTCTTAAACGAGCTGCAGACCTACCAGTCTCATATGAAAAATAAGGGACGGGAAGGGGAGGAAAACGTTGCCACCTCAAAAAGGTTCCACCGATGTTCGACCTCTGGAACCAAGTCTGCACCCTTTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAGGCTACTGGTAAGGGGTCTAAACCTAACTCCGCTCTTACCGCTGCCAAGAAAGGCAAGACCAAAACCGCAGACAAAGGAAAATGTTTCCACTACAATGTAGTGGGGCATTTGAAGCGCAATTGCTCGAAATACCTGGTCGAGAAGAAGAAAACCAACGAAGGTAAATATCATTTACTTGTTTTAGAAACATGTTTAGTGGAGAATGATGACTCAGCCTGGATATTAGATTTAGGAACCACAATCACGTTTGTTCTTCGTTTTAGAGAATTAGTTCATGGAGGCAGCTTGAAGCCGAAGAGATGA

Coding sequence (CDS)

ATGGGACTCGACGACGTTGAGCTGCGGGCTGGGTCGCGACGAAAATGGAGTAGCAGAGGTTGGGTGCAACGAAAGGTTGAGGGTGAAAGGCTGGGTTCGACGAAGTGGGGCTCGACGGCGAAGTTGTTGGTGGCAAGGATGAATAGGCAACTCATTCTCAATCCTGAGTTAGTTATGGACTCTTGCCCGGGCCTCACTCTCTCACTGAGCCGAGAGGGACTTCTGGTGATTGGTCTGACCATAACTGGGTTGTTCATTAGAGGATCAGCGGTACTTAAGGTCCTCTTGGTAGCTCGTAAAGGTCTGTATAGTCCGGGGTCGTTCGTAAAAAAGAGTTACTGCGAAGAAAGGCTTGATTTCAAGCATTTTAAAGGTTTTTCAGTGCTGGAACAGAGGGCAGAGCAGCAGGCCTGTGACAGTAGTGCCATGGTGCCACTGCAGCAGCGTGGCGCTGCCGCAAATTTCTGGCAAGCGCTGCAGTGCTACATTGTAGCGCTGCAGCGCTGTGCTACTGGATTTTGCTGTAGCAACGCCGCGACGCTATCTCAGGCAAAGGTCTACATCTTGGCGAGCATATCTGATGTGCTTGCTAAGAAGCACGAGGACACAGTCACCGCTAAGGAGATCATGGACTGCTGTAGAGCATGTTTGGACAACCGTCCTCACAGGCTCAACATAAAAGTCGACGGGACCGTCATAGACGAGCAGAGTCAGGTCAGCTTCATTCTGGAATCTCTTCCGAAGAGTTTCCTGCCATTTCTCAACAATGTGGTTATGAATAAGCTGGAGTACACTCTTACCATGCTCTTAAACGAGCTGCAGACCTACCAGTCTCATATGAAAAATAAGGGACGGGAAGGGGAGGAAAACGTTGCCACCTCAAAAAGGTTCCACCGATGTTCGACCTCTGGAACCAAGTCTGCACCCTTTTCTTCTGGAAGTAAGACTTTCAAGAAGAAGAAGGCTACTGGTAAGGGGTCTAAACCTAACTCCGCTCTTACCGCTGCCAAGAAAGGCAAGACCAAAACCGCAGACAAAGGAAAATGTTTCCACTACAATGTAGTGGGGCATTTGAAGCGCAATTGCTCGAAATACCTGGTCGAGAAGAAGAAAACCAACGAAGGTAAATATCATTTACTTGTTTTAGAAACATGTTTAGTGGAGAATGATGACTCAGCCTGGATATTAGATTTAGGAACCACAATCACGTTTGTTCTTCGTTTTAGAGAATTAGTTCATGGAGGCAGCTTGAAGCCGAAGAGATGA

Protein sequence

MGLDDVELRAGSRRKWSSRGWVQRKVEGERLGSTKWGSTAKLLVARMNRQLILNPELVMDSCPGLTLSLSREGLLVIGLTITGLFIRGSAVLKVLLVARKGLYSPGSFVKKSYCEERLDFKHFKGFSVLEQRAEQQACDSSAMVPLQQRGAAANFWQALQCYIVALQRCATGFCCSNAATLSQAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDNRPHRLNIKVDGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLNELQTYQSHMKNKGREGEENVATSKRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPNSALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVENDDSAWILDLGTTITFVLRFRELVHGGSLKPKR

Homology

[Close]

BLAST of Moc11g15310 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 67  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 126

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 127 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 186

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 187 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 246

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 247 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 306

[Close]

BLAST of Moc11g15310 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 185 KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 244

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 245 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 304

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 305 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 364

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 365 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 424

[Close]

BLAST of Moc11g15310 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

[Close]

BLAST of Moc11g15310 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-58
Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 183 QAKVYILASISDVLAKKHEDTVTAKEIMDCCRACLDN----------------------- 242
           +A+ YILAS+S+VLAKKHE  +TA+EIMD  +                            
Sbjct: 68  KARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGAS 127

Query: 243 -RPHRLNIKV-------DGTVIDEQSQVSFILESLPKSFLPFLNNVVMNKLEYTLTMLLN 302
            R H LN+ V       +G VIDE SQVSFILESLP+SFL F +N VMNK+ YTLT LLN
Sbjct: 128 VREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLN 187

Query: 303 ELQTYQSHMKNKGREGEENVATS-KRFHRCSTSGTKSAPFSSGSKTFKKKKATGKGSKPN 362
           ELQT++S MK KG++GE NVATS ++FHR STSGTKS P SSG+K +KKKK  G+G+K N
Sbjct: 188 ELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKG-GQGNKAN 247

Query: 363 SALTAAKKGKTKTADKGKCFHYNVVGHLKRNCSKYLVEKKKTNEGKYHLLVLETCLVEND 402
             L AAK  K   A KG CFH N  GH KRNC KYL EKKK  +GKY LLVLETCLVEND
Sbjct: 248 --LAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVEND 307

The following BLAST results are available for this feature:

BLAST of Moc11g15310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	7.2e-58	57.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	7.2e-58	57.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	7.2e-58	57.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	7.2e-58	57.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	7.2e-58	57.37	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]

BLAST of Moc11g15310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g15310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	3.5e-58	57.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	3.5e-58	57.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7V4M1	3.5e-58	57.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093...	[more]
A0A5A7TU93	3.5e-58	57.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	3.5e-58	57.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

BLAST of Moc11g15310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g15310.1	Moc11g15310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0005488	binding