Moc11g13960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g13960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr11: 10385109 .. 10385906 (+)
RNA-Seq Expression	Moc11g13960
Synteny	Moc11g13960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATACGAAGACATGAGGAGGCATGCTACAAAATCGGATAAAAAAGAGAATGATTGTCCTATGCCTCAAGAGGAAAATCATCAACACATTCTAAATGAGGGAGAGAATCAAGATGCCGTTGACGATACGAATGTTGAGACTGTTATGCATGCCCAACAAGAAGATTTTAATATTGATGTTGTTATTTATGATGCTGAAGAAGATGTGCATGTTGAGGTTTTGACGCGTGATGAGTACACAACCACAGAGGAGGTACTTATTGAGAAAGCGCACGAGATTACAAATACTGTACAACTTGGGGAGAGTAAGAAAAGCACGCAACTGCAAAATGCAGACCTCGGCAACACTCAGAAGCAACATTCACTCATTGCTTCATTGCCCTTGGAAAATCAAATACCATGGACTCATGGTCCAGTGTATTGGGGATTTAAACCAGGAATTTGGAAAAAGACTGCAAGGTTTTTCTTTACTACAAGCAATTACAAGTTTATCATACAAATTTATTATATTATCAACCTGTTTGAACGAGCTCAAGATGCTGAGTACAAGGTTGCATTGCAAGGAGATCCTATAGATTCGAGGACGAATCCTTCTGAAGATGGGGAGGATGATACGAACCAAGAAGCTACCTTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACATCAACAAGCTTTGCTACTTCGTGTCCAAGCGTTCTTGAACTCGACAAGAGAACAAAAGGAAGATGTGCAAGAAGTTGGAACTATGCACTTCAATTTGGTGCAAGTTATGCGTTTTTAA

mRNA sequence

ATGCTATACGAAGACATGAGGAGGCATGCTACAAAATCGGATAAAAAAGAGAATGATTGTCCTATGCCTCAAGAGGAAAATCATCAACACATTCTAAATGAGGGAGAGAATCAAGATGCCGTTGACGATACGAATGTTGAGACTGTTATGCATGCCCAACAAGAAGATTTTAATATTGATGTTGTTATTTATGATGCTGAAGAAGATGTGCATGTTGAGGTTTTGACGCGTGATGAGTACACAACCACAGAGGAGGTACTTATTGAGAAAGCGCACGAGATTACAAATACTGTACAACTTGGGGAGAGTAAGAAAAGCACGCAACTGCAAAATGCAGACCTCGGCAACACTCAGAAGCAACATTCACTCATTGCTTCATTGCCCTTGGAAAATCAAATACCATGGACTCATGGTCCAGTGTATTGGGGATTTAAACCAGGAATTTGGAAAAAGACTGCAAGGTTTTTCTTTACTACAAGCAATTACAAGTTTATCATACAAATTTATTATATTATCAACCTGTTTGAACGAGCTCAAGATGCTGAGTACAAGGTTGCATTGCAAGGAGATCCTATAGATTCGAGGACGAATCCTTCTGAAGATGGGGAGGATGATACGAACCAAGAAGCTACCTTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACATCAACAAGCTTTGCTACTTCGTGTCCAAGCGTTCTTGAACTCGACAAGAGAACAAAAGGAAGATGTGCAAGAAGTTGGAACTATGCACTTCAATTTGGTGCAAGTTATGCGTTTTTAA

Coding sequence (CDS)

ATGCTATACGAAGACATGAGGAGGCATGCTACAAAATCGGATAAAAAAGAGAATGATTGTCCTATGCCTCAAGAGGAAAATCATCAACACATTCTAAATGAGGGAGAGAATCAAGATGCCGTTGACGATACGAATGTTGAGACTGTTATGCATGCCCAACAAGAAGATTTTAATATTGATGTTGTTATTTATGATGCTGAAGAAGATGTGCATGTTGAGGTTTTGACGCGTGATGAGTACACAACCACAGAGGAGGTACTTATTGAGAAAGCGCACGAGATTACAAATACTGTACAACTTGGGGAGAGTAAGAAAAGCACGCAACTGCAAAATGCAGACCTCGGCAACACTCAGAAGCAACATTCACTCATTGCTTCATTGCCCTTGGAAAATCAAATACCATGGACTCATGGTCCAGTGTATTGGGGATTTAAACCAGGAATTTGGAAAAAGACTGCAAGGTTTTTCTTTACTACAAGCAATTACAAGTTTATCATACAAATTTATTATATTATCAACCTGTTTGAACGAGCTCAAGATGCTGAGTACAAGGTTGCATTGCAAGGAGATCCTATAGATTCGAGGACGAATCCTTCTGAAGATGGGGAGGATGATACGAACCAAGAAGCTACCTTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACATCAACAAGCTTTGCTACTTCGTGTCCAAGCGTTCTTGAACTCGACAAGAGAACAAAAGGAAGATGTGCAAGAAGTTGGAACTATGCACTTCAATTTGGTGCAAGTTATGCGTTTTTAA

Protein sequence

MLYEDMRRHATKSDKKENDCPMPQEENHQHILNEGENQDAVDDTNVETVMHAQQEDFNIDVVIYDAEEDVHVEVLTRDEYTTTEEVLIEKAHEITNTVQLGESKKSTQLQNADLGNTQKQHSLIASLPLENQIPWTHGPVYWGFKPGIWKKTARFFFTTSNYKFIIQIYYIINLFERAQDAEYKVALQGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQALLLRVQAFLNSTREQKEDVQEVGTMHFNLVQVMRF

Homology

[Close]

BLAST of Moc11g13960 vs. NCBI nr
Match: XP_022157215.1 (uncharacterized protein LOC111023977 [Momordica charantia])

HSP 1 Score: 379.8 bits (974), Expect = 1.9e-101
Identity = 194/208 (93.27%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 1   MLYEDMRRHATKSDKKENDCPMPQEENHQHILNEGENQDAVDDTNVETVMHAQQEDFNID 60
           MLYEDMRRHATKS KKENDCPMPQEENHQHI NE ENQDAVDDTNVETVMHA+QEDFNID
Sbjct: 51  MLYEDMRRHATKSVKKENDCPMPQEENHQHIPNEVENQDAVDDTNVETVMHARQEDFNID 110

Query: 61  VVIYDAEEDVHVEVLTRDEYTTTEEVLIEKAHEITNTVQLGESKKSTQLQNADLGNTQKQ 120
           VVIYDAEEDVHVEVLT DEYTT EEVLIEKA EITN VQLGESKKSTQLQNADLGNTQKQ
Sbjct: 111 VVIYDAEEDVHVEVLTPDEYTTIEEVLIEKALEITNIVQLGESKKSTQLQNADLGNTQKQ 170

Query: 121 HSLIASLPLENQIPWTHGPVYWGFKPGIWKKTARFFFTTSNYKFIIQIYYIINLFERAQD 180
           HSLIASLPL+NQIPWT GPVYWGFKP IWKKTARFFFT SNYKFIIQIYY+INLFERAQD
Sbjct: 171 HSLIASLPLKNQIPWTXGPVYWGFKPXIWKKTARFFFTXSNYKFIIQIYYLINLFERAQD 230

Query: 181 AEYKVALQGDPIDSRTNPSEDGEDDTNQ 209
           AEYKVALQGDPIDSRTNPSEDGEDD NQ
Sbjct: 231 AEYKVALQGDPIDSRTNPSEDGEDDMNQ 258

[Close]

BLAST of Moc11g13960 vs. NCBI nr
Match: XP_022158199.1 (uncharacterized protein LOC111024737 [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 4.6e-10
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 174 LFERAQDAEYKVALQGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQALLL 233
           + ER  D  YK+ L GD  DSRTNPS++ EDD NQ +T VMP GPITRSR++K QQALL 
Sbjct: 155 VLERINDNAYKIDLPGDGYDSRTNPSQEREDDVNQGSTIVMPQGPITRSRSKKLQQALLS 214

Query: 234 RVQ 237
            VQ
Sbjct: 215 YVQ 217

[Close]

BLAST of Moc11g13960 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 5.2e-06
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 183 YKVALQGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQALLLRVQAFLNST 242
           Y     GD  DSRTNPS+ GEDD NQ+A   +P GPITRSRA++ Q A    +QA ++ST
Sbjct: 478 YTFTHNGDDFDSRTNPSKGGEDDMNQDA-LALPSGPITRSRAKQLQLAFDSHIQAXVSST 537

Query: 243 REQKED 249
              +ED
Sbjct: 538 NGHQED 542

[Close]

BLAST of Moc11g13960 vs. NCBI nr
Match: XP_038900633.1 (uncharacterized protein LOC120087799 [Benincasa hispida])

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-04
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 188 QGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQALLLRVQAFLNSTREQKE 247
           QGD    RTNPS++ EDD N+  + +M  G I RSRA+K  QAL+  +QA + ST++  E
Sbjct: 78  QGDDYTPRTNPSQEEEDDANKGTSIIMSQGSIIRSRAKK-LQALITHIQAMVTSTKDIVE 137

Query: 248 DVQEVGTM 256
           DV+ +  M
Sbjct: 138 DVRVLSYM 144

[Close]

BLAST of Moc11g13960 vs. ExPASy TrEMBL
Match: A0A6J1DSH3 (uncharacterized protein LOC111023977 OS=Momordica charantia OX=3673 GN=LOC111023977 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 9.4e-102
Identity = 194/208 (93.27%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 1   MLYEDMRRHATKSDKKENDCPMPQEENHQHILNEGENQDAVDDTNVETVMHAQQEDFNID 60
           MLYEDMRRHATKS KKENDCPMPQEENHQHI NE ENQDAVDDTNVETVMHA+QEDFNID
Sbjct: 51  MLYEDMRRHATKSVKKENDCPMPQEENHQHIPNEVENQDAVDDTNVETVMHARQEDFNID 110

Query: 61  VVIYDAEEDVHVEVLTRDEYTTTEEVLIEKAHEITNTVQLGESKKSTQLQNADLGNTQKQ 120
           VVIYDAEEDVHVEVLT DEYTT EEVLIEKA EITN VQLGESKKSTQLQNADLGNTQKQ
Sbjct: 111 VVIYDAEEDVHVEVLTPDEYTTIEEVLIEKALEITNIVQLGESKKSTQLQNADLGNTQKQ 170

Query: 121 HSLIASLPLENQIPWTHGPVYWGFKPGIWKKTARFFFTTSNYKFIIQIYYIINLFERAQD 180
           HSLIASLPL+NQIPWT GPVYWGFKP IWKKTARFFFT SNYKFIIQIYY+INLFERAQD
Sbjct: 171 HSLIASLPLKNQIPWTXGPVYWGFKPXIWKKTARFFFTXSNYKFIIQIYYLINLFERAQD 230

Query: 181 AEYKVALQGDPIDSRTNPSEDGEDDTNQ 209
           AEYKVALQGDPIDSRTNPSEDGEDD NQ
Sbjct: 231 AEYKVALQGDPIDSRTNPSEDGEDDMNQ 258

[Close]

BLAST of Moc11g13960 vs. ExPASy TrEMBL
Match: A0A6J1DYP6 (uncharacterized protein LOC111024737 OS=Momordica charantia OX=3673 GN=LOC111024737 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 174 LFERAQDAEYKVALQGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQALLL 233
           + ER  D  YK+ L GD  DSRTNPS++ EDD NQ +T VMP GPITRSR++K QQALL 
Sbjct: 155 VLERINDNAYKIDLPGDGYDSRTNPSQEREDDVNQGSTIVMPQGPITRSRSKKLQQALLS 214

Query: 234 RVQ 237
            VQ
Sbjct: 215 YVQ 217

[Close]

BLAST of Moc11g13960 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.5e-06
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 183 YKVALQGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQALLLRVQAFLNST 242
           Y     GD  DSRTNPS+ GEDD NQ+A   +P GPITRSRA++ Q A    +QA ++ST
Sbjct: 478 YTFTHNGDDFDSRTNPSKGGEDDMNQDA-LALPSGPITRSRAKQLQLAFDSHIQAXVSST 537

Query: 243 REQKED 249
              +ED
Sbjct: 538 NGHQED 542

[Close]

BLAST of Moc11g13960 vs. ExPASy TrEMBL
Match: A0A6J1DCS9 (uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019551 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-04
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 171 IINLFERAQDAEYKVALQGDPIDSRTNPSEDGEDDTNQEATFVMPHGPITRSRARKHQQA 230
           II    + + A   +   GD  DSRTNPS+ G+DD NQ+A   +P  PITRSRA++ Q A
Sbjct: 513 IIEYLLQKRVANDYMLFDGDDFDSRTNPSKGGKDDMNQDA-LALPPEPITRSRAKQLQLA 572

Query: 231 LLLRVQAFLNSTREQKED 249
               +Q  ++ T   +ED
Sbjct: 573 FASHIQRVVSPTNGHQED 589

The following BLAST results are available for this feature:

BLAST of Moc11g13960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157215.1	1.9e-101	93.27	uncharacterized protein LOC111023977 [Momordica charantia]	[more]
XP_022158199.1	4.6e-10	61.90	uncharacterized protein LOC111024737 [Momordica charantia]	[more]
XP_022159097.1	5.2e-06	51.52	uncharacterized protein LOC111025539 [Momordica charantia]	[more]
XP_038900633.1	3.7e-04	45.59	uncharacterized protein LOC120087799 [Benincasa hispida]	[more]

BLAST of Moc11g13960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g13960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSH3	9.4e-102	93.27	uncharacterized protein LOC111023977 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DYP6	2.2e-10	61.90	uncharacterized protein LOC111024737 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DYV9	2.5e-06	51.52	uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DCS9	6.9e-04	41.03	uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of Moc11g13960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g13960.1	Moc11g13960.1	mRNA