Moc11g14680 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14680
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 10957664 .. 10961805 (-)
RNA-Seq Expression	Moc11g14680
Synteny	Moc11g14680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAACCTTCGACCCATGGGACAGGGCGCAATGTTTGCACACTTGTGTTGCCTGACAGTTCCTTGAGATTCACATTCTCGAAGGAAGATGCGTAAGACCTTAGTCTTGTAACGCTACACAATGACAAATGCATGTGTCATGAGGTAGCTCACTTAGGCCATAGAGCCTAGGGGTGGTGGAGAGTTGACACTATGCCTCCTCCTATAGTACATTTTATGGAATTTTTGCTTTGGCAAGCGTGTACGTGCAAAGTGGCAAAACTTGGCATATCTCACTAACACAAAACTTGACATGCTTGCATATCTCACTAATATGCATCTAAATCCAAAGCCGCTCTTCCAAACTCTCGATGGAACTCCGACTTTTGGGGTCATGGCCTGAGGCTCTAACTGACCTCCACCGAGCTTGTCACTAACACCACTAACACTGCCACTGTTTCTAATCTTCCTTGTGCCTTAGCTAGGCTTTCTCGTGCACATCCTCATGGTATGTTAGATTATGCACCATCCTCCTTGGTGTATCACGACACTTCTCTCTCGACCCTCGACATGGCCCGATACATGACATATGCACGTTGCCACCATTTGTCTGCTTCGTGGGCGTAACAACATACTCTCTTCTAGTATGGTTGTGATATTCTCCCCACTTAAACTATCATTGTCCTCAATGACATACTCATGGGGTACAATCCGAATATTGCACATAGAATTGTAACACTCTCCCCCTCACTTAAATTCATCATCGTCCTGATGACGACCCGATACATGGACTAGCGACTAGCTGACTTGCTGAAAAACTTGTGTATTAGAGTGAATATGGAACTGCACACTAACTGTGAGCTATTGCTTCCAATCTTGTTTGTGCTTTAGCTAGGCTTTCTCGTGCACATCCTCATTGCCAATTGGTTTTGAGATAGAACTCATGAATATTGATATGGTATCAGAACCCAAAAGCTCAAACGAGCATCCGATCAAGATTGGTGAACCCAAAAGAGATCATCTTGAGGGGGCATGTTAAGGACCCCACATTTAAAAGATAAGGAACCTATCAAAGATTTATAATATAAGTAGGCTACTCCTCTCATTGTCAATTGATTTTCAGATGAAACCCCATGAATATTGATATGGTATCAAAGCTCAAAGCTCAAATGAGCATTCGATCTGAAAATGAGATTCAGCCAAGATTGGTAAACCCAAAAGATTTCGAGACGAATCCCATGAATATTGATAGAACTCTCTATTGGTATATGCTCTTGGATAATTAGATATTTCTTTGAGAACTTTGGAAACTGTTATATTCTGGGATGGAGAATCACCCTTCCATACCAAATATGAAGGTTTGTTGAAGTGGCATATGTTGTCTCTTCCAAGCCGAAAATTGAAAAGCTCCTACTTTGAAAATTAGTCTGAGGATTGTAATATTTTAATAATTGATTTCAAATTTAATAATACTTTTTAAAAAGTCCGATAATTATTTCTTATTTTTTTAGTTGGGATAAAATGTAGTAGATTTAATATAAATATATAACGGATTAAAAATAATATAAAACAATTATAAAGAGTTCATAATATCTCATACAATTCAAGTCAACCTAATGTAATAATAAAAGCAGTAAAATTTTCTTATGGACTTCATTTGCCAAAAAAAAAAATCTTATGGACTTATTAATATGTTAATATTTAAATAGGTCTGTTATAGTGTTTTTCTTTGAAATACATCATCTGGGATGAGAATTCGAATTCACGAGCTATTATTTGGAGATACATGTCTTAACCGGTTCAACTATGCTCAAGTCGGCAAATAAGCCTATGGTTAAACTTATTTACCTTTATATTCCATGTGTTTAAATATTTTCAAATATATATTCATCTATCATTTTATATTATATTTTCTTTTTCCATGTTTTTCTTTATTTTATTTAGTTTATGTTTAGGTAATTAAACAACAGACATTTTTTCATTTTTAATTAAACATACATTAAGATTTTATTCTTTTATTATAAGGTTTTATGTTTGTCCATAACAGCTTTTTTTTTCTTTTCTTTATTTCCTACTCTGATTTGAGTTTGTAGTAGAATTCCTGAGTTTGTAGTAGAATTCCTCTCCACTCTGTTTAGCATGTCTTTCTATTATTATTTTTTAAATTATTTTGCCCCATTTTTTTTAGTTCCCTATTCATCTCCTAAAACCCAAATGTTGATTTTTCTTTTCTTCTTTTGGTTTTTCTTATAAAATCCATAGAAGAAAATTTTTGCTTTCCCAGTAATTCTCTCTTAAAAAAAAAAACCACCAAATCTCCTATAGAGCTCAATCGAGATCATACCAAATAAAACCTAAAAAAGAGAGAGAAGAAAGTTTTTTTTTCTTTGACAGGGTAAATGTAAAATACCGTATTCATACTAGTTTCTTTATTTGGTAAAAGGAAATTAAAAACCTACCAAAATCGAGGTAATTAAAAAATAGAGATTTTAATTAAAAAGGGTAAAGAAGTGAAATTGAAAGGTCAAGCAAAGTGAAGAAAAAAAACGTCAGATAACATCCACACAAGGAAAAGAGAGTGAGGAAAGAGGAGAAAGAGATAGACTAAATTACGCTTCCGATTTAAAAAAAAAATTGAGAGAGAAATGAGAACAAAAACTAAGAAACTTTCAAATACATTTATGTTTCTTTATAAAAAAACAAACATCGTAATATATTTTCTTAGAAAAAAAACAAGAACAAAAAGAAGAAAGAAAAAAAATTGTTCAATGATTATGAAACGAACTCTAAACTTTCAATGACGTATTACAACTTAGGTGCTTTTCCTATGGGGAAATGGTTATGCTTCAATTGAAATTTGATCCCTCAATGACAAATTTTTTCATTTAATTAAACCCTTAAAATACGTAGCTGCAGGGAGAAAATAGAGATCAGGCTAAGCAACCGAAAAGAGGAAAGAGAGTCGAAGAAGGAGCGGACCGGAGAGAGGTAAGTGGGTCGGAGCTCAGCGACCCAGGCCGGCCGTAGCCGACCCGGGGTCGGCACCGAGTCGACTTGGTCTCGGCCCTGAATAGTACAGCGTGAGGCCCATTCTGTGATCTCCTGAGTGCATAAGGATTCGACGAATGTAAACTCTAGGAGGATTAGGGTTCAGCTGATCCTGAAGGGATTAGGGGTCGACCATTATAAATACAAGAGTAAGTCAAACCCTAGAGGTATGCTTAACAACCCTACTCTTTATACCAGACTACTCCGATACTGACTTAAGCATCGGAGCCCATACGGCAAGAGCCACACCAGTCTTTGGTGCTATTCTGTTTTGCAAGTTTCGTCAATCCCTTTTATTCTTGAAGATTGGTGCAAATTTGGCGGAATCCCATGAGAACAAATTTCTGAATCAACAATTGGCACCGTCTGTGGGGACGACTAGAGATTGCAGACTTGTCAATATGAGCTCGGGAAGGAGTCCACGACATTCTGATGAAGAGTGCCACCACATGAGGAAGGTTAATAGGGACACAACTCCGCCCGAGGCAGTCGAAGGAGAGATTGACCGACCAGTTCCCGAAGATACCGGCCGACCAGTTCTCGGACCGACAGATACCGACCGACCAATTCTTGGATCGAAAGACAAGCCGATCGAAGGTCCAAATCAACTGGGCGACAAGATGGCCGCCTTAGAAGAGAAGGTAGAGGGAATGCACCAGAGCATGTCCCTGCTTCTGCAAAAACTAGAGCAACATGAGGTGGAACAACCAGCGCTATTTCGCGATCCACGAAAGGGAAAAGCTCCGATGATTGAAGAAGTTGGGGAGACAACCAGCCATGCACAGAGCAAACTGAAGATAGGAGGAAACGACAAACCTCGAACGAATGTCCCCGACCGGTCAGGTCGGCAAGCAGATGTACGACAACAAGGTCTGTCGCGCCCAACGAAAACAAGAGCAACGCAGTTGACCGAGCCGGCCTCAGGCATACTGCTGTCGACAGAGAAGGCCATCCGATCGAATTGTGCGATCAGAGATACGATCAGGAGGACACCAAAACCAGAAGTTTGGTCTCGAGGAGCTGATGAACCAGGCAGACTCTCCCTTTACGGAAAAGATAAGGAAGGAAAAAGCTCCTCCGAAGTTCAAGCTACCTGCCATCACACAATATGA

mRNA sequence

ATGGTGCAACCTTCGACCCATGGGACAGGGCGCAATGTTTGCACACTTGTGTTGCCTGACAGTTCCTTGAGATTCACATTCTCGAAGGAAGATGCGCTTTCTCGTGCACATCCTCATGACTACTCCGATACTGACTTAAGCATCGGAGCCCATACGGCAAGAGCCACACCAGTCTTTGGTGCTATTCTGTTTTGCAAGTTTCGTCAATCCCTTTTATTCTTGAAGATTGGTGCAAATTTGGCGGAATCCCATGAGAACAAATTTCTGAATCAACAATTGGCACCGTCTGTGGGGACGACTAGAGATTGCAGACTTGTCAATATGAGCTCGGGAAGGAGTCCACGACATTCTGATGAAGAGTGCCACCACATGAGGAAGGTTAATAGGGACACAACTCCGCCCGAGGCAGTCGAAGGAGAGATTGACCGACCAGTTCCCGAAGATACCGGCCGACCAGTTCTCGGACCGACAGATACCGACCGACCAATTCTTGGATCGAAAGACAAGCCGATCGAAGGTCCAAATCAACTGGGCGACAAGATGGCCGCCTTAGAAGAGAAGGTAGAGGGAATGCACCAGAGCATGTCCCTGCTTCTGCAAAAACTAGAGCAACATGAGGTGGAACAACCAGCGCTATTTCGCGATCCACGAAAGGGAAAAGCTCCGATGATTGAAGAAGTTGGGGAGACAACCAGCCATGCACAGAGCAAACTGAAGATAGGAGGAAACGACAAACCTCGAACGAATGTCCCCGACCGGTCAGGTCGGCAAGCAGATGTACGACAACAAGGTCTGTCGCGCCCAACGAAAACAAGAGCAACGCAGTTGACCGAGCCGGCCTCAGGCATACTGCTGTCGACAGAGAAGGCCATCCGATCGAATTGTGCGATCAGAGATACGATCAGGAGGACACCAAAACCAGAAGTTTGGTCTCGAGGAGCTGATGAACCAGGCAGACTCTCCCTTTACGGAAAAGATAAGGAAGGAAAAAGCTCCTCCGAAGTTCAAGCTACCTGCCATCACACAATATGA

Coding sequence (CDS)

ATGGTGCAACCTTCGACCCATGGGACAGGGCGCAATGTTTGCACACTTGTGTTGCCTGACAGTTCCTTGAGATTCACATTCTCGAAGGAAGATGCGCTTTCTCGTGCACATCCTCATGACTACTCCGATACTGACTTAAGCATCGGAGCCCATACGGCAAGAGCCACACCAGTCTTTGGTGCTATTCTGTTTTGCAAGTTTCGTCAATCCCTTTTATTCTTGAAGATTGGTGCAAATTTGGCGGAATCCCATGAGAACAAATTTCTGAATCAACAATTGGCACCGTCTGTGGGGACGACTAGAGATTGCAGACTTGTCAATATGAGCTCGGGAAGGAGTCCACGACATTCTGATGAAGAGTGCCACCACATGAGGAAGGTTAATAGGGACACAACTCCGCCCGAGGCAGTCGAAGGAGAGATTGACCGACCAGTTCCCGAAGATACCGGCCGACCAGTTCTCGGACCGACAGATACCGACCGACCAATTCTTGGATCGAAAGACAAGCCGATCGAAGGTCCAAATCAACTGGGCGACAAGATGGCCGCCTTAGAAGAGAAGGTAGAGGGAATGCACCAGAGCATGTCCCTGCTTCTGCAAAAACTAGAGCAACATGAGGTGGAACAACCAGCGCTATTTCGCGATCCACGAAAGGGAAAAGCTCCGATGATTGAAGAAGTTGGGGAGACAACCAGCCATGCACAGAGCAAACTGAAGATAGGAGGAAACGACAAACCTCGAACGAATGTCCCCGACCGGTCAGGTCGGCAAGCAGATGTACGACAACAAGGTCTGTCGCGCCCAACGAAAACAAGAGCAACGCAGTTGACCGAGCCGGCCTCAGGCATACTGCTGTCGACAGAGAAGGCCATCCGATCGAATTGTGCGATCAGAGATACGATCAGGAGGACACCAAAACCAGAAGTTTGGTCTCGAGGAGCTGATGAACCAGGCAGACTCTCCCTTTACGGAAAAGATAAGGAAGGAAAAAGCTCCTCCGAAGTTCAAGCTACCTGCCATCACACAATATGA

Protein sequence

MVQPSTHGTGRNVCTLVLPDSSLRFTFSKEDALSRAHPHDYSDTDLSIGAHTARATPVFGAILFCKFRQSLLFLKIGANLAESHENKFLNQQLAPSVGTTRDCRLVNMSSGRSPRHSDEECHHMRKVNRDTTPPEAVEGEIDRPVPEDTGRPVLGPTDTDRPILGSKDKPIEGPNQLGDKMAALEEKVEGMHQSMSLLLQKLEQHEVEQPALFRDPRKGKAPMIEEVGETTSHAQSKLKIGGNDKPRTNVPDRSGRQADVRQQGLSRPTKTRATQLTEPASGILLSTEKAIRSNCAIRDTIRRTPKPEVWSRGADEPGRLSLYGKDKEGKSSSEVQATCHHTI

Homology

[Close]

BLAST of Moc11g14680 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 3.5e-10
Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 108 MSSGRSPRHSDEECHHMRKVNRDTTPPEAVEGEIDRP-VPEDTGRPVLGPTDTDRPILGS 167
           M+  RSPR SD+ C   R++N D       E    +P +    G P      T       
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTT------- 60

Query: 168 KDKPIEGPNQLGDKMAALEEKVEGMHQSMSLLLQKLEQHEVEQPALFRDPRKGKAPMIEE 227
                  P  L  + A LE+KVEGM Q M+ +L++ E+ E ++  L RDPRKGK P   E
Sbjct: 61  -------PEPLQKQFAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSE 120

Query: 228 VGETTSHAQSKLKIGGNDKPRTNVPD 253
             E+T+ A SKL+IGGN + RT + D
Sbjct: 121 TEESTNSAGSKLRIGGNTRRRTQIFD 132

[Close]

BLAST of Moc11g14680 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-10
Identity = 54/146 (36.99%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 108 MSSGRSPRHSDEECHHMRKVNRDTTPPEAVEGEIDRP-VPEDTGRPVLGPTDTDRPILGS 167
           M+  RSPR SD+ C   R++N D       E    +P +    G P      T       
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTT------- 60

Query: 168 KDKPIEGPNQLGDKMAALEEKVEGMHQSMSLLLQKLEQHEVEQPALFRDPRKGKAPMIEE 227
                  P  L  + A LE+KVEGM Q M+ +L++ E+ E ++  L RDPRKGK P   E
Sbjct: 61  -------PEPLQKQFAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSE 120

Query: 228 VGETTSHAQSKLKIGGNDKPRTNVPD 253
             E+T+ A SKL+IGGN + RT + D
Sbjct: 121 TEESTNSAGSKLRIGGNTRRRTQIFD 132

The following BLAST results are available for this feature:

BLAST of Moc11g14680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145129.1	3.5e-10	36.99	uncharacterized protein LOC111014646 [Momordica charantia]	[more]

BLAST of Moc11g14680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g14680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUA7	1.7e-10	36.99	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of Moc11g14680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14680.1	Moc11g14680.1	mRNA