Moc11g14800 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g14800
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 11060213 .. 11064439 (-)
RNA-Seq ExpressionMoc11g14800
SyntenyMoc11g14800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGACTGTCGAATAAATAAACCTGCAGCAACGATTCTCAAGATCGGTGTGGTGCCATGCCTCTCGTACACTGCCGAAAGTACCTACGTCACTCGCTCTTCCACTCGTACGTCTGCTGCATGGGTATTGGTCCCCACTACTAGCTATCGTCACTCGAGCCTCACACGTGTCCGGCTTGATTTTCTAGATTTTCACCCTTAACAAAAATATTTTGAAAATTTATTATTTATCTAAGTCTAATAATTTGTACTACTATATCAAAGAAATATATATTGTTAATTATATTTTCTAAATTATATTTCTCAAATATATGTTATATCTTTGTTTTATCTTTTATATATATCTATTAAATTTTATTTTAACTAAAAATTAAAAAATCTAATATTTGTTAAGGTATATATCTCTAATCAATATGTAATAAGTTCCAATTTCTATCTAATAAATTGTTTGTGAAAAAAAAACTAAAATTAAAATTAAAAATAAGAAATAGAAAATAGTAATCAAACATATTTTCGTTTCTATTTCTTTTTTTTTTCAAGAAACAAGAAATAGAAATGGATAACAAGTCTCTTCCTATTTCTAGTTCTAAAAACATTACAAACAAAAAACAAGAAACAGGAAACAAGAAATGGGAAACAAGAACGTTACCAAACGGACCTTAAACTGTCGGGTTTCATCAAAATGGGTTTTAGCTCCTATTGAATTAATGAAAGTTAAAAATCTGAAATAAAATGTTTGAAGTTGCAAGAACGAAAAATAGAATAATTACAAAAATTGAAGAACTTAAAACTAATATTTAAACCTTATCATAAAAGAATTAACCACTAGAATAAAACTCAACTACGCAATATTTTAATTGAATTCTTATCTTCCATTCATTGCGGCAGAGGTTGTGGTTAATGAGAGAAATACATGATAACTAATATGCAAATCGCAATACAAATATTCAAAGAAATTAATGATTTGACACAACAAATAGTTATGTCCATATTGTCAAGTGCTTTTGAAGTTGCTAATAATATATTCGAATTCCATTGTTAGGTGTAATAATTTCTTTTTTTTTTTTTTCCTTTTTCTCTTTTGAGAGAAACCAAACTTTTGTGAGCCCATAGAATTCAAAATTAGCAGCCACAAGTGAAGAAATATTGGTACTTTTCCATGGACCATGACAAGTATGACTTTTCTTTTAATTTCTTATTTTTATTTTATTTATGAGAAGTTTAATTTTCTTTTGTGATTGCAATTTACTCCTAATAACTTTGAAGTACAAGGTTGCAATTAGTTGATTTTACTTGTTGAAAAATGTTAGATGATGCTATTTTTCTTTTTCCTCTTTTCTTAAGGACTTGACCACATTGTTTACTGTACATCTAAATTTATGTTATCTTACTCACAAAAAGTTAAATCATTATCAAATTTTGGTAGATTTTGTTGACCAAACTGGCTAGATGGATACGCTTGAGGATGGAGGAGAGAGATGAAGAGTGTTTGGAAAGAGACGATGTGCTAAATACTAATTCGGTATCAGTCAAACATCTCTCGATGCTTGAATTATATTTGAGTCTCGAGTAAGATTGAGATTTAATTGTAATATTTAACCTATCCTAAGGGATTTTTCTTAGAGATAGAAGTGAAACCTTTTATAGTTAAAGTTATATGTGACTTAGTTAGCTAGGATTGTGTTGGACGTAACTCTACAAATGGATTTGCATTATCAATATAAAAATAGACTGACTCAAGTTACATCAAGTGTCAAAGTGTGATGAATCTTAAGATGGTACTGAACACGTCGTTAGTACTGTATTTGATTAGGGTCAAGCGATGAATCATATTTTCGTTGCAAATATCTGTGACGAAACCCTCTTTCGTCGCATAACTATGCGACGGAAGTTCATTTGGTTGCATACCCCTTTATTCCAAATCCTAACTATTTTTTCTCGCTTCCTCTCCTTCCTTTTCAAATCGAAATTTTCTCTTCTCTTTCTTTGCACCGCCTCCAATCTGCTCGTCCCTCATTTCTTCCTCGCCATCATCCTCCAACTCGATCTCACATGGTCGCCGTTGGCCATGTGATTCCGGTGGCTCTCTCCAATGAATTTTGAGGTTGATTCTACACTAGGTTTGCAAATAAAGAAAATTAAAATGAAAAAAAATTAAAATTAAAACAATAATAAGGAAAATTAAAACAAAATAATTAAAATAAAAACAACAATAATAATAAATGCGACGAAAATGCGCGGTCGTCACCAAAAACCTTCAACAACTCACTTTCAGTGATGAAATTTGTGACGAAAAGAGTTTCGTCGTTGATAACCTTATGCGACGAATTTTTCTTTTCAGCGACGCTGAAAGTCTTATTTTTTGTTGCGTTAAAAAAGAAAGTTCTTCGTAAATAAAAACACTATTTTCTACGGATACTTTTGAAATAATTATTAATTCATAGTATGTTTAATGATTTTAGATGATTAAAAGTTGGCTCTAAAAATCTGTAAATAAAAGTTATTTTAAAAAAGAATTTATTGGTTTTAAACTCTATTTTAAAAAATATTGAGAGATGATCACCAACAACAAGAGTTTTCGAAATAAGAAATGACATGGGTTACCAAATACGCCTATTTCTTTAAAAAATAAAAAATAAAAAATATAACAAAAAAGACTGAAATGCCCCCAAGTAATTGGAAAATAAAATGTGATTTTTAGGCCACTGTCAACGTCACTACTATTTGGTGGGTAGGTGAGGTTGATGAACGAAGTGCCTGATGTGATAAACTAAGGTGTTTGGCGGACGAACATGATGCTTAGTTGGAAGTGCAGCGTAGACCATACTATTAAATATTTATCGACATGTCGATTTTTGATACTTTTGTGTACCCTGAGTTTTATATTGACACGAGGGGTAAATCGAAATTTCAATAATATTATAAAAAAAATCGATAAAATATGAAAACTATCGATAAAATATGAAAACTATGAACAAAATATCACTAGTATAGCCATAACATTAATATTAATCATTTTTAACTTATGGTGAAATTTTTATTTGTTCAATTATGTCTTTTTTATACATTTTTAAATTTTAATTACTTTTCCATAAATATCTATCAACATCGATATTTTATCGATATTTTTATCGACATTTTCATAAAATTGAGATCTCAAAATTTTCATCGATATCAATATTTAAAACCTTAGTATAAAGTTATAATTTTGTCTAATATTACATTTTATTTGTTTGATATTATCTTTTTATAAGGTATTATTATTATTCTTTTTCTAGAAGCATCTTGTTTGTTATTACTTATTATTACTATGAATACTATTTTTATCCTTGAAAACAAAACACTATGACGATGGCCAGTCTTTGGTAACCCTAGCCCCCTTTTGAGATAAGTTTTCTCTCCTCTTCCAAATACTTCAGTTTTTTCAAAGGAGAGCGAAGAAAGTGGGGAGTCGGTCCCCTCCTCTCCTCCTCTTATAAAGGGTGTGTATTTTCTCTTAGTCCTCTGGCTGAGTTTTTTTGAGAGGGTGTTCCTCTCTGCTTTGTTACAATTTTTCCGTGGTTTTTTTCAAGTAGTAAGTAGTATGGATCGAGATATTATACGGAGTTCGTCTCTACTTTGTTACAATTTTTACATAGTTTTTTCAAGTAGTAAGTAGCATGGATCGAGATATTATACGGACCTCTCTTGCTGTTGTAGAGGCGATTTTCGATGAGGATCCTTCTTTTCCGCTAGTTTCTATGATGGCGGGCGGTGCTGGGTGTTGGAGATCTCCCTGTTGGATGCTGATAATGCTATAGCGGCTGACAAAATCAAAACCAACATTTTTATGTATTATCCATGATTTCGTCATCGAGGCGTTTTGAAGAGTTATTAGGCACAAAATGGGAGAGGACTTCCACTTCCGATCTCTTGGGATGACTCTTCATTTTCATTGTAGTATGGTTTAGAGAACTTCCATGGTTCATAGGCAAAGATGACTGAACAGAAGGTAGGCGACGACAGGGGTGCAGCAGCGGTCGGCTTAAATACCATTTTGGAATCTGTGGAGGCTATTACTGTTAATTGTATTGAGATTCGTGATGCTGATTTGAGGATGTCTGATCTTTCCTTACCTAACATGGTTGAGAATAAGACAACTTTGGAGGCAATTATTTCCCTTCAAATCCTAAATAGGGGTGCCATAATTGACAAGATCCCTCAATTAATTGATGAATCTCTCTGA

mRNA sequence

ATGATTGACTGTCGAATAAATAAACCTGCAGCAACGATTCTCAAGATCGGTGTGGTGCCATGCCTCTCGTACACTGCCGAAAGTACCTACGTCACTCGCTCTTCCACTCGTACGTCTGCTGCATGGGCAAAGATGACTGAACAGAAGGTAGGCGACGACAGGGGTGCAGCAGCGGTCGGCTTAAATACCATTTTGGAATCTGTGGAGGCTATTACTGTTAATTGTATTGAGATTCGTGATGCTGATTTGAGGATGTCTGATCTTTCCTTACCTAACATGGTTGAGAATAAGACAACTTTGGAGGCAATTATTTCCCTTCAAATCCTAAATAGGGGTGCCATAATTGACAAGATCCCTCAATTAATTGATGAATCTCTCTGA

Coding sequence (CDS)

ATGATTGACTGTCGAATAAATAAACCTGCAGCAACGATTCTCAAGATCGGTGTGGTGCCATGCCTCTCGTACACTGCCGAAAGTACCTACGTCACTCGCTCTTCCACTCGTACGTCTGCTGCATGGGCAAAGATGACTGAACAGAAGGTAGGCGACGACAGGGGTGCAGCAGCGGTCGGCTTAAATACCATTTTGGAATCTGTGGAGGCTATTACTGTTAATTGTATTGAGATTCGTGATGCTGATTTGAGGATGTCTGATCTTTCCTTACCTAACATGGTTGAGAATAAGACAACTTTGGAGGCAATTATTTCCCTTCAAATCCTAAATAGGGGTGCCATAATTGACAAGATCCCTCAATTAATTGATGAATCTCTCTGA

Protein sequence

MIDCRINKPAATILKIGVVPCLSYTAESTYVTRSSTRTSAAWAKMTEQKVGDDRGAAAVGLNTILESVEAITVNCIEIRDADLRMSDLSLPNMVENKTTLEAIISLQILNRGAIIDKIPQLIDESL
Homology
[Close]
BLAST of Moc11g14800 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-06
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 42  WAKMTEQKVGDDRGAAAVGLNTILESVEAITVNCIEI--RDADLRMSDLSLPNMVENKTT 101
           W +M EQKVGDD GAA +  NT+L SVE I +NC+EI  +     +S+ SLP  VE+KTT
Sbjct: 49  WTRMMEQKVGDDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTT 108

Query: 102 LEAIIS 106
            + IIS
Sbjct: 109 FDTIIS 114

[Close]
BLAST of Moc11g14800 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.2e-07
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0 

Query: 42  WAKMTEQKVGDDRGAAAVGLNTILESVEAITVNCIEI--RDADLRMSDLSLPNMVENKTT 101
           W +M EQKVGDD GAA +  NT+L SVE I +NC+EI  +     +S+ SLP  VE+KTT
Sbjct: 49  WTRMMEQKVGDDGGAATIKSNTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTT 108

Query: 102 LEAIIS 106
            + IIS
Sbjct: 109 FDTIIS 114

The following BLAST results are available for this feature:
BLAST of Moc11g14800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.11.9e-0653.03uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of Moc11g14800 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g14800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ29.2e-0753.03uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of Moc11g14800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g14800.1Moc11g14800.1mRNA