Moc11g15120 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g15120
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 11293864 .. 11294747 (-)
RNA-Seq Expression	Moc11g15120
Synteny	Moc11g15120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAAATCGTCTTTGAAGTTTCTCCCTTCGTCCTCTCGCACAAATCGTCTTGGGCGATAGGGCTTTGCTTGGTTGCTGCTAAATTTAGGCTTATTCTGGCAAGGTTTGTCTTTCTTTTCGTTATAATTTTGTTTTTGTAAGATCCAAAAATGCTTAAAATATATATTGCATTTTATTTTTTTGCTTGGGTTTTATGCTTAGCATGGAAGGATAATGGAACAAGTATGATGTTGATGGTAAGATCCATTGATGGTAGTGATACTGTAGATAGATATTTGATAATACTTGACTTGCAAAGTACTCAGGTACTATTTTCTTTCATTCTTCTTCTTTCTTCTTTTCTTTGGTCCCCTGCTCTTCTCTTGTCATAGTTGAAGTTGTATATTATTTTGTAAATTTTAGTTTTTAACAGATGCATATGGGATTTTCTGATGTGTCTTATAAGTGTTACTTTTATTTTATCTTTCATCTTCCAAGTATAGTAATGCAAGTGTTAATATAATGAGTTTAAGAGAATTGTTTAAACTTTGAAGTATCAAACAATATGTACATAGTTGCCTTTCCTAATTACCAATATTTGTTGGTAATATTTTTATCTCTTCTCCTCATTTACTAATTTGAGCTCCTCCTGGTGATCAGTTCGACTCCAAAATCCACATACATAGAAAGCGGATGTGCCCTTATTAACGCAGTTGCAATATCAATGTTGTGTTCCCCAGCAGTCAGCCAGTGGCGGCAGAAAACGAACTCGGGTGGGCTTCACGCGATTCGCGTTTCTTGTGTTGAGAGCTTCTCATTCTCTTATAGAAACTCGCGTCCACGTCGGGGACGGGTAAAGCCCTGTGAAACAGCAGGGAGCGCTGAACAATGGAGGGAATGA

mRNA sequence

ATGGTGCAAATCGTCTTTGAAGTTTCTCCCTTCGTCCTCTCGCACAAATCGTCTTGGGCGATAGGGCTTTGCTTGGTTGCTGCTAAATTTAGGCTTATTCTGGCAAGTTCGACTCCAAAATCCACATACATAGAAAGCGGATGTGCCCTTATTAACGCAGTTGCAATATCAATGTTGTGTTCCCCAGCAGTCAGCCAGTGGCGGCAGAAAACGAACTCGGGTGGGCTTCACGCGATTCGCGTTTCTTGTGTTGAGAGCTTCTCATTCTCTTATAGAAACTCGCGTCCACGTCGGGGACGGGTAAAGCCCTGTGAAACAGCAGGGAGCGCTGAACAATGGAGGGAATGA

Coding sequence (CDS)

ATGGTGCAAATCGTCTTTGAAGTTTCTCCCTTCGTCCTCTCGCACAAATCGTCTTGGGCGATAGGGCTTTGCTTGGTTGCTGCTAAATTTAGGCTTATTCTGGCAAGTTCGACTCCAAAATCCACATACATAGAAAGCGGATGTGCCCTTATTAACGCAGTTGCAATATCAATGTTGTGTTCCCCAGCAGTCAGCCAGTGGCGGCAGAAAACGAACTCGGGTGGGCTTCACGCGATTCGCGTTTCTTGTGTTGAGAGCTTCTCATTCTCTTATAGAAACTCGCGTCCACGTCGGGGACGGGTAAAGCCCTGTGAAACAGCAGGGAGCGCTGAACAATGGAGGGAATGA

Protein sequence

MVQIVFEVSPFVLSHKSSWAIGLCLVAAKFRLILASSTPKSTYIESGCALINAVAISMLCSPAVSQWRQKTNSGGLHAIRVSCVESFSFSYRNSRPRRGRVKPCETAGSAEQWRE

Homology

[Close]

BLAST of Moc11g15120 vs. NCBI nr
Match: KAF3452218.1 (hypothetical protein FNV43_RR08316 [Rhamnella rubrinervis])

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-06
Identity = 32/52 (61.54%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 69  QKTNSGGLHAIRV-------SCVESFSFSYRNSRPRRGRVKPCETAGSAEQW 114
           Q+  SGG    RV       SCVESFSFSYR+ RPRRGRVKP E  GS EQW
Sbjct: 300 QRPASGGRKRTRVGSARFAFSCVESFSFSYRSPRPRRGRVKPSEAEGSTEQW 351

[Close]

BLAST of Moc11g15120 vs. NCBI nr
Match: CAN71465.1 (hypothetical protein VITISV_038986 [Vitis vinifera])

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05
Identity = 32/52 (61.54%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 69  QKTNSGGLHAIRV-------SCVESFSFSYRNSRPRRGRVKPCETAGSAEQW 114
           Q+  SGG    RV       SCVESFSFSYR+ RPRRGRVK  E AGS EQW
Sbjct: 445 QRPASGGRKRTRVGSARFAFSCVESFSFSYRSPRPRRGRVKSSEAAGSTEQW 496

[Close]

BLAST of Moc11g15120 vs. ExPASy TrEMBL
Match: A5AMW0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_038986 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.5e-06
Identity = 32/52 (61.54%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 69  QKTNSGGLHAIRV-------SCVESFSFSYRNSRPRRGRVKPCETAGSAEQW 114
           Q+  SGG    RV       SCVESFSFSYR+ RPRRGRVK  E AGS EQW
Sbjct: 445 QRPASGGRKRTRVGSARFAFSCVESFSFSYRSPRPRRGRVKSSEAAGSTEQW 496

The following BLAST results are available for this feature:

BLAST of Moc11g15120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3452218.1	5.1e-06	61.54	hypothetical protein FNV43_RR08316 [Rhamnella rubrinervis]	[more]
CAN71465.1	1.1e-05	61.54	hypothetical protein VITISV_038986 [Vitis vinifera]	[more]

BLAST of Moc11g15120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g15120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5AMW0	5.5e-06	61.54	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_038986 PE=4 SV=1	[more]

BLAST of Moc11g15120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g15120.1	Moc11g15120.1	mRNA