Moc11g14100 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g14100
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	dr1-associated corepressor homolog isoform X2
Location	chr11: 10461837 .. 10465205 (+)
RNA-Seq Expression	Moc11g14100
Synteny	Moc11g14100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAATCAAAGTAGAACTTCAGAATATGAAGAAAGAAGGTTCAAGTATCAAGGATTATGTCGTAAAGGTAAAAAATCTTGTAAATTCACTCACTGCTGTGGGATGCAAAGTTACTTTACAAGAGCATATTGTTTTTTTTATCCTTCGGGTCTAGGGTCCGATTATGATTCAATTGTCTCTGTGATTTCTGCTAAGACAAAAACGAAACCACTACAAGAAGTTTATGCGCTTCTAATGTCTCATGAAAGTAGACTTGAAAGAAATTCTGCAATTAATCCAGATGGTTCAACCCCAATAGTTCAACCTTATATTTCAGAATCATGAAAAGAAATCTGCAGAAGAATGGTAACAGTCATAACAACAATAGAGGAAATATAACAAATGGTAGTAGATTTAATCGTGGAGGAAGAACTTGGAATAATGGTAACAGGATTCAGTGTCAAATTTGCGGTAAATTTGGCTATACGGCATCAAAATGTTACTTTAGATTTAATGGTCAACAACAGCGAAATGGAATGAACAATTACTTCCAACAATCATTAAACAATCAGAATTTTCAATTCAATGGTCAGAATGAGTCTCATGGACCAAATTGTCAGATGTAGGTTATGATAGTTACTCCTAACCCAAGTATAGACAATTGTTTGGTATCGTGATTCTGGTGCAACAAATCACATCACCAACACTTTTGATAACTTCACAACTGGTAATGAGTATTCCGGTGGCAGTCAAATTCATGTGGGTAATGGTGCAGAATATTCTTTACACTGACAAAACCTTTCTCACTCCCATAAATTCTTCTTTAGTTAATTCTATCTCTCCCTTATCTCATGTCTTTCATGTTCAAAATCTACTACATGTACTTAAAATGACCAAAAATCTCCTCAATGTAAGCCAATTTGCAAAAGATAATAATGTGTTTTTTGAATTTCATCCCTCTACTTACTTTTGTGAAGGATCAACTTCACTGGGAAAATTATGCTCCAAGGACAACTCCGTGGAGGACTTTACAAAGTATGATGAAAGCTCATCCTAGACATGACTCTTCTTCCACATTCAATTCTACTGCTCTTATTGCTTCATGCATGCAGTTCTTCGCCAAACTCTAATTTTGATGTATCTTGCACTAATAAAATACATTTATCTTATCATTCTGCTACTTCTTCTAGTATAGACTTGTGGCATAACCGCTTAGGTCACCCTACTTCTGCTATTGTTTCCAAAATTCTCAAAGATTGTAATGTTTCCTATTCACCTAATAAGATACATCAAATTTGTCACTGATAACTCTCCAAAACAGAGTTATTCTAGCGTTTATTTGGGTAGTTTTATACAAGGAATTGTCAAAGTGTATCGGTTTTGGTGCGCAATTAGCATAGAAAAGAGTAGAAAATGGAATCCGAGCTAAAAGTCCAATGTATTGAATGTTGTGGCTAAATATTGCACTAAATGCTTTTATTTCTGGTATAAATGCACAGGTTTGGATGCAAAAGACTAAGCATAAAGGAAGTGCGAAAATCCAGAGAAGAGCGCAGGATAATTTCGAGGCAGAGCAAATAAATGCTGGAGCGAAGCAGAGTTGGAGCATGGATTCACTGTGTAGTAACAGCCCAGACACGGGATTTACCGTGTCTGTACAATTTTCAGCTTGGTGCCCTAAATTTGGAACCCAATATAAAAGGGGAATGTTGCCCTAGCCGCCACATACAGAGATCCCTAGAGAAGCATGTTTTTTAGAGCTGAAAAGATAAAGAGAACTATTCTCTCCATTTCGGGAGAAAGTTGACAACAGAAGGAGACATTTCTCTACGATTTCGAGCTAACAACTTCTTTCTTCGGTTTTCTGTTGTCTCCCTAGGATGAGTTGTCTTCTTCTTCTACCCATTTTATTTTCTTCTTCATTTATGGGCTAAACCCCATTTCGGGGGAGATTCTCATGCTGTAACTATTGTAAACTGAACCTCTAACTACTATATTTGTTTTTAAATGAAGCTGTATTAATTTCTGATATCTTATTGAGCATTTTTGGCCACTATGTTTTATTTGCTTGCTTCTATATTCACCCGGGAGGGCTTATGGTTGTTGACTTGCTTCATTTGGGATTAACGCTTTTCTATAGCTTTGTGGATTCTCAGGAATGGGGTCCCTTAATCTTGCCTAGAGCTTATTTTTACTACTTGGAACTTAGGAACGAGAGTTGTGGGTTTTCAGGTTCGGGTGTCTCGGAAGGGAACCAAGTCGAGCTAGGCATTAACGCATGTTTGTTGGTTAGAGGGTAGGTTGATAGGTTTGTGAATGCATATGAGTCTCCCCCACTTTTCCATATCTGTATTCTCCCCGTTTTCATATTCTGTGCTGGTTCTTTTGCTTGTTATCAGCTTCACGAAGTGTGTCTGCTGCTGTGATCTGTTTAGTGCTTGTTTATTTTATGTTTAGAGCTTGGAATATATTGTAGATCACGAGACAGGACGCATATTTCATAAGAATCGAAGAGAACAATGGAGAATCCAAGCTGAAGCAAACATGAATCCACCCAACCCAAATATGCGCTAGCCACCGAATGTGAGGATCGAAGAAATAGTAGATGGGGTTCCTGTTGCTGCTGACCCTGAGGTAGCAGTCCACCAACGACAGAGAAATCGGGGCGTATGCTGCTCCAACATTTTATAATTTCAACCCAATAATCATGGAGCCAGAAATTGCAGCCGTAAAATTTGAGCTTAAGCCAGTTATGTTTCAGATGCTCCAAACGGTGGGCCAATTTCTCGGACATTCTACGAAGGACCTGCATCAACATCTGAAGTTTTTTATAGGAGTTTGCAATTCTTTTAAGGATGAATGATGCAGCAAAGAAGTGCTGTTCCCTTATTCAATCAGAGATGAAGCATGGACTTGGTTAGAGTCACTCCCTTCATAATCGATTACAAGCTGGGACGACTTGGCTGGAAAATTTTTGATTAAGTACTTCCCACCAAGCAATAATGCTAAGTACATAAGTGAAATCAACAATTTTTAGCAATTTGTTGGGGAGTTGGTTAGTGAGTATTGGGAGTGTTTTAAACGGCTTCTACAAAAATGCCCTCACCATGGGATTCCAAGATGCATCCAGATCGAAACATACTATAATGGATTGGATAACACCACCCGTCTTGTCATCGATGCGTCAGTAAATAGGGCTTTGCTAGCAAAACCTTATGCTGAAGCATTCAATATCTTAGAGTGGATATCATCGAACAATCATTCATGGTCTGACCTTAGAGCCATTCAAGGAAGAGGAAGCAAGGGACTGAACGAATTCGAGTCATACTCTACATTAAATTCAAAGATTGGAAATTTGACAAATTTGGTTATGAAGAGCATGACATAG

mRNA sequence

ATGCAAATCAAAGTAGAACTTCAGAATATGAAGAAAGAAGGGTCCGATTATGATTCAATTGTCTCTGTGATTTCTGCTAAGACAAAAACGAAACCACTACAAGAAGTTTATGCGCTTCTAATGTCTCATGAAAGTAGACTTGAAAGAAATTCTGCAATTAATCCAGATGGATCAACTTCACTGGGAAAATTATGCTCCAAGGACAACTCCGTGGAGGACTTTACAAATTCTTCGCCAAACTCTAATTTTGATGTTTGGATGCAAAAGACTAAGCATAAAGGAAGTGCGAAAATCCAGAGAAGAGCGCAGGATAATTTCGAGGCAGAGCAAATAAATGCTGGAGCGAAGCAGAGTTGGAGCATGGATTCACTGTGTAGTAACAGCCCAGACACGGGATTTACCGTCTTTGTGGATTCTCAGGAATGGGGTCCCTTAATCTTGCCTAGAGCTTATTTTTACTACTTGGAACTTAGGAACGAGAGTTGTGGGTTTTCAGGTTCGGGTGTCTCGGAAGGGAACCAAGTCGAGCTAGGCATTAACGCATGTTTGTTGGTTAGAGGGATGAATGATGCAGCAAAGAAGTGCTGTTCCCTTATTCAATCAGAGATGAAGCATGGACTTGTAAATAGGGCTTTGCTAGCAAAACCTTATGCTGAAGCATTCAATATCTTAGAGTGGATATCATCGAACAATCATTCATGGTCTGACCTTAGAGCCATTCAAGGAAGAGGAAGCAAGGGACTGAACGAATTCGAGTCATACTCTACATTAAATTCAAAGATTGGAAATTTGACAAATTTGGTTATGAAGAGCATGACATAG

Coding sequence (CDS)

ATGCAAATCAAAGTAGAACTTCAGAATATGAAGAAAGAAGGGTCCGATTATGATTCAATTGTCTCTGTGATTTCTGCTAAGACAAAAACGAAACCACTACAAGAAGTTTATGCGCTTCTAATGTCTCATGAAAGTAGACTTGAAAGAAATTCTGCAATTAATCCAGATGGATCAACTTCACTGGGAAAATTATGCTCCAAGGACAACTCCGTGGAGGACTTTACAAATTCTTCGCCAAACTCTAATTTTGATGTTTGGATGCAAAAGACTAAGCATAAAGGAAGTGCGAAAATCCAGAGAAGAGCGCAGGATAATTTCGAGGCAGAGCAAATAAATGCTGGAGCGAAGCAGAGTTGGAGCATGGATTCACTGTGTAGTAACAGCCCAGACACGGGATTTACCGTCTTTGTGGATTCTCAGGAATGGGGTCCCTTAATCTTGCCTAGAGCTTATTTTTACTACTTGGAACTTAGGAACGAGAGTTGTGGGTTTTCAGGTTCGGGTGTCTCGGAAGGGAACCAAGTCGAGCTAGGCATTAACGCATGTTTGTTGGTTAGAGGGATGAATGATGCAGCAAAGAAGTGCTGTTCCCTTATTCAATCAGAGATGAAGCATGGACTTGTAAATAGGGCTTTGCTAGCAAAACCTTATGCTGAAGCATTCAATATCTTAGAGTGGATATCATCGAACAATCATTCATGGTCTGACCTTAGAGCCATTCAAGGAAGAGGAAGCAAGGGACTGAACGAATTCGAGTCATACTCTACATTAAATTCAAAGATTGGAAATTTGACAAATTTGGTTATGAAGAGCATGACATAG

Protein sequence

MQIKVELQNMKKEGSDYDSIVSVISAKTKTKPLQEVYALLMSHESRLERNSAINPDGSTSLGKLCSKDNSVEDFTNSSPNSNFDVWMQKTKHKGSAKIQRRAQDNFEAEQINAGAKQSWSMDSLCSNSPDTGFTVFVDSQEWGPLILPRAYFYYLELRNESCGFSGSGVSEGNQVELGINACLLVRGMNDAAKKCCSLIQSEMKHGLVNRALLAKPYAEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT

Homology

[Close]

BLAST of Moc11g14100 vs. NCBI nr
Match: XP_022156835.1 (uncharacterized protein LOC111023669 [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-19
Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 178 GINACLLV----RGMNDAAKKCCSLIQSEMKHGLVNRALLAKPYAEAFNILEWISSNNHS 237
           GI  C+ +    +G++DA +               N ALL KPYAEAFNILE ISSNNHS
Sbjct: 45  GIPRCIQIEKYYKGLDDATRLVID--------ASTNGALLVKPYAEAFNILERISSNNHS 104

Query: 238 WSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT 274
           WSD RAIQGRG KGLNE ESY  LNSK+ NLTNLVM+SMT
Sbjct: 105 WSDPRAIQGRGGKGLNESESYYALNSKVENLTNLVMRSMT 136

[Close]

BLAST of Moc11g14100 vs. NCBI nr
Match: XP_022159060.1 (uncharacterized protein LOC111025500 [Momordica charantia])

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-16
Identity = 56/100 (56.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 178 GINACLLVR----GMNDAAKKCCSLIQSEMKHGLVNRALLAKPYAEAFNILEWISSNNHS 237
           GI  C+ ++    G++DA +               N ALLAKPYAEAFNILE ISSNN S
Sbjct: 45  GIPRCIQIKTYYNGLDDATRLVID--------ASANGALLAKPYAEAFNILERISSNNQS 104

Query: 238 WSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT 274
           WSD RAI G+GSKG NE ES++ LN KI NLT+LVM+SMT
Sbjct: 105 WSDPRAIHGKGSKGFNESESFTALNLKIENLTDLVMRSMT 136

[Close]

BLAST of Moc11g14100 vs. NCBI nr
Match: XP_022150863.1 (uncharacterized protein LOC111018910 [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-14
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 209 NRALLAKPYAEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLV 268
           N ALLAKPYAEAFNILE ISSN HS SD RAIQGRG+K LNE +SYST NSKI N+ +LV
Sbjct: 197 NEALLAKPYAEAFNILERISSNKHSRSDTRAIQGRGTKRLNESKSYSTPNSKIENVIDLV 256

Query: 269 MKSMT 274
            +SMT
Sbjct: 257 RRSMT 261

[Close]

BLAST of Moc11g14100 vs. NCBI nr
Match: XP_022157438.1 (uncharacterized protein LOC111024136 [Momordica charantia])

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-11
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 218 AEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT 274
           AEAFNILE ISSNNHSW D +A+QG+ SK L E ESY+TLNSKI NLT+LVM+S+T
Sbjct: 109 AEAFNILERISSNNHSWFDPKAVQGKSSKALVESESYTTLNSKIENLTDLVMRSIT 164

[Close]

BLAST of Moc11g14100 vs. NCBI nr
Match: XP_022158598.1 (uncharacterized protein LOC111025053 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 4.3e-11
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 209 NRALLAKPYAEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNL 268
           N ALL KPYA+A NILE ISS+NHSWSD RAI+G+ SK L E ESY+TLNSKI  LT+L
Sbjct: 124 NGALLVKPYAKALNILERISSSNHSWSDHRAIEGKSSKELVESESYTTLNSKIEILTDL 182

[Close]

BLAST of Moc11g14100 vs. ExPASy TrEMBL
Match: A0A6J1DRG1 (uncharacterized protein LOC111023669 OS=Momordica charantia OX=3673 GN=LOC111023669 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-19
Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 178 GINACLLV----RGMNDAAKKCCSLIQSEMKHGLVNRALLAKPYAEAFNILEWISSNNHS 237
           GI  C+ +    +G++DA +               N ALL KPYAEAFNILE ISSNNHS
Sbjct: 45  GIPRCIQIEKYYKGLDDATRLVID--------ASTNGALLVKPYAEAFNILERISSNNHS 104

Query: 238 WSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT 274
           WSD RAIQGRG KGLNE ESY  LNSK+ NLTNLVM+SMT
Sbjct: 105 WSDPRAIQGRGGKGLNESESYYALNSKVENLTNLVMRSMT 136

[Close]

BLAST of Moc11g14100 vs. ExPASy TrEMBL
Match: A0A6J1DXK5 (uncharacterized protein LOC111025500 OS=Momordica charantia OX=3673 GN=LOC111025500 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.6e-17
Identity = 56/100 (56.00%), Postives = 67/100 (67.00%), Query Frame = 0


Query: 178 GINACLLVR----GMNDAAKKCCSLIQSEMKHGLVNRALLAKPYAEAFNILEWISSNNHS 237
           GI  C+ ++    G++DA +               N ALLAKPYAEAFNILE ISSNN S
Sbjct: 45  GIPRCIQIKTYYNGLDDATRLVID--------ASANGALLAKPYAEAFNILERISSNNQS 104

Query: 238 WSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT 274
           WSD RAI G+GSKG NE ES++ LN KI NLT+LVM+SMT
Sbjct: 105 WSDPRAIHGKGSKGFNESESFTALNLKIENLTDLVMRSMT 136

[Close]

BLAST of Moc11g14100 vs. ExPASy TrEMBL
Match: A0A6J1DAK9 (uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018910 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.8e-15
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 209 NRALLAKPYAEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLV 268
           N ALLAKPYAEAFNILE ISSN HS SD RAIQGRG+K LNE +SYST NSKI N+ +LV
Sbjct: 197 NEALLAKPYAEAFNILERISSNKHSRSDTRAIQGRGTKRLNESKSYSTPNSKIENVIDLV 256

Query: 269 MKSMT 274
            +SMT
Sbjct: 257 RRSMT 261

[Close]

BLAST of Moc11g14100 vs. ExPASy TrEMBL
Match: A0A6J1DTD1 (uncharacterized protein LOC111024136 OS=Momordica charantia OX=3673 GN=LOC111024136 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.3e-12
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 218 AEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNLVMKSMT 274
           AEAFNILE ISSNNHSW D +A+QG+ SK L E ESY+TLNSKI NLT+LVM+S+T
Sbjct: 109 AEAFNILERISSNNHSWFDPKAVQGKSSKALVESESYTTLNSKIENLTDLVMRSIT 164

[Close]

BLAST of Moc11g14100 vs. ExPASy TrEMBL
Match: A0A6J1DWK1 (uncharacterized protein LOC111025053 OS=Momordica charantia OX=3673 GN=LOC111025053 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-11
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 209 NRALLAKPYAEAFNILEWISSNNHSWSDLRAIQGRGSKGLNEFESYSTLNSKIGNLTNL 268
           N ALL KPYA+A NILE ISS+NHSWSD RAI+G+ SK L E ESY+TLNSKI  LT+L
Sbjct: 124 NGALLVKPYAKALNILERISSSNHSWSDHRAIEGKSSKELVESESYTTLNSKIEILTDL 182

The following BLAST results are available for this feature:

BLAST of Moc11g14100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156835.1	4.2e-19	60.00	uncharacterized protein LOC111023669 [Momordica charantia]	[more]
XP_022159060.1	2.0e-16	56.00	uncharacterized protein LOC111025500 [Momordica charantia]	[more]
XP_022150863.1	1.4e-14	75.38	uncharacterized protein LOC111018910 [Momordica charantia]	[more]
XP_022157438.1	1.9e-11	73.21	uncharacterized protein LOC111024136 [Momordica charantia]	[more]
XP_022158598.1	4.3e-11	71.19	uncharacterized protein LOC111025053 [Momordica charantia]	[more]

BLAST of Moc11g14100 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g14100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRG1	2.1e-19	60.00	uncharacterized protein LOC111023669 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DXK5	9.6e-17	56.00	uncharacterized protein LOC111025500 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DAK9	6.8e-15	75.38	uncharacterized protein LOC111018910 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DTD1	9.3e-12	73.21	uncharacterized protein LOC111024136 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DWK1	2.1e-11	71.19	uncharacterized protein LOC111025053 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc11g14100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g14100.1	Moc11g14100.1	mRNA